RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
SNX6-207ENST00000556303 HFM1A2PYH4 1435 aa19.02■□□□□ 0.64
SNX6-207ENST00000556303 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
SNX6-207ENST00000556303 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
SNX6-207ENST00000556303 SLC26A8Q96RN1 970 aa19.01■□□□□ 0.63
SNX6-207ENST00000556303 PIP4K2BP78356 416 aa19■□□□□ 0.63
SNX6-207ENST00000556303 BCANQ96GW7 911 aa19■□□□□ 0.63
SNX6-207ENST00000556303 TBX22Q9Y458 520 aa19■□□□□ 0.63
SNX6-207ENST00000556303 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
SNX6-207ENST00000556303 MYO5BQ9ULV0 1848 aa18.97■□□□□ 0.63
SNX6-207ENST00000556303 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
SNX6-207ENST00000556303 NKTRP30414 1462 aaKnown RBP18.96■□□□□ 0.63
SNX6-207ENST00000556303 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
SNX6-207ENST00000556303 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
SNX6-207ENST00000556303 HSPA1LP34931 641 aa18.95■□□□□ 0.62
SNX6-207ENST00000556303 PROSER2Q86WR7 435 aaPredicted RBP18.95■□□□□ 0.62
SNX6-207ENST00000556303 DISP3Q9P2K9 1392 aa18.94■□□□□ 0.62
SNX6-207ENST00000556303 SPHKAPQ2M3C7 1700 aa18.94■□□□□ 0.62
SNX6-207ENST00000556303 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
SNX6-207ENST00000556303 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
SNX6-207ENST00000556303 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
SNX6-207ENST00000556303 NCOA3Q9Y6Q9 1424 aa18.92■□□□□ 0.62
SNX6-207ENST00000556303 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
SNX6-207ENST00000556303 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
SNX6-207ENST00000556303 XIRP1Q702N8 1843 aaKnown RBP18.9■□□□□ 0.62
SNX6-207ENST00000556303 TRPM2O94759 1503 aa18.9■□□□□ 0.62
SNX6-207ENST00000556303 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
SNX6-207ENST00000556303 CHD2O14647 1828 aaKnown RBP18.9■□□□□ 0.62
SNX6-207ENST00000556303 FAM135BQ49AJ0 1406 aa18.89■□□□□ 0.61
SNX6-207ENST00000556303 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
SNX6-207ENST00000556303 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
SNX6-207ENST00000556303 MSH6P52701 1360 aa18.86■□□□□ 0.61
SNX6-207ENST00000556303 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
SNX6-207ENST00000556303 CLTCL1P53675 1640 aa18.84■□□□□ 0.61
SNX6-207ENST00000556303 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
SNX6-207ENST00000556303 KIF1BO60333 1816 aa18.82■□□□□ 0.6
SNX6-207ENST00000556303 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
SNX6-207ENST00000556303 AMOTL2Q9Y2J4 779 aa18.82■□□□□ 0.6
SNX6-207ENST00000556303 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
SNX6-207ENST00000556303 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
SNX6-207ENST00000556303 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
SNX6-207ENST00000556303 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
SNX6-207ENST00000556303 CADPS2Q86UW7 1296 aa18.79■□□□□ 0.6
SNX6-207ENST00000556303 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
SNX6-207ENST00000556303 PTPRUQ92729 1446 aa18.77■□□□□ 0.6
SNX6-207ENST00000556303 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
SNX6-207ENST00000556303 SETD5Q9C0A6 1442 aa18.76■□□□□ 0.59
SNX6-207ENST00000556303 ILDR2Q71H61 639 aa18.76■□□□□ 0.59
SNX6-207ENST00000556303 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
SNX6-207ENST00000556303 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
SNX6-207ENST00000556303 MED1Q15648 1581 aaPredicted RBP18.74■□□□□ 0.59
SNX6-207ENST00000556303 METP08581 1390 aa18.74■□□□□ 0.59
SNX6-207ENST00000556303 ATF3P18847 181 aa18.74■□□□□ 0.59
SNX6-207ENST00000556303 DCCP43146 1447 aa18.74■□□□□ 0.59
SNX6-207ENST00000556303 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
SNX6-207ENST00000556303 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
SNX6-207ENST00000556303 HRCP23327 699 aa18.71■□□□□ 0.59
SNX6-207ENST00000556303 FOXD1Q16676 465 aa18.71■□□□□ 0.59
SNX6-207ENST00000556303 SOCS7O14512 581 aa18.7■□□□□ 0.58
SNX6-207ENST00000556303 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
SNX6-207ENST00000556303 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
SNX6-207ENST00000556303 SPATA31E1Q6ZUB1 1445 aa18.67■□□□□ 0.58
SNX6-207ENST00000556303 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
SNX6-207ENST00000556303 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
SNX6-207ENST00000556303 PPLO60437 1756 aa18.66■□□□□ 0.58
SNX6-207ENST00000556303 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
SNX6-207ENST00000556303 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
SNX6-207ENST00000556303 JCADQ9P266 1359 aa18.64■□□□□ 0.57
SNX6-207ENST00000556303 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
SNX6-207ENST00000556303 SETD1AO15047 1707 aaKnown RBP18.62■□□□□ 0.57
SNX6-207ENST00000556303 PHLPP1O60346 1717 aa18.61■□□□□ 0.57
SNX6-207ENST00000556303 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
SNX6-207ENST00000556303 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
SNX6-207ENST00000556303 AHDC1Q5TGY3 1603 aaPredicted RBP18.6■□□□□ 0.57
SNX6-207ENST00000556303 MST1RQ04912 1400 aa18.59■□□□□ 0.57
SNX6-207ENST00000556303 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
SNX6-207ENST00000556303 SPATA31A6Q5VVP1 1343 aa18.57■□□□□ 0.56
SNX6-207ENST00000556303 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
SNX6-207ENST00000556303 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
SNX6-207ENST00000556303 STAC3Q96MF2 364 aa18.56■□□□□ 0.56
SNX6-207ENST00000556303 IFT172Q9UG01 1749 aa18.56■□□□□ 0.56
SNX6-207ENST00000556303 TECPR2O15040 1411 aa18.56■□□□□ 0.56
SNX6-207ENST00000556303 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
SNX6-207ENST00000556303 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
SNX6-207ENST00000556303 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
SNX6-207ENST00000556303 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
SNX6-207ENST00000556303 RGS17Q9UGC6 210 aaPredicted RBP18.54■□□□□ 0.56
SNX6-207ENST00000556303 NALCNQ8IZF0 1738 aa18.53■□□□□ 0.56
SNX6-207ENST00000556303 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
SNX6-207ENST00000556303 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
SNX6-207ENST00000556303 MYOM2P54296 1465 aa18.52■□□□□ 0.56
SNX6-207ENST00000556303 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
SNX6-207ENST00000556303 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.56
SNX6-207ENST00000556303 SHPRHQ149N8 1683 aa18.49■□□□□ 0.55
SNX6-207ENST00000556303 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
SNX6-207ENST00000556303 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
SNX6-207ENST00000556303 YTHDC2Q9H6S0 1430 aaKnown RBP18.48■□□□□ 0.55
SNX6-207ENST00000556303 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
SNX6-207ENST00000556303 STK26Q9P289 416 aa18.47■□□□□ 0.55
SNX6-207ENST00000556303 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms