RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SOCS7O14512 581 aa30.25■■■□□ 2.43
PRKCH-219ENST00000555906 PLEKHG1Q9ULL1 1385 aa30.25■■■□□ 2.43
PRKCH-219ENST00000555906 RIMS2Q9UQ26 1411 aa30.24■■■□□ 2.43
PRKCH-219ENST00000555906 KCNA6P17658 529 aa30.23■■■□□ 2.43
PRKCH-219ENST00000555906 CHD2O14647 1828 aaKnown RBP30.22■■■□□ 2.43
PRKCH-219ENST00000555906 SLC26A8Q96RN1 970 aa30.22■■■□□ 2.43
PRKCH-219ENST00000555906 TMEM94Q12767 1356 aa30.22■■■□□ 2.43
PRKCH-219ENST00000555906 SPHKAPQ2M3C7 1700 aa30.2■■■□□ 2.43
PRKCH-219ENST00000555906 NUP155O75694 1391 aa30.19■■■□□ 2.42
PRKCH-219ENST00000555906 DIP2AQ14689 1571 aa30.19■■■□□ 2.42
PRKCH-219ENST00000555906 ITGAEP38570 1179 aa30.18■■■□□ 2.42
PRKCH-219ENST00000555906 RRBP1Q9P2E9 1410 aaKnown RBP30.18■■■□□ 2.42
PRKCH-219ENST00000555906 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
PRKCH-219ENST00000555906 HDGFP51858 240 aaKnown RBP30.15■■■□□ 2.42
PRKCH-219ENST00000555906 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.42
PRKCH-219ENST00000555906 ROBO1Q9Y6N7 1651 aa30.13■■■□□ 2.41
PRKCH-219ENST00000555906 FAM135BQ49AJ0 1406 aa30.13■■■□□ 2.41
PRKCH-219ENST00000555906 BCANQ96GW7 911 aa30.12■■■□□ 2.41
PRKCH-219ENST00000555906 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.11■■■□□ 2.41
PRKCH-219ENST00000555906 PROSER2Q86WR7 435 aaPredicted RBP30.1■■■□□ 2.41
PRKCH-219ENST00000555906 ADAMTS13Q76LX8 1427 aa30.08■■■□□ 2.41
PRKCH-219ENST00000555906 CHGAP10645 457 aaKnown RBP30.08■■■□□ 2.41
PRKCH-219ENST00000555906 MSH6P52701 1360 aa30.06■■■□□ 2.4
PRKCH-219ENST00000555906 SENP3Q9H4L4 574 aaPredicted RBP30.06■■■□□ 2.4
PRKCH-219ENST00000555906 TBX22Q9Y458 520 aa30.05■■■□□ 2.4
PRKCH-219ENST00000555906 TRPM2O94759 1503 aa30.05■■■□□ 2.4
PRKCH-219ENST00000555906 PIK3R4Q99570 1358 aa30.03■■■□□ 2.4
PRKCH-219ENST00000555906 NAIPQ13075 1403 aa30.03■■■□□ 2.4
PRKCH-219ENST00000555906 RBM33Q96EV2 1170 aaKnown RBP30.02■■■□□ 2.4
PRKCH-219ENST00000555906 NRXN3Q9Y4C0 1643 aa30.02■■■□□ 2.4
PRKCH-219ENST00000555906 NCOA3Q9Y6Q9 1424 aa30.02■■■□□ 2.4
PRKCH-219ENST00000555906 CLTCL1P53675 1640 aa30.01■■■□□ 2.39
PRKCH-219ENST00000555906 SETBP1Q9Y6X0 1596 aa30.01■■■□□ 2.39
PRKCH-219ENST00000555906 PHF23Q9BUL5 403 aaPredicted RBP29.99■■■□□ 2.39
PRKCH-219ENST00000555906 XRN1Q8IZH2 1706 aaKnown RBP29.96■■■□□ 2.39
PRKCH-219ENST00000555906 KIF1BO60333 1816 aa29.96■■■□□ 2.39
PRKCH-219ENST00000555906 NUTM2DQ5VT03 806 aaPredicted RBP29.96■■■□□ 2.39
PRKCH-219ENST00000555906 PHLPP1O60346 1717 aa29.95■■■□□ 2.38
PRKCH-219ENST00000555906 HFM1A2PYH4 1435 aa29.95■■■□□ 2.38
PRKCH-219ENST00000555906 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.94■■■□□ 2.38
PRKCH-219ENST00000555906 NEXMIFQ5QGS0 1516 aa29.93■■■□□ 2.38
PRKCH-219ENST00000555906 PTPRUQ92729 1446 aa29.89■■■□□ 2.38
PRKCH-219ENST00000555906 SLAIN2Q9P270 581 aa29.88■■■□□ 2.37
PRKCH-219ENST00000555906 COL16A1Q07092 1604 aaPredicted RBP29.87■■■□□ 2.37
PRKCH-219ENST00000555906 AHDC1Q5TGY3 1603 aaPredicted RBP29.83■■■□□ 2.37
PRKCH-219ENST00000555906 DCCP43146 1447 aa29.83■■■□□ 2.37
PRKCH-219ENST00000555906 ZNF326Q5BKZ1 582 aaKnown RBP29.83■■■□□ 2.37
PRKCH-219ENST00000555906 C14orf37Q86TY3 774 aa29.82■■■□□ 2.36
PRKCH-219ENST00000555906 AMOTL2Q9Y2J4 779 aa29.81■■■□□ 2.36
PRKCH-219ENST00000555906 CADPS2Q86UW7 1296 aa29.8■■■□□ 2.36
PRKCH-219ENST00000555906 C19orf44Q9H6X5 657 aa29.8■■■□□ 2.36
PRKCH-219ENST00000555906 SETD1AO15047 1707 aaKnown RBP29.79■■■□□ 2.36
PRKCH-219ENST00000555906 JCADQ9P266 1359 aa29.77■■■□□ 2.36
PRKCH-219ENST00000555906 METP08581 1390 aa29.77■■■□□ 2.36
PRKCH-219ENST00000555906 RGS17Q9UGC6 210 aaPredicted RBP29.76■■■□□ 2.35
PRKCH-219ENST00000555906 PPLO60437 1756 aa29.75■■■□□ 2.35
PRKCH-219ENST00000555906 ATF3P18847 181 aa29.75■■■□□ 2.35
PRKCH-219ENST00000555906 SHPRHQ149N8 1683 aa29.75■■■□□ 2.35
PRKCH-219ENST00000555906 NALCNQ8IZF0 1738 aa29.74■■■□□ 2.35
PRKCH-219ENST00000555906 TRIM52Q96A61 297 aa29.73■■■□□ 2.35
PRKCH-219ENST00000555906 ASXL1Q8IXJ9 1541 aa29.7■■■□□ 2.34
PRKCH-219ENST00000555906 ADGRL3Q9HAR2 1447 aa29.7■■■□□ 2.34
PRKCH-219ENST00000555906 SLC4A1APQ9BWU0 796 aaKnown RBP29.69■■■□□ 2.34
PRKCH-219ENST00000555906 NHSL1Q5SYE7 1610 aa29.69■■■□□ 2.34
PRKCH-219ENST00000555906 MST1RQ04912 1400 aa29.68■■■□□ 2.34
PRKCH-219ENST00000555906 PTCH1Q13635 1447 aa29.67■■■□□ 2.34
PRKCH-219ENST00000555906 PRAG1Q86YV5 1406 aa29.67■■■□□ 2.34
PRKCH-219ENST00000555906 RPGRIP1LQ68CZ1 1315 aa29.64■■■□□ 2.34
PRKCH-219ENST00000555906 LRP6O75581 1613 aa29.63■■■□□ 2.33
PRKCH-219ENST00000555906 BRINP3Q76B58 766 aa29.63■■■□□ 2.33
PRKCH-219ENST00000555906 VGFO15240 615 aaPredicted RBP29.62■■■□□ 2.33
PRKCH-219ENST00000555906 SPATA31A6Q5VVP1 1343 aa29.62■■■□□ 2.33
PRKCH-219ENST00000555906 IFT172Q9UG01 1749 aa29.62■■■□□ 2.33
PRKCH-219ENST00000555906 CCDC144AA2RUR9 1427 aa29.58■■■□□ 2.33
PRKCH-219ENST00000555906 POTEAQ6S8J7 498 aa29.58■■■□□ 2.33
PRKCH-219ENST00000555906 SETD5Q9C0A6 1442 aa29.55■■■□□ 2.32
PRKCH-219ENST00000555906 LAMC1P11047 1609 aa29.55■■■□□ 2.32
PRKCH-219ENST00000555906 ROBO2Q9HCK4 1378 aa29.53■■■□□ 2.32
PRKCH-219ENST00000555906 SPATA31E1Q6ZUB1 1445 aa29.53■■■□□ 2.32
PRKCH-219ENST00000555906 FOXD1Q16676 465 aa29.52■■■□□ 2.32
PRKCH-219ENST00000555906 C1orf167Q5SNV9 1468 aa29.49■■■□□ 2.31
PRKCH-219ENST00000555906 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
PRKCH-219ENST00000555906 CDC42BPGQ6DT37 1551 aa29.47■■■□□ 2.31
PRKCH-219ENST00000555906 MPHOSPH9Q99550 1183 aa29.47■■■□□ 2.31
PRKCH-219ENST00000555906 MEX3CQ5U5Q3 659 aaKnown RBP29.46■■■□□ 2.31
PRKCH-219ENST00000555906 ANKRD30BQ9BXX2 1392 aa29.46■■■□□ 2.31
PRKCH-219ENST00000555906 ACIN1Q9UKV3 1341 aaKnown RBP29.45■■■□□ 2.31
PRKCH-219ENST00000555906 TECPR2O15040 1411 aa29.43■■■□□ 2.3
PRKCH-219ENST00000555906 PIK3C2GO75747 1445 aa29.41■■■□□ 2.3
PRKCH-219ENST00000555906 ADGRF5Q8IZF2 1346 aa29.41■■■□□ 2.3
PRKCH-219ENST00000555906 ZNF772Q68DY9 489 aaPredicted RBP29.4■■■□□ 2.3
PRKCH-219ENST00000555906 LRRC59Q96AG4 307 aaKnown RBP29.4■■■□□ 2.3
PRKCH-219ENST00000555906 PNPLA6Q8IY17 1366 aa29.39■■■□□ 2.3
PRKCH-219ENST00000555906 DDX17Q92841 729 aaKnown RBP29.36■■■□□ 2.29
PRKCH-219ENST00000555906 RGL3Q3MIN7 710 aa29.35■■■□□ 2.29
PRKCH-219ENST00000555906 LRPPRCP42704 1394 aaKnown RBP29.35■■■□□ 2.29
PRKCH-219ENST00000555906 NUTM2BA6NNL0 878 aaPredicted RBP29.34■■■□□ 2.29
PRKCH-219ENST00000555906 NUTM2EB1AL46 878 aaPredicted RBP29.34■■■□□ 2.29
PRKCH-219ENST00000555906 NUTM2AQ8IVF1 878 aaPredicted RBP29.34■■■□□ 2.29
PRKCH-219ENST00000555906 MYOM2P54296 1465 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms