RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 NEURL4Q96JN8 1562 aa25.21■■□□□ 1.63
XRCC3-214ENST00000555832 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
XRCC3-214ENST00000555832 IQGAP1P46940 1657 aa25.19■■□□□ 1.62
XRCC3-214ENST00000555832 CERKQ8TCT0 537 aa25.17■■□□□ 1.62
XRCC3-214ENST00000555832 ZFYVE9O95405 1425 aa25.17■■□□□ 1.62
XRCC3-214ENST00000555832 PLEKHG1Q9ULL1 1385 aa25.17■■□□□ 1.62
XRCC3-214ENST00000555832 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
XRCC3-214ENST00000555832 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
XRCC3-214ENST00000555832 ZNF335Q9H4Z2 1342 aaPredicted RBP25.14■■□□□ 1.62
XRCC3-214ENST00000555832 KIF1BO60333 1816 aa25.14■■□□□ 1.62
XRCC3-214ENST00000555832 CPS1P31327 1500 aa25.1■■□□□ 1.61
XRCC3-214ENST00000555832 SLC26A8Q96RN1 970 aa25.09■■□□□ 1.61
XRCC3-214ENST00000555832 TBX22Q9Y458 520 aa25.09■■□□□ 1.61
XRCC3-214ENST00000555832 MYO5BQ9ULV0 1848 aa25.08■■□□□ 1.61
XRCC3-214ENST00000555832 NUTM2DQ5VT03 806 aaPredicted RBP25.08■■□□□ 1.61
XRCC3-214ENST00000555832 ANKRD30BQ9BXX2 1392 aa25.06■■□□□ 1.6
XRCC3-214ENST00000555832 RGL3Q3MIN7 710 aa25.06■■□□□ 1.6
XRCC3-214ENST00000555832 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
XRCC3-214ENST00000555832 LTBP4Q8N2S1 1624 aa25.04■■□□□ 1.6
XRCC3-214ENST00000555832 KCNA6P17658 529 aa25.04■■□□□ 1.6
XRCC3-214ENST00000555832 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
XRCC3-214ENST00000555832 DIP2AQ14689 1571 aa25.02■■□□□ 1.6
XRCC3-214ENST00000555832 FBXO41Q8TF61 875 aa25.02■■□□□ 1.6
XRCC3-214ENST00000555832 STAC3Q96MF2 364 aa25.01■■□□□ 1.59
XRCC3-214ENST00000555832 SPATA31E1Q6ZUB1 1445 aa25■■□□□ 1.59
XRCC3-214ENST00000555832 NEXMIFQ5QGS0 1516 aa25■■□□□ 1.59
XRCC3-214ENST00000555832 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
XRCC3-214ENST00000555832 PROSER2Q86WR7 435 aaPredicted RBP24.95■■□□□ 1.58
XRCC3-214ENST00000555832 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
XRCC3-214ENST00000555832 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.58
XRCC3-214ENST00000555832 NKTRP30414 1462 aaKnown RBP24.93■■□□□ 1.58
XRCC3-214ENST00000555832 TOM1O60784 492 aa24.92■■□□□ 1.58
XRCC3-214ENST00000555832 UBAP1LF5GYI3 381 aa24.89■■□□□ 1.58
XRCC3-214ENST00000555832 AMOTL2Q9Y2J4 779 aa24.89■■□□□ 1.58
XRCC3-214ENST00000555832 PPLO60437 1756 aa24.88■■□□□ 1.57
XRCC3-214ENST00000555832 LRRC7Q96NW7 1537 aa24.88■■□□□ 1.57
XRCC3-214ENST00000555832 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
XRCC3-214ENST00000555832 NWD1Q149M9 1564 aa24.86■■□□□ 1.57
XRCC3-214ENST00000555832 DCAF11Q8TEB1 546 aa24.86■■□□□ 1.57
XRCC3-214ENST00000555832 ADGRF5Q8IZF2 1346 aa24.86■■□□□ 1.57
XRCC3-214ENST00000555832 MYOM2P54296 1465 aa24.85■■□□□ 1.57
XRCC3-214ENST00000555832 DHX57Q6P158 1386 aaKnown RBP24.85■■□□□ 1.57
XRCC3-214ENST00000555832 C14orf37Q86TY3 774 aa24.85■■□□□ 1.57
XRCC3-214ENST00000555832 NCOA3Q9Y6Q9 1424 aa24.85■■□□□ 1.57
XRCC3-214ENST00000555832 TMEM94Q12767 1356 aa24.84■■□□□ 1.57
XRCC3-214ENST00000555832 ILDR1Q86SU0 546 aaPredicted RBP24.82■■□□□ 1.56
XRCC3-214ENST00000555832 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
XRCC3-214ENST00000555832 CHD2O14647 1828 aaKnown RBP24.82■■□□□ 1.56
XRCC3-214ENST00000555832 METP08581 1390 aa24.81■■□□□ 1.56
XRCC3-214ENST00000555832 MSH6P52701 1360 aa24.81■■□□□ 1.56
XRCC3-214ENST00000555832 PIK3C2GO75747 1445 aa24.8■■□□□ 1.56
XRCC3-214ENST00000555832 ALKQ9UM73 1620 aa24.8■■□□□ 1.56
XRCC3-214ENST00000555832 NRXN3Q9Y4C0 1643 aa24.8■■□□□ 1.56
XRCC3-214ENST00000555832 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
XRCC3-214ENST00000555832 C14orf93Q9H972 538 aaKnown RBP24.78■■□□□ 1.56
XRCC3-214ENST00000555832 IFT172Q9UG01 1749 aa24.78■■□□□ 1.56
XRCC3-214ENST00000555832 NEUROD1Q13562 356 aa24.77■■□□□ 1.56
XRCC3-214ENST00000555832 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
XRCC3-214ENST00000555832 C19orf44Q9H6X5 657 aa24.75■■□□□ 1.55
XRCC3-214ENST00000555832 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
XRCC3-214ENST00000555832 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
XRCC3-214ENST00000555832 LAMC1P11047 1609 aa24.73■■□□□ 1.55
XRCC3-214ENST00000555832 ATF3P18847 181 aa24.73■■□□□ 1.55
XRCC3-214ENST00000555832 CADPS2Q86UW7 1296 aa24.73■■□□□ 1.55
XRCC3-214ENST00000555832 PTCH1Q13635 1447 aa24.71■■□□□ 1.55
XRCC3-214ENST00000555832 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
XRCC3-214ENST00000555832 PIP4K2BP78356 416 aa24.71■■□□□ 1.55
XRCC3-214ENST00000555832 CFAP70Q5T0N1 1121 aa24.71■■□□□ 1.55
XRCC3-214ENST00000555832 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
XRCC3-214ENST00000555832 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
XRCC3-214ENST00000555832 PRAG1Q86YV5 1406 aa24.69■■□□□ 1.54
XRCC3-214ENST00000555832 XRN1Q8IZH2 1706 aaKnown RBP24.69■■□□□ 1.54
XRCC3-214ENST00000555832 CLSPNQ9HAW4 1339 aa24.69■■□□□ 1.54
XRCC3-214ENST00000555832 STK26Q9P289 416 aa24.69■■□□□ 1.54
XRCC3-214ENST00000555832 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
XRCC3-214ENST00000555832 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
XRCC3-214ENST00000555832 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
XRCC3-214ENST00000555832 SIRT1Q96EB6 747 aa24.67■■□□□ 1.54
XRCC3-214ENST00000555832 L3MBTL2Q969R5 705 aa24.66■■□□□ 1.54
XRCC3-214ENST00000555832 DCCP43146 1447 aa24.66■■□□□ 1.54
XRCC3-214ENST00000555832 YTHDC2Q9H6S0 1430 aaKnown RBP24.66■■□□□ 1.54
XRCC3-214ENST00000555832 SETD1AO15047 1707 aaKnown RBP24.64■■□□□ 1.54
XRCC3-214ENST00000555832 SLAIN2Q9P270 581 aa24.64■■□□□ 1.54
XRCC3-214ENST00000555832 TECPR2O15040 1411 aa24.63■■□□□ 1.53
XRCC3-214ENST00000555832 ROBO2Q9HCK4 1378 aa24.62■■□□□ 1.53
XRCC3-214ENST00000555832 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
XRCC3-214ENST00000555832 POGKQ9P215 609 aa24.61■■□□□ 1.53
XRCC3-214ENST00000555832 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
XRCC3-214ENST00000555832 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
XRCC3-214ENST00000555832 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
XRCC3-214ENST00000555832 TIMELESSQ9UNS1 1208 aa24.56■■□□□ 1.52
XRCC3-214ENST00000555832 TRAK1Q9UPV9 953 aa24.54■■□□□ 1.52
XRCC3-214ENST00000555832 KNDC1Q76NI1 1749 aa24.54■■□□□ 1.52
XRCC3-214ENST00000555832 ASXL1Q8IXJ9 1541 aa24.54■■□□□ 1.52
XRCC3-214ENST00000555832 DLC1Q96QB1 1528 aa24.53■■□□□ 1.52
XRCC3-214ENST00000555832 WAPLQ7Z5K2 1190 aa24.53■■□□□ 1.52
XRCC3-214ENST00000555832 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
XRCC3-214ENST00000555832 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.52■■□□□ 1.52
XRCC3-214ENST00000555832 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
XRCC3-214ENST00000555832 ADGRB1O14514 1584 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms