RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BCANQ96GW7 911 aa14.37□□□□□ -0.11
PSEN1-213ENST00000555386 PPP1R15AO75807 674 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-213ENST00000555386 EID1Q9Y6B2 187 aa14.36□□□□□ -0.11
PSEN1-213ENST00000555386 LTKP29376 864 aa14.35□□□□□ -0.11
PSEN1-213ENST00000555386 TMEM2Q9UHN6 1383 aa14.35□□□□□ -0.11
PSEN1-213ENST00000555386 KDM5AP29375 1690 aaKnown RBP14.34□□□□□ -0.11
PSEN1-213ENST00000555386 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
PSEN1-213ENST00000555386 ANKRD30BQ9BXX2 1392 aa14.33□□□□□ -0.12
PSEN1-213ENST00000555386 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.12
PSEN1-213ENST00000555386 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
PSEN1-213ENST00000555386 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
PSEN1-213ENST00000555386 SLIT1O75093 1534 aa14.31□□□□□ -0.12
PSEN1-213ENST00000555386 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
PSEN1-213ENST00000555386 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
PSEN1-213ENST00000555386 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
PSEN1-213ENST00000555386 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
PSEN1-213ENST00000555386 NPHP4O75161 1426 aaPredicted RBP14.29□□□□□ -0.12
PSEN1-213ENST00000555386 IQGAP1P46940 1657 aa14.29□□□□□ -0.12
PSEN1-213ENST00000555386 HDGFP51858 240 aaKnown RBP14.29□□□□□ -0.12
PSEN1-213ENST00000555386 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
PSEN1-213ENST00000555386 SLC26A8Q96RN1 970 aa14.28□□□□□ -0.12
PSEN1-213ENST00000555386 ZFYVE9O95405 1425 aa14.28□□□□□ -0.12
PSEN1-213ENST00000555386 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
PSEN1-213ENST00000555386 NEXMIFQ5QGS0 1516 aa14.26□□□□□ -0.13
PSEN1-213ENST00000555386 PPLO60437 1756 aa14.26□□□□□ -0.13
PSEN1-213ENST00000555386 NPM3O75607 178 aaKnown RBP14.25□□□□□ -0.13
PSEN1-213ENST00000555386 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
PSEN1-213ENST00000555386 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
PSEN1-213ENST00000555386 MED14O60244 1454 aa14.23□□□□□ -0.13
PSEN1-213ENST00000555386 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
PSEN1-213ENST00000555386 PLEKHG1Q9ULL1 1385 aa14.23□□□□□ -0.13
PSEN1-213ENST00000555386 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
PSEN1-213ENST00000555386 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-213ENST00000555386 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
PSEN1-213ENST00000555386 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
PSEN1-213ENST00000555386 NRXN3Q9Y4C0 1643 aa14.17□□□□□ -0.14
PSEN1-213ENST00000555386 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
PSEN1-213ENST00000555386 ADAMTS13Q76LX8 1427 aa14.16□□□□□ -0.14
PSEN1-213ENST00000555386 L3MBTL2Q969R5 705 aa14.16□□□□□ -0.14
PSEN1-213ENST00000555386 RBM33Q96EV2 1170 aaKnown RBP14.16□□□□□ -0.14
PSEN1-213ENST00000555386 TBX22Q9Y458 520 aa14.15□□□□□ -0.14
PSEN1-213ENST00000555386 SETBP1Q9Y6X0 1596 aa14.15□□□□□ -0.14
PSEN1-213ENST00000555386 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.14
PSEN1-213ENST00000555386 TONSLQ96HA7 1378 aa14.14□□□□□ -0.15
PSEN1-213ENST00000555386 CHD2O14647 1828 aaKnown RBP14.14□□□□□ -0.15
PSEN1-213ENST00000555386 ALKQ9UM73 1620 aa14.13□□□□□ -0.15
PSEN1-213ENST00000555386 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
PSEN1-213ENST00000555386 TMEM132EQ6IEE7 984 aa14.13□□□□□ -0.15
PSEN1-213ENST00000555386 STK26Q9P289 416 aa14.13□□□□□ -0.15
PSEN1-213ENST00000555386 METP08581 1390 aa14.13□□□□□ -0.15
PSEN1-213ENST00000555386 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
PSEN1-213ENST00000555386 MYOM2P54296 1465 aa14.12□□□□□ -0.15
PSEN1-213ENST00000555386 LTBP4Q8N2S1 1624 aa14.12□□□□□ -0.15
PSEN1-213ENST00000555386 KCNA6P17658 529 aa14.12□□□□□ -0.15
PSEN1-213ENST00000555386 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-213ENST00000555386 AMOTL2Q9Y2J4 779 aa14.12□□□□□ -0.15
PSEN1-213ENST00000555386 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
PSEN1-213ENST00000555386 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
PSEN1-213ENST00000555386 CERKQ8TCT0 537 aa14.11□□□□□ -0.15
PSEN1-213ENST00000555386 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
PSEN1-213ENST00000555386 PTPRUQ92729 1446 aa14.1□□□□□ -0.15
PSEN1-213ENST00000555386 C14orf37Q86TY3 774 aa14.09□□□□□ -0.15
PSEN1-213ENST00000555386 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
PSEN1-213ENST00000555386 C14orf93Q9H972 538 aaKnown RBP14.08□□□□□ -0.16
PSEN1-213ENST00000555386 NRXN1Q9ULB1 1477 aa14.08□□□□□ -0.16
PSEN1-213ENST00000555386 CPS1P31327 1500 aa14.07□□□□□ -0.16
PSEN1-213ENST00000555386 LRRC7Q96NW7 1537 aa14.06□□□□□ -0.16
PSEN1-213ENST00000555386 PRAG1Q86YV5 1406 aa14.06□□□□□ -0.16
PSEN1-213ENST00000555386 PIK3R4Q99570 1358 aa14.06□□□□□ -0.16
PSEN1-213ENST00000555386 XIRP1Q702N8 1843 aaKnown RBP14.06□□□□□ -0.16
PSEN1-213ENST00000555386 NWD1Q149M9 1564 aa14.06□□□□□ -0.16
PSEN1-213ENST00000555386 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
PSEN1-213ENST00000555386 LAMC1P11047 1609 aa14.05□□□□□ -0.16
PSEN1-213ENST00000555386 TMEM94Q12767 1356 aa14.05□□□□□ -0.16
PSEN1-213ENST00000555386 ASXL1Q8IXJ9 1541 aa14.05□□□□□ -0.16
PSEN1-213ENST00000555386 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
PSEN1-213ENST00000555386 XRN1Q8IZH2 1706 aaKnown RBP14.04□□□□□ -0.16
PSEN1-213ENST00000555386 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
PSEN1-213ENST00000555386 NBPF8Q3BBV2 869 aa14.04□□□□□ -0.16
PSEN1-213ENST00000555386 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
PSEN1-213ENST00000555386 NKTRP30414 1462 aaKnown RBP14.03□□□□□ -0.16
PSEN1-213ENST00000555386 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
PSEN1-213ENST00000555386 WAPLQ7Z5K2 1190 aa14.03□□□□□ -0.16
PSEN1-213ENST00000555386 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.16
PSEN1-213ENST00000555386 ROBO2Q9HCK4 1378 aa14.02□□□□□ -0.17
PSEN1-213ENST00000555386 LRPPRCP42704 1394 aaKnown RBP14.01□□□□□ -0.17
PSEN1-213ENST00000555386 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
PSEN1-213ENST00000555386 PIP4K2BP78356 416 aa14□□□□□ -0.17
PSEN1-213ENST00000555386 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
PSEN1-213ENST00000555386 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
PSEN1-213ENST00000555386 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
PSEN1-213ENST00000555386 POGKQ9P215 609 aa13.99□□□□□ -0.17
PSEN1-213ENST00000555386 ADGRB1O14514 1584 aa13.99□□□□□ -0.17
PSEN1-213ENST00000555386 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
PSEN1-213ENST00000555386 DIEXFQ68CQ4 756 aaKnown RBP13.99□□□□□ -0.17
PSEN1-213ENST00000555386 PRAM1Q96QH2 718 aa13.99□□□□□ -0.17
PSEN1-213ENST00000555386 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
PSEN1-213ENST00000555386 MSH6P52701 1360 aa13.98□□□□□ -0.17
PSEN1-213ENST00000555386 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
PSEN1-213ENST00000555386 NALCNQ8IZF0 1738 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms