RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
SPTLC2-204ENST00000556264 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
SPTLC2-204ENST00000556264 SPTLC1O15269 473 aa7.39□□□□□ -1.23
SPTLC2-204ENST00000556264 CSPP1Q1MSJ5 1256 aa7.39□□□□□ -1.23
SPTLC2-204ENST00000556264 ZNF710Q8N1W2 664 aa7.39□□□□□ -1.23
SPTLC2-204ENST00000556264 ZNF330Q9Y3S2 320 aaPredicted RBP7.39□□□□□ -1.23
SPTLC2-204ENST00000556264 MOXD2PA6NHM9 499 aa7.38□□□□□ -1.23
SPTLC2-204ENST00000556264 POTEJP0CG39 1038 aa7.38□□□□□ -1.23
SPTLC2-204ENST00000556264 DNAJB2P25686 324 aa7.38□□□□□ -1.23
SPTLC2-204ENST00000556264 RSBN1LQ6PCB5 846 aaPredicted RBP7.38□□□□□ -1.23
SPTLC2-204ENST00000556264 BCL2L12Q9HB09 334 aa7.38□□□□□ -1.23
SPTLC2-204ENST00000556264 NDUFV2P19404 249 aa7.37□□□□□ -1.23
SPTLC2-204ENST00000556264 PTPREP23469 700 aa7.37□□□□□ -1.23
SPTLC2-204ENST00000556264 TUSC1Q2TAM9 212 aa7.37□□□□□ -1.23
SPTLC2-204ENST00000556264 TATDN2Q93075 761 aa7.37□□□□□ -1.23
SPTLC2-204ENST00000556264 GDPD2Q9HCC8 539 aa7.37□□□□□ -1.23
SPTLC2-204ENST00000556264 PNMA3Q9UL41 463 aa7.37□□□□□ -1.23
SPTLC2-204ENST00000556264 PSDA5PKW4 1024 aaPredicted RBP7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 NBPF26B4DH59 902 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 PPP1R3GB7ZBB8 358 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 QPCTQ16769 361 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 MTMR14Q8NCE2 650 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 PLSCR2Q9NRY7 297 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 PCDHB15Q9Y5E8 787 aa7.36□□□□□ -1.23
SPTLC2-204ENST00000556264 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
SPTLC2-204ENST00000556264 LILRB3O75022 631 aa7.35□□□□□ -1.23
SPTLC2-204ENST00000556264 AP1G2O75843 785 aa7.35□□□□□ -1.23
SPTLC2-204ENST00000556264 POTEHQ6S545 545 aa7.35□□□□□ -1.23
SPTLC2-204ENST00000556264 TMEM134Q9H6X4 195 aa7.35□□□□□ -1.23
SPTLC2-204ENST00000556264 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 NUTM2BA6NNL0 878 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 NUTM2EB1AL46 878 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 GJA5P36382 358 aa7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 ABL2P42684 1182 aa7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 RTL5Q5HYW3 569 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 NUTM2DQ5VT03 806 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 NUTM2AQ8IVF1 878 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 RDH13Q8NBN7 331 aa7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 SP7Q8TDD2 431 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-204ENST00000556264 SMAPO00193 183 aa7.33□□□□□ -1.24
SPTLC2-204ENST00000556264 WWC1Q8IX03 1113 aa7.33□□□□□ -1.24
SPTLC2-204ENST00000556264 PRM3Q9NNZ6 103 aa7.33□□□□□ -1.24
SPTLC2-204ENST00000556264 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
SPTLC2-204ENST00000556264 CABLES1Q8TDN4 633 aa7.32□□□□□ -1.24
SPTLC2-204ENST00000556264 KDM4AO75164 1064 aa7.31□□□□□ -1.24
SPTLC2-204ENST00000556264 PROX2Q3B8N5 592 aa7.31□□□□□ -1.24
SPTLC2-204ENST00000556264 NECTIN2Q92692 538 aa7.31□□□□□ -1.24
SPTLC2-204ENST00000556264 TBC1D2BQ9UPU7 963 aa7.31□□□□□ -1.24
SPTLC2-204ENST00000556264 USP17L8P0C7I0 530 aa7.3□□□□□ -1.24
SPTLC2-204ENST00000556264 RSPH4AQ5TD94 716 aa7.3□□□□□ -1.24
SPTLC2-204ENST00000556264 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
SPTLC2-204ENST00000556264 SCUBE2Q9NQ36 999 aa7.3□□□□□ -1.24
SPTLC2-204ENST00000556264 SOCS7O14512 581 aa7.29□□□□□ -1.24
SPTLC2-204ENST00000556264 GCGRP47871 477 aa7.29□□□□□ -1.24
SPTLC2-204ENST00000556264 USP46P62068 366 aa7.29□□□□□ -1.24
SPTLC2-204ENST00000556264 PRPF38BQ5VTL8 546 aaKnown RBP7.29□□□□□ -1.24
SPTLC2-204ENST00000556264 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
SPTLC2-204ENST00000556264 POM121CA8CG34 1229 aa7.28□□□□□ -1.24
SPTLC2-204ENST00000556264 TRAIPQ9BWF2 469 aa7.28□□□□□ -1.24
SPTLC2-204ENST00000556264 ZBTB3Q9H5J0 574 aa7.28□□□□□ -1.24
SPTLC2-204ENST00000556264 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
SPTLC2-204ENST00000556264 HOXA2O43364 376 aa7.27□□□□□ -1.25
SPTLC2-204ENST00000556264 FDX1P10109 184 aa7.27□□□□□ -1.25
SPTLC2-204ENST00000556264 MAMSTRQ6ZN01 415 aa7.27□□□□□ -1.25
SPTLC2-204ENST00000556264 GLMNQ92990 594 aa7.27□□□□□ -1.25
SPTLC2-204ENST00000556264 PCDHGC3Q9UN70 934 aa7.27□□□□□ -1.25
SPTLC2-204ENST00000556264 SLC10A3P09131 477 aa7.26□□□□□ -1.25
SPTLC2-204ENST00000556264 HOXB1P14653 301 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-204ENST00000556264 SNPHO15079 494 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 GUCA2AQ02747 115 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 CTDSPL2Q05D32 466 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 SWT1Q5T5J6 900 aaKnown RBP7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 RETREG2Q8NC44 543 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 HLA-CQ95604 372 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 GJD4Q96KN9 370 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 KCNH8Q96L42 1107 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 NDUFB9Q9Y6M9 179 aa7.25□□□□□ -1.25
SPTLC2-204ENST00000556264 ZBED2Q9BTP6 218 aa7.24□□□□□ -1.25
SPTLC2-204ENST00000556264 ACIN1Q9UKV3 1341 aaKnown RBP7.24□□□□□ -1.25
SPTLC2-204ENST00000556264 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 PSEN2P49810 448 aa7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 IRF5Q13568 498 aa7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 HDGFL1Q5TGJ6 251 aa7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 AEBP1Q8IUX7 1158 aa7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 TSC1Q92574 1164 aa7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 HMX1Q9NP08 348 aaPredicted RBP7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 CCDC9Q9Y3X0 531 aaKnown RBP7.23□□□□□ -1.25
SPTLC2-204ENST00000556264 HDGFP51858 240 aaKnown RBP7.22□□□□□ -1.25
SPTLC2-204ENST00000556264 MTMR2Q13614 643 aa7.22□□□□□ -1.25
SPTLC2-204ENST00000556264 SEPT9Q9UHD8 586 aaPredicted RBP7.22□□□□□ -1.25
SPTLC2-204ENST00000556264 WASHC4Q2M389 1173 aa7.21□□□□□ -1.26
SPTLC2-204ENST00000556264 HELBQ8NG08 1087 aaPredicted RBP7.21□□□□□ -1.26
SPTLC2-204ENST00000556264 LRRN4Q8WUT4 740 aa7.21□□□□□ -1.26
SPTLC2-204ENST00000556264 TRIM34Q9BYJ4 488 aa7.21□□□□□ -1.26
SPTLC2-204ENST00000556264 C6orf229H3BNL8 230 aa7.2□□□□□ -1.26
SPTLC2-204ENST00000556264 ADAMTS19Q8TE59 1207 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms