RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 UNC13BO14795 1591 aa20.58■□□□□ 0.88
TGFB3-204ENST00000556285 TMEM94Q12767 1356 aa20.58■□□□□ 0.88
TGFB3-204ENST00000556285 RGS17Q9UGC6 210 aaPredicted RBP20.56■□□□□ 0.88
TGFB3-204ENST00000556285 ZFYVE9O95405 1425 aa20.55■□□□□ 0.88
TGFB3-204ENST00000556285 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
TGFB3-204ENST00000556285 KCNA6P17658 529 aa20.52■□□□□ 0.88
TGFB3-204ENST00000556285 RPRD2Q5VT52 1461 aaKnown RBP20.51■□□□□ 0.87
TGFB3-204ENST00000556285 FAM135BQ49AJ0 1406 aa20.51■□□□□ 0.87
TGFB3-204ENST00000556285 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
TGFB3-204ENST00000556285 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
TGFB3-204ENST00000556285 SLC52A1Q9NWF4 448 aa20.49■□□□□ 0.87
TGFB3-204ENST00000556285 RIMS2Q9UQ26 1411 aa20.48■□□□□ 0.87
TGFB3-204ENST00000556285 PHLPP1O60346 1717 aa20.47■□□□□ 0.87
TGFB3-204ENST00000556285 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
TGFB3-204ENST00000556285 ITGAEP38570 1179 aa20.46■□□□□ 0.87
TGFB3-204ENST00000556285 ROCK1Q13464 1354 aa20.45■□□□□ 0.86
TGFB3-204ENST00000556285 PLEKHG1Q9ULL1 1385 aa20.45■□□□□ 0.86
TGFB3-204ENST00000556285 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
TGFB3-204ENST00000556285 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
TGFB3-204ENST00000556285 ADAMTS13Q76LX8 1427 aa20.43■□□□□ 0.86
TGFB3-204ENST00000556285 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
TGFB3-204ENST00000556285 BCANQ96GW7 911 aa20.42■□□□□ 0.86
TGFB3-204ENST00000556285 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
TGFB3-204ENST00000556285 NRXN3Q9Y4C0 1643 aa20.41■□□□□ 0.86
TGFB3-204ENST00000556285 POTEAQ6S8J7 498 aa20.4■□□□□ 0.86
TGFB3-204ENST00000556285 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
TGFB3-204ENST00000556285 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.85
TGFB3-204ENST00000556285 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
TGFB3-204ENST00000556285 NUP155O75694 1391 aa20.37■□□□□ 0.85
TGFB3-204ENST00000556285 MSH6P52701 1360 aa20.37■□□□□ 0.85
TGFB3-204ENST00000556285 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
TGFB3-204ENST00000556285 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
TGFB3-204ENST00000556285 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.85
TGFB3-204ENST00000556285 SLAIN2Q9P270 581 aa20.33■□□□□ 0.85
TGFB3-204ENST00000556285 LRP6O75581 1613 aa20.33■□□□□ 0.84
TGFB3-204ENST00000556285 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
TGFB3-204ENST00000556285 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
TGFB3-204ENST00000556285 TRPM2O94759 1503 aa20.3■□□□□ 0.84
TGFB3-204ENST00000556285 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
TGFB3-204ENST00000556285 AHDC1Q5TGY3 1603 aaPredicted RBP20.29■□□□□ 0.84
TGFB3-204ENST00000556285 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
TGFB3-204ENST00000556285 SHPRHQ149N8 1683 aa20.29■□□□□ 0.84
TGFB3-204ENST00000556285 SETBP1Q9Y6X0 1596 aa20.27■□□□□ 0.84
TGFB3-204ENST00000556285 JCADQ9P266 1359 aa20.26■□□□□ 0.83
TGFB3-204ENST00000556285 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
TGFB3-204ENST00000556285 RRBP1Q9P2E9 1410 aaKnown RBP20.25■□□□□ 0.83
TGFB3-204ENST00000556285 NALCNQ8IZF0 1738 aa20.24■□□□□ 0.83
TGFB3-204ENST00000556285 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
TGFB3-204ENST00000556285 PIK3R4Q99570 1358 aa20.23■□□□□ 0.83
TGFB3-204ENST00000556285 AMOTL2Q9Y2J4 779 aa20.23■□□□□ 0.83
TGFB3-204ENST00000556285 NHSL1Q5SYE7 1610 aa20.23■□□□□ 0.83
TGFB3-204ENST00000556285 KIF1BO60333 1816 aa20.22■□□□□ 0.83
TGFB3-204ENST00000556285 NAIPQ13075 1403 aa20.21■□□□□ 0.83
TGFB3-204ENST00000556285 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
TGFB3-204ENST00000556285 METP08581 1390 aa20.21■□□□□ 0.83
TGFB3-204ENST00000556285 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
TGFB3-204ENST00000556285 C19orf44Q9H6X5 657 aa20.19■□□□□ 0.82
TGFB3-204ENST00000556285 BRINP3Q76B58 766 aa20.18■□□□□ 0.82
TGFB3-204ENST00000556285 MST1RQ04912 1400 aa20.18■□□□□ 0.82
TGFB3-204ENST00000556285 ZNF326Q5BKZ1 582 aaKnown RBP20.17■□□□□ 0.82
TGFB3-204ENST00000556285 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
TGFB3-204ENST00000556285 ATF3P18847 181 aa20.14■□□□□ 0.81
TGFB3-204ENST00000556285 DCCP43146 1447 aa20.13■□□□□ 0.81
TGFB3-204ENST00000556285 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
TGFB3-204ENST00000556285 SPATA31A6Q5VVP1 1343 aa20.12■□□□□ 0.81
TGFB3-204ENST00000556285 PPLO60437 1756 aa20.12■□□□□ 0.81
TGFB3-204ENST00000556285 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
TGFB3-204ENST00000556285 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
TGFB3-204ENST00000556285 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
TGFB3-204ENST00000556285 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
TGFB3-204ENST00000556285 NUTM2BA6NNL0 878 aaPredicted RBP20.07■□□□□ 0.8
TGFB3-204ENST00000556285 NUTM2EB1AL46 878 aaPredicted RBP20.07■□□□□ 0.8
TGFB3-204ENST00000556285 NUTM2AQ8IVF1 878 aaPredicted RBP20.07■□□□□ 0.8
TGFB3-204ENST00000556285 LAMC1P11047 1609 aa20.06■□□□□ 0.8
TGFB3-204ENST00000556285 MEX3CQ5U5Q3 659 aaKnown RBP20.06■□□□□ 0.8
TGFB3-204ENST00000556285 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
TGFB3-204ENST00000556285 FOXD1Q16676 465 aa20.03■□□□□ 0.8
TGFB3-204ENST00000556285 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
TGFB3-204ENST00000556285 ROBO2Q9HCK4 1378 aa20.03■□□□□ 0.8
TGFB3-204ENST00000556285 C1orf167Q5SNV9 1468 aa20.03■□□□□ 0.8
TGFB3-204ENST00000556285 IFT172Q9UG01 1749 aa20.02■□□□□ 0.79
TGFB3-204ENST00000556285 UPF1Q92900 1129 aaKnown RBP eCLIP20.01■□□□□ 0.79
TGFB3-204ENST00000556285 AFF2P51816 1311 aa20.01■□□□□ 0.79
TGFB3-204ENST00000556285 ZNF772Q68DY9 489 aaPredicted RBP20■□□□□ 0.79
TGFB3-204ENST00000556285 PTCH1Q13635 1447 aa20■□□□□ 0.79
TGFB3-204ENST00000556285 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
TGFB3-204ENST00000556285 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
TGFB3-204ENST00000556285 RGS12O14924 1447 aa19.96■□□□□ 0.79
TGFB3-204ENST00000556285 PRAG1Q86YV5 1406 aa19.96■□□□□ 0.79
TGFB3-204ENST00000556285 RPGRIP1LQ68CZ1 1315 aa19.95■□□□□ 0.78
TGFB3-204ENST00000556285 CDK12Q9NYV4 1490 aaPredicted RBP19.94■□□□□ 0.78
TGFB3-204ENST00000556285 RXRBP28702 533 aa19.94■□□□□ 0.78
TGFB3-204ENST00000556285 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
TGFB3-204ENST00000556285 C8orf37Q96NL8 207 aa19.94■□□□□ 0.78
TGFB3-204ENST00000556285 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
TGFB3-204ENST00000556285 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
TGFB3-204ENST00000556285 SOS2Q07890 1332 aaPredicted RBP19.91■□□□□ 0.78
TGFB3-204ENST00000556285 ADGRF5Q8IZF2 1346 aa19.91■□□□□ 0.78
TGFB3-204ENST00000556285 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
TGFB3-204ENST00000556285 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms