RNA–Protein interactions for RNA: ENST00000555498.5

KTN1-221, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 3

Gene KTN1, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-221ENST00000555498 SENP3Q9H4L4 574 aaPredicted RBP30.69■■■□□ 2.5
KTN1-221ENST00000555498 MYO5BQ9ULV0 1848 aa30.68■■■□□ 2.5
KTN1-221ENST00000555498 ZFYVE9O95405 1425 aa30.66■■■□□ 2.5
KTN1-221ENST00000555498 PPP1R15AO75807 674 aaPredicted RBP30.66■■■□□ 2.5
KTN1-221ENST00000555498 PHF23Q9BUL5 403 aaPredicted RBP30.66■■■□□ 2.5
KTN1-221ENST00000555498 PLEKHG1Q9ULL1 1385 aa30.66■■■□□ 2.5
KTN1-221ENST00000555498 TMEM131LA2VDJ0 1609 aa30.65■■■□□ 2.5
KTN1-221ENST00000555498 RIMS2Q9UQ26 1411 aa30.65■■■□□ 2.5
KTN1-221ENST00000555498 NKTRP30414 1462 aaKnown RBP30.65■■■□□ 2.5
KTN1-221ENST00000555498 FAM135BQ49AJ0 1406 aa30.64■■■□□ 2.5
KTN1-221ENST00000555498 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.64■■■□□ 2.5
KTN1-221ENST00000555498 IQGAP3Q86VI3 1631 aa30.64■■■□□ 2.5
KTN1-221ENST00000555498 E9PCH4 1651 aa30.64■■■□□ 2.5
KTN1-221ENST00000555498 NWD1Q149M9 1564 aa30.63■■■□□ 2.49
KTN1-221ENST00000555498 CHGAP10645 457 aaKnown RBP30.61■■■□□ 2.49
KTN1-221ENST00000555498 ITGAEP38570 1179 aa30.61■■■□□ 2.49
KTN1-221ENST00000555498 NUP155O75694 1391 aa30.61■■■□□ 2.49
KTN1-221ENST00000555498 TBX22Q9Y458 520 aa30.58■■■□□ 2.49
KTN1-221ENST00000555498 CHD2O14647 1828 aaKnown RBP30.57■■■□□ 2.48
KTN1-221ENST00000555498 MSH6P52701 1360 aa30.56■■■□□ 2.48
KTN1-221ENST00000555498 RBM33Q96EV2 1170 aaKnown RBP30.56■■■□□ 2.48
KTN1-221ENST00000555498 PPARGC1BQ86YN6 1023 aaKnown RBP30.54■■■□□ 2.48
KTN1-221ENST00000555498 ROBO1Q9Y6N7 1651 aa30.5■■■□□ 2.47
KTN1-221ENST00000555498 NCOA3Q9Y6Q9 1424 aa30.48■■■□□ 2.47
KTN1-221ENST00000555498 SLAIN2Q9P270 581 aa30.48■■■□□ 2.47
KTN1-221ENST00000555498 DIP2AQ14689 1571 aa30.47■■■□□ 2.47
KTN1-221ENST00000555498 PIK3R4Q99570 1358 aa30.47■■■□□ 2.47
KTN1-221ENST00000555498 NUTM2DQ5VT03 806 aaPredicted RBP30.46■■■□□ 2.47
KTN1-221ENST00000555498 ADAMTS13Q76LX8 1427 aa30.46■■■□□ 2.47
KTN1-221ENST00000555498 SPHKAPQ2M3C7 1700 aa30.4■■■□□ 2.46
KTN1-221ENST00000555498 C14orf37Q86TY3 774 aa30.4■■■□□ 2.46
KTN1-221ENST00000555498 TRPM2O94759 1503 aa30.38■■■□□ 2.45
KTN1-221ENST00000555498 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
KTN1-221ENST00000555498 C19orf44Q9H6X5 657 aa30.36■■■□□ 2.45
KTN1-221ENST00000555498 RGS17Q9UGC6 210 aaPredicted RBP30.36■■■□□ 2.45
KTN1-221ENST00000555498 CADPS2Q86UW7 1296 aa30.35■■■□□ 2.45
KTN1-221ENST00000555498 PHLPP1O60346 1717 aa30.34■■■□□ 2.45
KTN1-221ENST00000555498 AMOTL2Q9Y2J4 779 aa30.34■■■□□ 2.45
KTN1-221ENST00000555498 ZNF326Q5BKZ1 582 aaKnown RBP30.33■■■□□ 2.45
KTN1-221ENST00000555498 ATF3P18847 181 aa30.32■■■□□ 2.44
KTN1-221ENST00000555498 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.3■■■□□ 2.44
KTN1-221ENST00000555498 NAIPQ13075 1403 aa30.3■■■□□ 2.44
KTN1-221ENST00000555498 JCADQ9P266 1359 aa30.29■■■□□ 2.44
KTN1-221ENST00000555498 SETBP1Q9Y6X0 1596 aa30.28■■■□□ 2.44
KTN1-221ENST00000555498 PTPRUQ92729 1446 aa30.27■■■□□ 2.44
KTN1-221ENST00000555498 NRXN3Q9Y4C0 1643 aa30.25■■■□□ 2.43
KTN1-221ENST00000555498 CLTCL1P53675 1640 aa30.22■■■□□ 2.43
KTN1-221ENST00000555498 COL16A1Q07092 1604 aaPredicted RBP30.22■■■□□ 2.43
KTN1-221ENST00000555498 KIF1BO60333 1816 aa30.22■■■□□ 2.43
KTN1-221ENST00000555498 XRN1Q8IZH2 1706 aaKnown RBP30.21■■■□□ 2.43
KTN1-221ENST00000555498 DCCP43146 1447 aa30.21■■■□□ 2.43
KTN1-221ENST00000555498 TRIM52Q96A61 297 aa30.2■■■□□ 2.43
KTN1-221ENST00000555498 POTEAQ6S8J7 498 aa30.19■■■□□ 2.42
KTN1-221ENST00000555498 HFM1A2PYH4 1435 aa30.19■■■□□ 2.42
KTN1-221ENST00000555498 NEXMIFQ5QGS0 1516 aa30.18■■■□□ 2.42
KTN1-221ENST00000555498 AHDC1Q5TGY3 1603 aaPredicted RBP30.18■■■□□ 2.42
KTN1-221ENST00000555498 METP08581 1390 aa30.17■■■□□ 2.42
KTN1-221ENST00000555498 SPATA31A6Q5VVP1 1343 aa30.17■■■□□ 2.42
KTN1-221ENST00000555498 VGFO15240 615 aaPredicted RBP30.13■■■□□ 2.41
KTN1-221ENST00000555498 BRINP3Q76B58 766 aa30.13■■■□□ 2.41
KTN1-221ENST00000555498 SLC4A1APQ9BWU0 796 aaKnown RBP30.12■■■□□ 2.41
KTN1-221ENST00000555498 RPGRIP1LQ68CZ1 1315 aa30.1■■■□□ 2.41
KTN1-221ENST00000555498 SHPRHQ149N8 1683 aa30.08■■■□□ 2.41
KTN1-221ENST00000555498 MEX3CQ5U5Q3 659 aaKnown RBP30.07■■■□□ 2.4
KTN1-221ENST00000555498 MST1RQ04912 1400 aa30.06■■■□□ 2.4
KTN1-221ENST00000555498 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
KTN1-221ENST00000555498 ASXL1Q8IXJ9 1541 aa30.05■■■□□ 2.4
KTN1-221ENST00000555498 LRP6O75581 1613 aa30.03■■■□□ 2.4
KTN1-221ENST00000555498 ZNF772Q68DY9 489 aaPredicted RBP30.01■■■□□ 2.39
KTN1-221ENST00000555498 SETD5Q9C0A6 1442 aa29.99■■■□□ 2.39
KTN1-221ENST00000555498 LRRC59Q96AG4 307 aaKnown RBP29.99■■■□□ 2.39
KTN1-221ENST00000555498 NHSL1Q5SYE7 1610 aa29.99■■■□□ 2.39
KTN1-221ENST00000555498 NALCNQ8IZF0 1738 aa29.99■■■□□ 2.39
KTN1-221ENST00000555498 PTCH1Q13635 1447 aa29.98■■■□□ 2.39
KTN1-221ENST00000555498 SETD1AO15047 1707 aaKnown RBP29.97■■■□□ 2.39
KTN1-221ENST00000555498 PPLO60437 1756 aa29.97■■■□□ 2.39
KTN1-221ENST00000555498 NUTM2BA6NNL0 878 aaPredicted RBP29.94■■■□□ 2.38
KTN1-221ENST00000555498 NUTM2EB1AL46 878 aaPredicted RBP29.94■■■□□ 2.38
KTN1-221ENST00000555498 NUTM2AQ8IVF1 878 aaPredicted RBP29.94■■■□□ 2.38
KTN1-221ENST00000555498 PRAG1Q86YV5 1406 aa29.94■■■□□ 2.38
KTN1-221ENST00000555498 ROBO2Q9HCK4 1378 aa29.91■■■□□ 2.38
KTN1-221ENST00000555498 FOXD1Q16676 465 aa29.91■■■□□ 2.38
KTN1-221ENST00000555498 C1orf167Q5SNV9 1468 aa29.91■■■□□ 2.38
KTN1-221ENST00000555498 CCDC144AA2RUR9 1427 aa29.9■■■□□ 2.38
KTN1-221ENST00000555498 ACIN1Q9UKV3 1341 aaKnown RBP29.88■■■□□ 2.37
KTN1-221ENST00000555498 MPHOSPH9Q99550 1183 aa29.87■■■□□ 2.37
KTN1-221ENST00000555498 DDX17Q92841 729 aaKnown RBP29.86■■■□□ 2.37
KTN1-221ENST00000555498 RXRBP28702 533 aa29.84■■■□□ 2.37
KTN1-221ENST00000555498 PNPLA6Q8IY17 1366 aa29.84■■■□□ 2.37
KTN1-221ENST00000555498 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
KTN1-221ENST00000555498 RGL3Q3MIN7 710 aa29.83■■■□□ 2.37
KTN1-221ENST00000555498 LAMC1P11047 1609 aa29.82■■■□□ 2.36
KTN1-221ENST00000555498 AFF2P51816 1311 aa29.82■■■□□ 2.36
KTN1-221ENST00000555498 SPATA31E1Q6ZUB1 1445 aa29.81■■■□□ 2.36
KTN1-221ENST00000555498 ADGRF5Q8IZF2 1346 aa29.81■■■□□ 2.36
KTN1-221ENST00000555498 ORAI2Q96SN7 254 aa29.81■■■□□ 2.36
KTN1-221ENST00000555498 SOS2Q07890 1332 aaPredicted RBP29.78■■■□□ 2.36
KTN1-221ENST00000555498 C8orf37Q96NL8 207 aa29.77■■■□□ 2.36
KTN1-221ENST00000555498 IFT172Q9UG01 1749 aa29.76■■■□□ 2.36
KTN1-221ENST00000555498 CDK12Q9NYV4 1490 aaPredicted RBP29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms