RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
PRKCH-217ENST00000555604 PPP1R15AO75807 674 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-217ENST00000555604 CFAP65Q6ZU64 1925 aaKnown RBP9.6□□□□□ -0.87
PRKCH-217ENST00000555604 CLTCL1P53675 1640 aa9.6□□□□□ -0.87
PRKCH-217ENST00000555604 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
PRKCH-217ENST00000555604 NPHP4O75161 1426 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-217ENST00000555604 SPATA31E1Q6ZUB1 1445 aa9.59□□□□□ -0.87
PRKCH-217ENST00000555604 LTKP29376 864 aa9.59□□□□□ -0.87
PRKCH-217ENST00000555604 PLEKHG1Q9ULL1 1385 aa9.59□□□□□ -0.87
PRKCH-217ENST00000555604 KIF1BO60333 1816 aa9.57□□□□□ -0.88
PRKCH-217ENST00000555604 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
PRKCH-217ENST00000555604 STRCQ7RTU9 1775 aa9.56□□□□□ -0.88
PRKCH-217ENST00000555604 PIK3R4Q99570 1358 aa9.56□□□□□ -0.88
PRKCH-217ENST00000555604 RGL3Q3MIN7 710 aa9.55□□□□□ -0.88
PRKCH-217ENST00000555604 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
PRKCH-217ENST00000555604 POLR1AO95602 1720 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-217ENST00000555604 BCANQ96GW7 911 aa9.54□□□□□ -0.88
PRKCH-217ENST00000555604 NEXMIFQ5QGS0 1516 aa9.54□□□□□ -0.88
PRKCH-217ENST00000555604 DIP2AQ14689 1571 aa9.54□□□□□ -0.88
PRKCH-217ENST00000555604 MYOM2P54296 1465 aa9.53□□□□□ -0.88
PRKCH-217ENST00000555604 IQGAP1P46940 1657 aa9.53□□□□□ -0.88
PRKCH-217ENST00000555604 SETBP1Q9Y6X0 1596 aa9.53□□□□□ -0.88
PRKCH-217ENST00000555604 KCNA6P17658 529 aa9.51□□□□□ -0.89
PRKCH-217ENST00000555604 DCAF11Q8TEB1 546 aa9.51□□□□□ -0.89
PRKCH-217ENST00000555604 NRXN1Q9ULB1 1477 aa9.51□□□□□ -0.89
PRKCH-217ENST00000555604 CPS1P31327 1500 aa9.51□□□□□ -0.89
PRKCH-217ENST00000555604 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
PRKCH-217ENST00000555604 ADAMTS13Q76LX8 1427 aa9.5□□□□□ -0.89
PRKCH-217ENST00000555604 CCER1Q8TC90 406 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-217ENST00000555604 SLC26A8Q96RN1 970 aa9.5□□□□□ -0.89
PRKCH-217ENST00000555604 C14orf93Q9H972 538 aaKnown RBP9.5□□□□□ -0.89
PRKCH-217ENST00000555604 MYO5BQ9ULV0 1848 aa9.49□□□□□ -0.89
PRKCH-217ENST00000555604 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
PRKCH-217ENST00000555604 NUTM2DQ5VT03 806 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-217ENST00000555604 SIN3AQ96ST3 1273 aa9.49□□□□□ -0.89
PRKCH-217ENST00000555604 PPLO60437 1756 aa9.49□□□□□ -0.89
PRKCH-217ENST00000555604 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
PRKCH-217ENST00000555604 TONSLQ96HA7 1378 aa9.49□□□□□ -0.89
PRKCH-217ENST00000555604 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
PRKCH-217ENST00000555604 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
PRKCH-217ENST00000555604 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
PRKCH-217ENST00000555604 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
PRKCH-217ENST00000555604 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
PRKCH-217ENST00000555604 KDM2AQ9Y2K7 1162 aa9.47□□□□□ -0.89
PRKCH-217ENST00000555604 ZNF335Q9H4Z2 1342 aaPredicted RBP9.47□□□□□ -0.89
PRKCH-217ENST00000555604 IFT172Q9UG01 1749 aa9.47□□□□□ -0.89
PRKCH-217ENST00000555604 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
PRKCH-217ENST00000555604 ALKQ9UM73 1620 aa9.46□□□□□ -0.89
PRKCH-217ENST00000555604 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.9
PRKCH-217ENST00000555604 LAMC1P11047 1609 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 CERKQ8TCT0 537 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 METP08581 1390 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 ABCC11Q96J66 1382 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 NWD1Q149M9 1564 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 LTBP4Q8N2S1 1624 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 NRXN3Q9Y4C0 1643 aa9.45□□□□□ -0.9
PRKCH-217ENST00000555604 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
PRKCH-217ENST00000555604 PROSER2Q86WR7 435 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-217ENST00000555604 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
PRKCH-217ENST00000555604 TECPR2O15040 1411 aa9.43□□□□□ -0.9
PRKCH-217ENST00000555604 PTCH1Q13635 1447 aa9.43□□□□□ -0.9
PRKCH-217ENST00000555604 FAM135BQ49AJ0 1406 aa9.42□□□□□ -0.9
PRKCH-217ENST00000555604 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
PRKCH-217ENST00000555604 LRRC7Q96NW7 1537 aa9.41□□□□□ -0.9
PRKCH-217ENST00000555604 PTPRUQ92729 1446 aa9.41□□□□□ -0.9
PRKCH-217ENST00000555604 YTHDC2Q9H6S0 1430 aaKnown RBP9.41□□□□□ -0.9
PRKCH-217ENST00000555604 CHD2O14647 1828 aaKnown RBP9.41□□□□□ -0.9
PRKCH-217ENST00000555604 SLC24A1O60721 1099 aa9.41□□□□□ -0.9
PRKCH-217ENST00000555604 C19orf44Q9H6X5 657 aa9.41□□□□□ -0.9
PRKCH-217ENST00000555604 TMEM94Q12767 1356 aa9.4□□□□□ -0.9
PRKCH-217ENST00000555604 TOM1O60784 492 aa9.4□□□□□ -0.9
PRKCH-217ENST00000555604 DLC1Q96QB1 1528 aa9.4□□□□□ -0.91
PRKCH-217ENST00000555604 DCCP43146 1447 aa9.39□□□□□ -0.91
PRKCH-217ENST00000555604 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
PRKCH-217ENST00000555604 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
PRKCH-217ENST00000555604 MSH6P52701 1360 aa9.39□□□□□ -0.91
PRKCH-217ENST00000555604 ADGRB1O14514 1584 aa9.39□□□□□ -0.91
PRKCH-217ENST00000555604 TMEM132EQ6IEE7 984 aa9.39□□□□□ -0.91
PRKCH-217ENST00000555604 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
PRKCH-217ENST00000555604 SENP3Q9H4L4 574 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-217ENST00000555604 ROCK2O75116 1388 aaKnown RBP9.38□□□□□ -0.91
PRKCH-217ENST00000555604 GPRASP1Q5JY77 1395 aa9.38□□□□□ -0.91
PRKCH-217ENST00000555604 STK26Q9P289 416 aa9.38□□□□□ -0.91
PRKCH-217ENST00000555604 EIF3AQ14152 1382 aaKnown RBP9.37□□□□□ -0.91
PRKCH-217ENST00000555604 ROBO2Q9HCK4 1378 aa9.37□□□□□ -0.91
PRKCH-217ENST00000555604 ATF3P18847 181 aa9.37□□□□□ -0.91
PRKCH-217ENST00000555604 C14orf37Q86TY3 774 aa9.37□□□□□ -0.91
PRKCH-217ENST00000555604 POGKQ9P215 609 aa9.37□□□□□ -0.91
PRKCH-217ENST00000555604 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 ASXL1Q8IXJ9 1541 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 NBPF1Q3BBV0 1214 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 NBPF8Q3BBV2 869 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 FBXO41Q8TF61 875 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 STRCP1A6NGW2 1772 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 ADGRL3Q9HAR2 1447 aa9.36□□□□□ -0.91
PRKCH-217ENST00000555604 PRAM1Q96QH2 718 aa9.35□□□□□ -0.91
PRKCH-217ENST00000555604 CARD11Q9BXL7 1154 aa9.35□□□□□ -0.91
PRKCH-217ENST00000555604 UBAP1LF5GYI3 381 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms