RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 FAM50AQ14320 339 aaKnown RBP20.44■□□□□ 0.86
XRCC3-212ENST00000555231 GCC2Q8IWJ2 1684 aa20.43■□□□□ 0.86
XRCC3-212ENST00000555231 SLC52A1Q9NWF4 448 aa20.43■□□□□ 0.86
XRCC3-212ENST00000555231 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
XRCC3-212ENST00000555231 POTEAQ6S8J7 498 aa20.42■□□□□ 0.86
XRCC3-212ENST00000555231 CHD2O14647 1828 aaKnown RBP20.41■□□□□ 0.86
XRCC3-212ENST00000555231 MSH6P52701 1360 aa20.4■□□□□ 0.86
XRCC3-212ENST00000555231 ANKRD50Q9ULJ7 1429 aa20.4■□□□□ 0.86
XRCC3-212ENST00000555231 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
XRCC3-212ENST00000555231 PHLPP1O60346 1717 aa20.39■□□□□ 0.85
XRCC3-212ENST00000555231 RPRD2Q5VT52 1461 aaKnown RBP20.38■□□□□ 0.85
XRCC3-212ENST00000555231 RIMS2Q9UQ26 1411 aa20.38■□□□□ 0.85
XRCC3-212ENST00000555231 PLEKHG1Q9ULL1 1385 aa20.37■□□□□ 0.85
XRCC3-212ENST00000555231 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
XRCC3-212ENST00000555231 TMEM131LA2VDJ0 1609 aa20.37■□□□□ 0.85
XRCC3-212ENST00000555231 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
XRCC3-212ENST00000555231 SLAIN2Q9P270 581 aa20.36■□□□□ 0.85
XRCC3-212ENST00000555231 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
XRCC3-212ENST00000555231 UNC13BO14795 1591 aa20.33■□□□□ 0.84
XRCC3-212ENST00000555231 E9PCH4 1651 aa20.32■□□□□ 0.84
XRCC3-212ENST00000555231 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
XRCC3-212ENST00000555231 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
XRCC3-212ENST00000555231 TBX22Q9Y458 520 aa20.3■□□□□ 0.84
XRCC3-212ENST00000555231 JCADQ9P266 1359 aa20.3■□□□□ 0.84
XRCC3-212ENST00000555231 COL16A1Q07092 1604 aaPredicted RBP20.29■□□□□ 0.84
XRCC3-212ENST00000555231 C14orf37Q86TY3 774 aa20.29■□□□□ 0.84
XRCC3-212ENST00000555231 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.84
XRCC3-212ENST00000555231 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
XRCC3-212ENST00000555231 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.83
XRCC3-212ENST00000555231 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
XRCC3-212ENST00000555231 LRP6O75581 1613 aa20.24■□□□□ 0.83
XRCC3-212ENST00000555231 DIP2AQ14689 1571 aa20.23■□□□□ 0.83
XRCC3-212ENST00000555231 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
XRCC3-212ENST00000555231 ATF3P18847 181 aa20.2■□□□□ 0.82
XRCC3-212ENST00000555231 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
XRCC3-212ENST00000555231 C19orf44Q9H6X5 657 aa20.2■□□□□ 0.82
XRCC3-212ENST00000555231 NUP155O75694 1391 aa20.2■□□□□ 0.82
XRCC3-212ENST00000555231 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
XRCC3-212ENST00000555231 PIK3R4Q99570 1358 aa20.2■□□□□ 0.82
XRCC3-212ENST00000555231 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
XRCC3-212ENST00000555231 TRPM2O94759 1503 aa20.19■□□□□ 0.82
XRCC3-212ENST00000555231 ITGAEP38570 1179 aa20.19■□□□□ 0.82
XRCC3-212ENST00000555231 MEX3CQ5U5Q3 659 aaKnown RBP20.19■□□□□ 0.82
XRCC3-212ENST00000555231 AMOTL2Q9Y2J4 779 aa20.19■□□□□ 0.82
XRCC3-212ENST00000555231 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
XRCC3-212ENST00000555231 SHPRHQ149N8 1683 aa20.18■□□□□ 0.82
XRCC3-212ENST00000555231 SPATA31A6Q5VVP1 1343 aa20.18■□□□□ 0.82
XRCC3-212ENST00000555231 NRXN3Q9Y4C0 1643 aa20.15■□□□□ 0.82
XRCC3-212ENST00000555231 BRINP3Q76B58 766 aa20.14■□□□□ 0.81
XRCC3-212ENST00000555231 TRIM52Q96A61 297 aa20.14■□□□□ 0.81
XRCC3-212ENST00000555231 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
XRCC3-212ENST00000555231 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-212ENST00000555231 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-212ENST00000555231 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-212ENST00000555231 XRN1Q8IZH2 1706 aaKnown RBP20.13■□□□□ 0.81
XRCC3-212ENST00000555231 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
XRCC3-212ENST00000555231 PPARGC1BQ86YN6 1023 aaKnown RBP20.12■□□□□ 0.81
XRCC3-212ENST00000555231 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
XRCC3-212ENST00000555231 SETBP1Q9Y6X0 1596 aa20.09■□□□□ 0.81
XRCC3-212ENST00000555231 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
XRCC3-212ENST00000555231 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
XRCC3-212ENST00000555231 UPF1Q92900 1129 aaKnown RBP eCLIP20.07■□□□□ 0.8
XRCC3-212ENST00000555231 DCCP43146 1447 aa20.07■□□□□ 0.8
XRCC3-212ENST00000555231 MST1RQ04912 1400 aa20.07■□□□□ 0.8
XRCC3-212ENST00000555231 METP08581 1390 aa20.07■□□□□ 0.8
XRCC3-212ENST00000555231 RXRBP28702 533 aa20.05■□□□□ 0.8
XRCC3-212ENST00000555231 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
XRCC3-212ENST00000555231 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
XRCC3-212ENST00000555231 NALCNQ8IZF0 1738 aa20.04■□□□□ 0.8
XRCC3-212ENST00000555231 AFF2P51816 1311 aa20.03■□□□□ 0.8
XRCC3-212ENST00000555231 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
XRCC3-212ENST00000555231 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
XRCC3-212ENST00000555231 KIF1BO60333 1816 aa20.01■□□□□ 0.79
XRCC3-212ENST00000555231 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
XRCC3-212ENST00000555231 LRRC59Q96AG4 307 aaKnown RBP20■□□□□ 0.79
XRCC3-212ENST00000555231 C8orf37Q96NL8 207 aa19.98■□□□□ 0.79
XRCC3-212ENST00000555231 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
XRCC3-212ENST00000555231 CDK12Q9NYV4 1490 aaPredicted RBP19.97■□□□□ 0.79
XRCC3-212ENST00000555231 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
XRCC3-212ENST00000555231 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
XRCC3-212ENST00000555231 RGS12O14924 1447 aa19.93■□□□□ 0.78
XRCC3-212ENST00000555231 ADAMTS2O95450 1211 aa19.92■□□□□ 0.78
XRCC3-212ENST00000555231 RBM6P78332 1123 aaKnown RBP19.91■□□□□ 0.78
XRCC3-212ENST00000555231 ORAI2Q96SN7 254 aa19.91■□□□□ 0.78
XRCC3-212ENST00000555231 ROBO2Q9HCK4 1378 aa19.91■□□□□ 0.78
XRCC3-212ENST00000555231 NAIPQ13075 1403 aa19.91■□□□□ 0.78
XRCC3-212ENST00000555231 PTCH1Q13635 1447 aa19.89■□□□□ 0.77
XRCC3-212ENST00000555231 NGLY1Q96IV0 654 aa19.89■□□□□ 0.77
XRCC3-212ENST00000555231 LAMC1P11047 1609 aa19.88■□□□□ 0.77
XRCC3-212ENST00000555231 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
XRCC3-212ENST00000555231 RRBP1Q9P2E9 1410 aaKnown RBP19.86■□□□□ 0.77
XRCC3-212ENST00000555231 PPLO60437 1756 aa19.86■□□□□ 0.77
XRCC3-212ENST00000555231 SOS2Q07890 1332 aaPredicted RBP19.86■□□□□ 0.77
XRCC3-212ENST00000555231 USP21Q9UK80 565 aa19.83■□□□□ 0.77
XRCC3-212ENST00000555231 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
XRCC3-212ENST00000555231 RPGRIP1LQ68CZ1 1315 aa19.8■□□□□ 0.76
XRCC3-212ENST00000555231 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
XRCC3-212ENST00000555231 PRAG1Q86YV5 1406 aa19.8■□□□□ 0.76
XRCC3-212ENST00000555231 COL22A1Q8NFW1 1626 aaPredicted RBP19.8■□□□□ 0.76
XRCC3-212ENST00000555231 FOXD1Q16676 465 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms