RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
XRCC3-210ENST00000554974 KCNA6P17658 529 aa23.36■■□□□ 1.33
XRCC3-210ENST00000554974 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
XRCC3-210ENST00000554974 SLC52A1Q9NWF4 448 aa23.35■■□□□ 1.33
XRCC3-210ENST00000554974 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
XRCC3-210ENST00000554974 FAM135BQ49AJ0 1406 aa23.34■■□□□ 1.33
XRCC3-210ENST00000554974 PROSER2Q86WR7 435 aaPredicted RBP23.33■■□□□ 1.33
XRCC3-210ENST00000554974 E9PCH4 1651 aa23.32■■□□□ 1.32
XRCC3-210ENST00000554974 BCANQ96GW7 911 aa23.32■■□□□ 1.32
XRCC3-210ENST00000554974 RIMS2Q9UQ26 1411 aa23.3■■□□□ 1.32
XRCC3-210ENST00000554974 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
XRCC3-210ENST00000554974 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
XRCC3-210ENST00000554974 PLEKHG1Q9ULL1 1385 aa23.28■■□□□ 1.32
XRCC3-210ENST00000554974 IQGAP3Q86VI3 1631 aa23.27■■□□□ 1.32
XRCC3-210ENST00000554974 MSH6P52701 1360 aa23.27■■□□□ 1.31
XRCC3-210ENST00000554974 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
XRCC3-210ENST00000554974 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
XRCC3-210ENST00000554974 CHGAP10645 457 aaKnown RBP23.22■■□□□ 1.31
XRCC3-210ENST00000554974 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
XRCC3-210ENST00000554974 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
XRCC3-210ENST00000554974 ADAMTS13Q76LX8 1427 aa23.19■■□□□ 1.3
XRCC3-210ENST00000554974 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
XRCC3-210ENST00000554974 SLAIN2Q9P270 581 aa23.17■■□□□ 1.3
XRCC3-210ENST00000554974 COL16A1Q07092 1604 aaPredicted RBP23.16■■□□□ 1.3
XRCC3-210ENST00000554974 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
XRCC3-210ENST00000554974 ITGAEP38570 1179 aa23.15■■□□□ 1.3
XRCC3-210ENST00000554974 TBX22Q9Y458 520 aa23.15■■□□□ 1.3
XRCC3-210ENST00000554974 NUP155O75694 1391 aa23.14■■□□□ 1.3
XRCC3-210ENST00000554974 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.14■■□□□ 1.3
XRCC3-210ENST00000554974 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
XRCC3-210ENST00000554974 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.14■■□□□ 1.29
XRCC3-210ENST00000554974 SPHKAPQ2M3C7 1700 aa23.12■■□□□ 1.29
XRCC3-210ENST00000554974 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
XRCC3-210ENST00000554974 TRPM2O94759 1503 aa23.12■■□□□ 1.29
XRCC3-210ENST00000554974 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
XRCC3-210ENST00000554974 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
XRCC3-210ENST00000554974 NRXN3Q9Y4C0 1643 aa23.1■■□□□ 1.29
XRCC3-210ENST00000554974 JCADQ9P266 1359 aa23.1■■□□□ 1.29
XRCC3-210ENST00000554974 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
XRCC3-210ENST00000554974 PIK3R4Q99570 1358 aa23.08■■□□□ 1.29
XRCC3-210ENST00000554974 PTPRUQ92729 1446 aa23.08■■□□□ 1.28
XRCC3-210ENST00000554974 XRN1Q8IZH2 1706 aaKnown RBP23.07■■□□□ 1.28
XRCC3-210ENST00000554974 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
XRCC3-210ENST00000554974 LRP6O75581 1613 aa23.06■■□□□ 1.28
XRCC3-210ENST00000554974 SETBP1Q9Y6X0 1596 aa23.05■■□□□ 1.28
XRCC3-210ENST00000554974 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
XRCC3-210ENST00000554974 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
XRCC3-210ENST00000554974 CLTCL1P53675 1640 aa23.02■■□□□ 1.28
XRCC3-210ENST00000554974 ATF3P18847 181 aa23.02■■□□□ 1.28
XRCC3-210ENST00000554974 C19orf44Q9H6X5 657 aa23.02■■□□□ 1.28
XRCC3-210ENST00000554974 AMOTL2Q9Y2J4 779 aa23.02■■□□□ 1.28
XRCC3-210ENST00000554974 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
XRCC3-210ENST00000554974 SPATA31A6Q5VVP1 1343 aa22.97■■□□□ 1.27
XRCC3-210ENST00000554974 DCCP43146 1447 aa22.97■■□□□ 1.27
XRCC3-210ENST00000554974 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
XRCC3-210ENST00000554974 ASXL1Q8IXJ9 1541 aa22.97■■□□□ 1.27
XRCC3-210ENST00000554974 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
XRCC3-210ENST00000554974 METP08581 1390 aa22.96■■□□□ 1.27
XRCC3-210ENST00000554974 NALCNQ8IZF0 1738 aa22.94■■□□□ 1.26
XRCC3-210ENST00000554974 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
XRCC3-210ENST00000554974 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
XRCC3-210ENST00000554974 MST1RQ04912 1400 aa22.93■■□□□ 1.26
XRCC3-210ENST00000554974 KIF1BO60333 1816 aa22.93■■□□□ 1.26
XRCC3-210ENST00000554974 NAIPQ13075 1403 aa22.91■■□□□ 1.26
XRCC3-210ENST00000554974 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
XRCC3-210ENST00000554974 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
XRCC3-210ENST00000554974 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
XRCC3-210ENST00000554974 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
XRCC3-210ENST00000554974 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
XRCC3-210ENST00000554974 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
XRCC3-210ENST00000554974 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
XRCC3-210ENST00000554974 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
XRCC3-210ENST00000554974 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
XRCC3-210ENST00000554974 PPLO60437 1756 aa22.79■■□□□ 1.24
XRCC3-210ENST00000554974 HFM1A2PYH4 1435 aa22.79■■□□□ 1.24
XRCC3-210ENST00000554974 PTCH1Q13635 1447 aa22.79■■□□□ 1.24
XRCC3-210ENST00000554974 AFF2P51816 1311 aa22.78■■□□□ 1.24
XRCC3-210ENST00000554974 PNPLA6Q8IY17 1366 aa22.77■■□□□ 1.24
XRCC3-210ENST00000554974 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
XRCC3-210ENST00000554974 C1orf167Q5SNV9 1468 aa22.77■■□□□ 1.24
XRCC3-210ENST00000554974 LAMC1P11047 1609 aa22.75■■□□□ 1.23
XRCC3-210ENST00000554974 RXRBP28702 533 aa22.75■■□□□ 1.23
XRCC3-210ENST00000554974 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
XRCC3-210ENST00000554974 UPF1Q92900 1129 aaKnown RBP eCLIP22.73■■□□□ 1.23
XRCC3-210ENST00000554974 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
XRCC3-210ENST00000554974 CDK12Q9NYV4 1490 aaPredicted RBP22.73■■□□□ 1.23
XRCC3-210ENST00000554974 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
XRCC3-210ENST00000554974 C8orf37Q96NL8 207 aa22.72■■□□□ 1.23
XRCC3-210ENST00000554974 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
XRCC3-210ENST00000554974 RGS12O14924 1447 aa22.69■■□□□ 1.22
XRCC3-210ENST00000554974 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
XRCC3-210ENST00000554974 FOXD1Q16676 465 aa22.68■■□□□ 1.22
XRCC3-210ENST00000554974 RPGRIP1LQ68CZ1 1315 aa22.67■■□□□ 1.22
XRCC3-210ENST00000554974 ADAMTS2O95450 1211 aa22.67■■□□□ 1.22
XRCC3-210ENST00000554974 CDC42BPGQ6DT37 1551 aa22.66■■□□□ 1.22
XRCC3-210ENST00000554974 IFT172Q9UG01 1749 aa22.65■■□□□ 1.22
XRCC3-210ENST00000554974 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
XRCC3-210ENST00000554974 COL22A1Q8NFW1 1626 aaPredicted RBP22.63■■□□□ 1.21
XRCC3-210ENST00000554974 QTRT2Q9H974 415 aaKnown RBP22.62■■□□□ 1.21
XRCC3-210ENST00000554974 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms