RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 GLMNQ92990 594 aa11.48□□□□□ -0.57
PAX3-210ENST00000555548 SLC39A7Q92504 469 aa11.47□□□□□ -0.57
PAX3-210ENST00000555548 GZF1Q9H116 711 aaPredicted RBP11.47□□□□□ -0.57
PAX3-210ENST00000555548 POM121CA8CG34 1229 aa11.46□□□□□ -0.57
PAX3-210ENST00000555548 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
PAX3-210ENST00000555548 RCCD1A6NED2 376 aa11.45□□□□□ -0.58
PAX3-210ENST00000555548 LILRB3O75022 631 aa11.45□□□□□ -0.58
PAX3-210ENST00000555548 NUTM1Q86Y26 1132 aa11.45□□□□□ -0.58
PAX3-210ENST00000555548 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
PAX3-210ENST00000555548 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
PAX3-210ENST00000555548 ZNF454Q8N9F8 522 aa11.44□□□□□ -0.58
PAX3-210ENST00000555548 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
PAX3-210ENST00000555548 C7P10643 843 aa11.43□□□□□ -0.58
PAX3-210ENST00000555548 QPCTQ16769 361 aa11.43□□□□□ -0.58
PAX3-210ENST00000555548 EYA1Q99502 592 aa11.43□□□□□ -0.58
PAX3-210ENST00000555548 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
PAX3-210ENST00000555548 AP1G2O75843 785 aa11.42□□□□□ -0.58
PAX3-210ENST00000555548 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
PAX3-210ENST00000555548 PATL2C9JE40 543 aaKnown RBP11.41□□□□□ -0.58
PAX3-210ENST00000555548 MFAP1P55081 439 aaKnown RBP11.41□□□□□ -0.58
PAX3-210ENST00000555548 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
PAX3-210ENST00000555548 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
PAX3-210ENST00000555548 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
PAX3-210ENST00000555548 PBXIP1Q96AQ6 731 aa11.4□□□□□ -0.58
PAX3-210ENST00000555548 FAM198AQ9UFP1 575 aa11.4□□□□□ -0.58
PAX3-210ENST00000555548 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
PAX3-210ENST00000555548 PCDHB15Q9Y5E8 787 aa11.39□□□□□ -0.59
PAX3-210ENST00000555548 NDUFV2P19404 249 aa11.38□□□□□ -0.59
PAX3-210ENST00000555548 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
PAX3-210ENST00000555548 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
PAX3-210ENST00000555548 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
PAX3-210ENST00000555548 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
PAX3-210ENST00000555548 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
PAX3-210ENST00000555548 DNAJB2P25686 324 aa11.36□□□□□ -0.59
PAX3-210ENST00000555548 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
PAX3-210ENST00000555548 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
PAX3-210ENST00000555548 USTQ9Y2C2 406 aa11.36□□□□□ -0.59
PAX3-210ENST00000555548 NUTM2BA6NNL0 878 aaPredicted RBP11.35□□□□□ -0.59
PAX3-210ENST00000555548 NUTM2EB1AL46 878 aaPredicted RBP11.35□□□□□ -0.59
PAX3-210ENST00000555548 GABBR2O75899 941 aa11.35□□□□□ -0.59
PAX3-210ENST00000555548 KCNA1Q09470 495 aa11.35□□□□□ -0.59
PAX3-210ENST00000555548 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
PAX3-210ENST00000555548 NUTM2AQ8IVF1 878 aaPredicted RBP11.35□□□□□ -0.59
PAX3-210ENST00000555548 ADAMTS19Q8TE59 1207 aa11.35□□□□□ -0.59
PAX3-210ENST00000555548 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
PAX3-210ENST00000555548 BRD1O95696 1058 aa11.34□□□□□ -0.59
PAX3-210ENST00000555548 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
PAX3-210ENST00000555548 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
PAX3-210ENST00000555548 SRPK2P78362 688 aaKnown RBP11.33□□□□□ -0.6
PAX3-210ENST00000555548 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
PAX3-210ENST00000555548 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
PAX3-210ENST00000555548 COL9A1P20849 921 aa11.32□□□□□ -0.6
PAX3-210ENST00000555548 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
PAX3-210ENST00000555548 NUDT7P0C024 238 aa11.31□□□□□ -0.6
PAX3-210ENST00000555548 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
PAX3-210ENST00000555548 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
PAX3-210ENST00000555548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.3□□□□□ -0.6
PAX3-210ENST00000555548 GPR37L1O60883 481 aa11.3□□□□□ -0.6
PAX3-210ENST00000555548 KDM4AO75164 1064 aa11.3□□□□□ -0.6
PAX3-210ENST00000555548 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
PAX3-210ENST00000555548 USP46P62068 366 aa11.3□□□□□ -0.6
PAX3-210ENST00000555548 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
PAX3-210ENST00000555548 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
PAX3-210ENST00000555548 RFX1P22670 979 aa11.28□□□□□ -0.6
PAX3-210ENST00000555548 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
PAX3-210ENST00000555548 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
PAX3-210ENST00000555548 TATDN2Q93075 761 aa11.28□□□□□ -0.6
PAX3-210ENST00000555548 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
PAX3-210ENST00000555548 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
PAX3-210ENST00000555548 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
PAX3-210ENST00000555548 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
PAX3-210ENST00000555548 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
PAX3-210ENST00000555548 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
PAX3-210ENST00000555548 HOXA2O43364 376 aa11.26□□□□□ -0.61
PAX3-210ENST00000555548 RDH13Q8NBN7 331 aa11.26□□□□□ -0.61
PAX3-210ENST00000555548 HMX1Q9NP08 348 aaPredicted RBP11.26□□□□□ -0.61
PAX3-210ENST00000555548 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
PAX3-210ENST00000555548 FDX1P10109 184 aa11.25□□□□□ -0.61
PAX3-210ENST00000555548 ALG2Q9H553 416 aa11.25□□□□□ -0.61
PAX3-210ENST00000555548 GCGRP47871 477 aa11.24□□□□□ -0.61
PAX3-210ENST00000555548 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
PAX3-210ENST00000555548 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
PAX3-210ENST00000555548 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
PAX3-210ENST00000555548 ZSWIM6Q9HCJ5 1215 aa11.24□□□□□ -0.61
PAX3-210ENST00000555548 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
PAX3-210ENST00000555548 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
PAX3-210ENST00000555548 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
PAX3-210ENST00000555548 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
PAX3-210ENST00000555548 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
PAX3-210ENST00000555548 VAC14Q08AM6 782 aa11.22□□□□□ -0.61
PAX3-210ENST00000555548 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
PAX3-210ENST00000555548 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
PAX3-210ENST00000555548 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
PAX3-210ENST00000555548 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
PAX3-210ENST00000555548 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
PAX3-210ENST00000555548 NISCHQ9Y2I1 1504 aa11.2□□□□□ -0.62
PAX3-210ENST00000555548 PTPREP23469 700 aa11.2□□□□□ -0.62
PAX3-210ENST00000555548 HELBQ8NG08 1087 aaPredicted RBP11.2□□□□□ -0.62
PAX3-210ENST00000555548 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
PAX3-210ENST00000555548 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms