RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 MYO5BQ9ULV0 1848 aa26.18■■□□□ 1.78
XRCC3-215ENST00000555964 BCANQ96GW7 911 aa26.18■■□□□ 1.78
XRCC3-215ENST00000555964 UNC13BO14795 1591 aa26.17■■□□□ 1.78
XRCC3-215ENST00000555964 PROSER2Q86WR7 435 aaPredicted RBP26.17■■□□□ 1.78
XRCC3-215ENST00000555964 SLC26A8Q96RN1 970 aa26.17■■□□□ 1.78
XRCC3-215ENST00000555964 ROBO1Q9Y6N7 1651 aa26.14■■□□□ 1.78
XRCC3-215ENST00000555964 MSH6P52701 1360 aa26.13■■□□□ 1.77
XRCC3-215ENST00000555964 PLEKHG1Q9ULL1 1385 aa26.13■■□□□ 1.77
XRCC3-215ENST00000555964 PPP1R15AO75807 674 aaPredicted RBP26.13■■□□□ 1.77
XRCC3-215ENST00000555964 ZFYVE9O95405 1425 aa26.13■■□□□ 1.77
XRCC3-215ENST00000555964 TMEM131LA2VDJ0 1609 aa26.12■■□□□ 1.77
XRCC3-215ENST00000555964 CHD2O14647 1828 aaKnown RBP26.11■■□□□ 1.77
XRCC3-215ENST00000555964 RIMS2Q9UQ26 1411 aa26.11■■□□□ 1.77
XRCC3-215ENST00000555964 ROCK1Q13464 1354 aa26.1■■□□□ 1.77
XRCC3-215ENST00000555964 IQGAP3Q86VI3 1631 aa26.08■■□□□ 1.77
XRCC3-215ENST00000555964 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.08■■□□□ 1.77
XRCC3-215ENST00000555964 E9PCH4 1651 aa26.08■■□□□ 1.77
XRCC3-215ENST00000555964 DIP2AQ14689 1571 aa26.06■■□□□ 1.76
XRCC3-215ENST00000555964 NCOA3Q9Y6Q9 1424 aa26.03■■□□□ 1.76
XRCC3-215ENST00000555964 TBX22Q9Y458 520 aa26.02■■□□□ 1.76
XRCC3-215ENST00000555964 PHLPP1O60346 1717 aa26.01■■□□□ 1.75
XRCC3-215ENST00000555964 CHGAP10645 457 aaKnown RBP26.01■■□□□ 1.75
XRCC3-215ENST00000555964 RBM33Q96EV2 1170 aaKnown RBP26.01■■□□□ 1.75
XRCC3-215ENST00000555964 PIK3R4Q99570 1358 aa25.99■■□□□ 1.75
XRCC3-215ENST00000555964 SLAIN2Q9P270 581 aa25.99■■□□□ 1.75
XRCC3-215ENST00000555964 NUP155O75694 1391 aa25.96■■□□□ 1.75
XRCC3-215ENST00000555964 RGS17Q9UGC6 210 aaPredicted RBP25.96■■□□□ 1.75
XRCC3-215ENST00000555964 C14orf37Q86TY3 774 aa25.95■■□□□ 1.74
XRCC3-215ENST00000555964 TRPM2O94759 1503 aa25.94■■□□□ 1.74
XRCC3-215ENST00000555964 ADAMTS13Q76LX8 1427 aa25.94■■□□□ 1.74
XRCC3-215ENST00000555964 JCADQ9P266 1359 aa25.94■■□□□ 1.74
XRCC3-215ENST00000555964 CADPS2Q86UW7 1296 aa25.91■■□□□ 1.74
XRCC3-215ENST00000555964 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
XRCC3-215ENST00000555964 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.9■■□□□ 1.74
XRCC3-215ENST00000555964 COL16A1Q07092 1604 aaPredicted RBP25.88■■□□□ 1.73
XRCC3-215ENST00000555964 ATF3P18847 181 aa25.88■■□□□ 1.73
XRCC3-215ENST00000555964 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
XRCC3-215ENST00000555964 ITGAEP38570 1179 aa25.87■■□□□ 1.73
XRCC3-215ENST00000555964 NUTM2DQ5VT03 806 aaPredicted RBP25.86■■□□□ 1.73
XRCC3-215ENST00000555964 AHDC1Q5TGY3 1603 aaPredicted RBP25.85■■□□□ 1.73
XRCC3-215ENST00000555964 SETBP1Q9Y6X0 1596 aa25.83■■□□□ 1.73
XRCC3-215ENST00000555964 POTEAQ6S8J7 498 aa25.83■■□□□ 1.73
XRCC3-215ENST00000555964 DCCP43146 1447 aa25.82■■□□□ 1.72
XRCC3-215ENST00000555964 SPATA31A6Q5VVP1 1343 aa25.82■■□□□ 1.72
XRCC3-215ENST00000555964 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
XRCC3-215ENST00000555964 SHPRHQ149N8 1683 aa25.8■■□□□ 1.72
XRCC3-215ENST00000555964 XRN1Q8IZH2 1706 aaKnown RBP25.8■■□□□ 1.72
XRCC3-215ENST00000555964 NRXN3Q9Y4C0 1643 aa25.79■■□□□ 1.72
XRCC3-215ENST00000555964 ZNF326Q5BKZ1 582 aaKnown RBP25.78■■□□□ 1.72
XRCC3-215ENST00000555964 KIF1BO60333 1816 aa25.77■■□□□ 1.72
XRCC3-215ENST00000555964 MEX3CQ5U5Q3 659 aaKnown RBP25.76■■□□□ 1.71
XRCC3-215ENST00000555964 PTPRUQ92729 1446 aa25.76■■□□□ 1.71
XRCC3-215ENST00000555964 ZNF772Q68DY9 489 aaPredicted RBP25.72■■□□□ 1.71
XRCC3-215ENST00000555964 CLTCL1P53675 1640 aa25.72■■□□□ 1.71
XRCC3-215ENST00000555964 LRP6O75581 1613 aa25.7■■□□□ 1.71
XRCC3-215ENST00000555964 NEXMIFQ5QGS0 1516 aa25.7■■□□□ 1.7
XRCC3-215ENST00000555964 BRINP3Q76B58 766 aa25.7■■□□□ 1.7
XRCC3-215ENST00000555964 SETD1AO15047 1707 aaKnown RBP25.7■■□□□ 1.7
XRCC3-215ENST00000555964 RRBP1Q9P2E9 1410 aaKnown RBP25.7■■□□□ 1.7
XRCC3-215ENST00000555964 ASXL1Q8IXJ9 1541 aa25.69■■□□□ 1.7
XRCC3-215ENST00000555964 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
XRCC3-215ENST00000555964 NHSL1Q5SYE7 1610 aa25.67■■□□□ 1.7
XRCC3-215ENST00000555964 ADGRL3Q9HAR2 1447 aa25.66■■□□□ 1.7
XRCC3-215ENST00000555964 METP08581 1390 aa25.66■■□□□ 1.7
XRCC3-215ENST00000555964 MST1RQ04912 1400 aa25.65■■□□□ 1.7
XRCC3-215ENST00000555964 NAIPQ13075 1403 aa25.64■■□□□ 1.7
XRCC3-215ENST00000555964 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
XRCC3-215ENST00000555964 NALCNQ8IZF0 1738 aa25.62■■□□□ 1.69
XRCC3-215ENST00000555964 VGFO15240 615 aaPredicted RBP25.59■■□□□ 1.69
XRCC3-215ENST00000555964 LRRC59Q96AG4 307 aaKnown RBP25.59■■□□□ 1.69
XRCC3-215ENST00000555964 PTCH1Q13635 1447 aa25.59■■□□□ 1.69
XRCC3-215ENST00000555964 HFM1A2PYH4 1435 aa25.56■■□□□ 1.68
XRCC3-215ENST00000555964 NUTM2BA6NNL0 878 aaPredicted RBP25.56■■□□□ 1.68
XRCC3-215ENST00000555964 NUTM2EB1AL46 878 aaPredicted RBP25.56■■□□□ 1.68
XRCC3-215ENST00000555964 NUTM2AQ8IVF1 878 aaPredicted RBP25.56■■□□□ 1.68
XRCC3-215ENST00000555964 RPGRIP1LQ68CZ1 1315 aa25.56■■□□□ 1.68
XRCC3-215ENST00000555964 TRIM52Q96A61 297 aa25.55■■□□□ 1.68
XRCC3-215ENST00000555964 CDK12Q9NYV4 1490 aaPredicted RBP25.54■■□□□ 1.68
XRCC3-215ENST00000555964 RXRBP28702 533 aa25.54■■□□□ 1.68
XRCC3-215ENST00000555964 PPLO60437 1756 aa25.53■■□□□ 1.68
XRCC3-215ENST00000555964 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
XRCC3-215ENST00000555964 LAMC1P11047 1609 aa25.51■■□□□ 1.67
XRCC3-215ENST00000555964 AFF2P51816 1311 aa25.5■■□□□ 1.67
XRCC3-215ENST00000555964 C1orf167Q5SNV9 1468 aa25.5■■□□□ 1.67
XRCC3-215ENST00000555964 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
XRCC3-215ENST00000555964 PNPLA6Q8IY17 1366 aa25.49■■□□□ 1.67
XRCC3-215ENST00000555964 ROBO2Q9HCK4 1378 aa25.45■■□□□ 1.67
XRCC3-215ENST00000555964 UPF1Q92900 1129 aaKnown RBP eCLIP25.44■■□□□ 1.66
XRCC3-215ENST00000555964 C8orf37Q96NL8 207 aa25.44■■□□□ 1.66
XRCC3-215ENST00000555964 DDX17Q92841 729 aaKnown RBP25.42■■□□□ 1.66
XRCC3-215ENST00000555964 CDC42BPGQ6DT37 1551 aa25.4■■□□□ 1.66
XRCC3-215ENST00000555964 CCDC144AA2RUR9 1427 aa25.4■■□□□ 1.66
XRCC3-215ENST00000555964 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
XRCC3-215ENST00000555964 RBM6P78332 1123 aaKnown RBP25.39■■□□□ 1.66
XRCC3-215ENST00000555964 NGLY1Q96IV0 654 aa25.37■■□□□ 1.65
XRCC3-215ENST00000555964 QTRT2Q9H974 415 aaKnown RBP25.37■■□□□ 1.65
XRCC3-215ENST00000555964 ANKRD30BQ9BXX2 1392 aa25.35■■□□□ 1.65
XRCC3-215ENST00000555964 COL22A1Q8NFW1 1626 aaPredicted RBP25.35■■□□□ 1.65
XRCC3-215ENST00000555964 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
XRCC3-215ENST00000555964 NPHP3Q7Z494 1330 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms