RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 RIMS2Q9UQ26 1411 aa35.75■■■■□ 3.31
SDR39U1-209ENST00000554947 CCDC144AA2RUR9 1427 aa35.74■■■■□ 3.31
SDR39U1-209ENST00000554947 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.72■■■■□ 3.31
SDR39U1-209ENST00000554947 ANKRD30BQ9BXX2 1392 aa35.64■■■■□ 3.3
SDR39U1-209ENST00000554947 PLEKHG1Q9ULL1 1385 aa35.64■■■■□ 3.3
SDR39U1-209ENST00000554947 ZNF326Q5BKZ1 582 aaKnown RBP35.62■■■■□ 3.29
SDR39U1-209ENST00000554947 PPP1R15AO75807 674 aaPredicted RBP35.61■■■■□ 3.29
SDR39U1-209ENST00000554947 NEXMIFQ5QGS0 1516 aa35.61■■■■□ 3.29
SDR39U1-209ENST00000554947 RPGRIP1LQ68CZ1 1315 aa35.6■■■■□ 3.29
SDR39U1-209ENST00000554947 LTBP4Q8N2S1 1624 aa35.6■■■■□ 3.29
SDR39U1-209ENST00000554947 SPATA31E1Q6ZUB1 1445 aa35.58■■■■□ 3.29
SDR39U1-209ENST00000554947 PPLO60437 1756 aa35.56■■■■□ 3.28
SDR39U1-209ENST00000554947 ZNF335Q9H4Z2 1342 aaPredicted RBP35.56■■■■□ 3.28
SDR39U1-209ENST00000554947 DIP2AQ14689 1571 aa35.51■■■■□ 3.28
SDR39U1-209ENST00000554947 CPS1P31327 1500 aa35.5■■■■□ 3.27
SDR39U1-209ENST00000554947 NUTM2DQ5VT03 806 aaPredicted RBP35.49■■■■□ 3.27
SDR39U1-209ENST00000554947 SETBP1Q9Y6X0 1596 aa35.49■■■■□ 3.27
SDR39U1-209ENST00000554947 IFT172Q9UG01 1749 aa35.49■■■■□ 3.27
SDR39U1-209ENST00000554947 VGFO15240 615 aaPredicted RBP35.48■■■■□ 3.27
SDR39U1-209ENST00000554947 BCANQ96GW7 911 aa35.48■■■■□ 3.27
SDR39U1-209ENST00000554947 CERKQ8TCT0 537 aa35.47■■■■□ 3.27
SDR39U1-209ENST00000554947 TBX22Q9Y458 520 aa35.46■■■■□ 3.27
SDR39U1-209ENST00000554947 STRCP1A6NGW2 1772 aa35.46■■■■□ 3.27
SDR39U1-209ENST00000554947 SLC26A8Q96RN1 970 aa35.45■■■■□ 3.27
SDR39U1-209ENST00000554947 ADAMTS13Q76LX8 1427 aa35.45■■■■□ 3.27
SDR39U1-209ENST00000554947 IQSEC2Q5JU85 1478 aa35.45■■■■□ 3.27
SDR39U1-209ENST00000554947 NRXN3Q9Y4C0 1643 aa35.45■■■■□ 3.27
SDR39U1-209ENST00000554947 RGL3Q3MIN7 710 aa35.42■■■■□ 3.26
SDR39U1-209ENST00000554947 CHD2O14647 1828 aaKnown RBP35.41■■■■□ 3.26
SDR39U1-209ENST00000554947 DHX57Q6P158 1386 aaKnown RBP35.39■■■■□ 3.26
SDR39U1-209ENST00000554947 PIK3R4Q99570 1358 aa35.39■■■■□ 3.26
SDR39U1-209ENST00000554947 NWD1Q149M9 1564 aa35.38■■■■□ 3.25
SDR39U1-209ENST00000554947 KCNA6P17658 529 aa35.37■■■■□ 3.25
SDR39U1-209ENST00000554947 PCGF6Q9BYE7 350 aa35.33■■■■□ 3.25
SDR39U1-209ENST00000554947 NKTRP30414 1462 aaKnown RBP35.31■■■■□ 3.24
SDR39U1-209ENST00000554947 MYOM2P54296 1465 aa35.31■■■■□ 3.24
SDR39U1-209ENST00000554947 SENP3Q9H4L4 574 aaPredicted RBP35.31■■■■□ 3.24
SDR39U1-209ENST00000554947 SETD1AO15047 1707 aaKnown RBP35.3■■■■□ 3.24
SDR39U1-209ENST00000554947 LRRC7Q96NW7 1537 aa35.29■■■■□ 3.24
SDR39U1-209ENST00000554947 STAC3Q96MF2 364 aa35.29■■■■□ 3.24
SDR39U1-209ENST00000554947 ADGRF5Q8IZF2 1346 aa35.28■■■■□ 3.24
SDR39U1-209ENST00000554947 ALKQ9UM73 1620 aa35.28■■■■□ 3.24
SDR39U1-209ENST00000554947 NRXN1Q9ULB1 1477 aa35.27■■■■□ 3.24
SDR39U1-209ENST00000554947 PIK3C2GO75747 1445 aa35.24■■■■□ 3.23
SDR39U1-209ENST00000554947 XIRP1Q702N8 1843 aaKnown RBP35.22■■■■□ 3.23
SDR39U1-209ENST00000554947 METP08581 1390 aa35.21■■■■□ 3.23
SDR39U1-209ENST00000554947 XRN1Q8IZH2 1706 aaKnown RBP35.2■■■■□ 3.23
SDR39U1-209ENST00000554947 FBXO41Q8TF61 875 aa35.2■■■■□ 3.23
SDR39U1-209ENST00000554947 PTPRUQ92729 1446 aa35.2■■■■□ 3.23
SDR39U1-209ENST00000554947 LAMC1P11047 1609 aa35.17■■■■□ 3.22
SDR39U1-209ENST00000554947 DCAF11Q8TEB1 546 aa35.16■■■■□ 3.22
SDR39U1-209ENST00000554947 AMOTL2Q9Y2J4 779 aa35.16■■■■□ 3.22
SDR39U1-209ENST00000554947 PROSER2Q86WR7 435 aaPredicted RBP35.15■■■■□ 3.22
SDR39U1-209ENST00000554947 NCOA3Q9Y6Q9 1424 aa35.14■■■■□ 3.22
SDR39U1-209ENST00000554947 PRAG1Q86YV5 1406 aa35.13■■■■□ 3.21
SDR39U1-209ENST00000554947 TMEM94Q12767 1356 aa35.13■■■■□ 3.21
SDR39U1-209ENST00000554947 SIN3AQ96ST3 1273 aa35.11■■■■□ 3.21
SDR39U1-209ENST00000554947 C14orf93Q9H972 538 aaKnown RBP35.11■■■■□ 3.21
SDR39U1-209ENST00000554947 KDM2AQ9Y2K7 1162 aa35.07■■■■□ 3.2
SDR39U1-209ENST00000554947 PTCH1Q13635 1447 aa35.05■■■■□ 3.2
SDR39U1-209ENST00000554947 ASXL1Q8IXJ9 1541 aa35.04■■■■□ 3.2
SDR39U1-209ENST00000554947 TOM1O60784 492 aa35.03■■■■□ 3.2
SDR39U1-209ENST00000554947 NEUROD1Q13562 356 aa35.03■■■■□ 3.2
SDR39U1-209ENST00000554947 KNDC1Q76NI1 1749 aa35.02■■■■□ 3.2
SDR39U1-209ENST00000554947 UBAP1LF5GYI3 381 aa35.01■■■■□ 3.2
SDR39U1-209ENST00000554947 CFAP70Q5T0N1 1121 aa35.01■■■■□ 3.2
SDR39U1-209ENST00000554947 LRPPRCP42704 1394 aaKnown RBP35■■■■□ 3.19
SDR39U1-209ENST00000554947 TECPR2O15040 1411 aa35■■■■□ 3.19
SDR39U1-209ENST00000554947 KIAA1210Q9ULL0 1709 aa35■■■■□ 3.19
SDR39U1-209ENST00000554947 L3MBTL2Q969R5 705 aa34.99■■■■□ 3.19
SDR39U1-209ENST00000554947 CLSPNQ9HAW4 1339 aa34.99■■■■□ 3.19
SDR39U1-209ENST00000554947 ILDR1Q86SU0 546 aaPredicted RBP34.98■■■■□ 3.19
SDR39U1-209ENST00000554947 MSH6P52701 1360 aa34.98■■■■□ 3.19
SDR39U1-209ENST00000554947 ABCC11Q96J66 1382 aa34.98■■■■□ 3.19
SDR39U1-209ENST00000554947 YTHDC2Q9H6S0 1430 aaKnown RBP34.97■■■■□ 3.19
SDR39U1-209ENST00000554947 TMEM132EQ6IEE7 984 aa34.95■■■■□ 3.19
SDR39U1-209ENST00000554947 RBM33Q96EV2 1170 aaKnown RBP34.95■■■■□ 3.19
SDR39U1-209ENST00000554947 ADGRB1O14514 1584 aa34.95■■■■□ 3.18
SDR39U1-209ENST00000554947 ROBO2Q9HCK4 1378 aa34.94■■■■□ 3.18
SDR39U1-209ENST00000554947 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.92■■■■□ 3.18
SDR39U1-209ENST00000554947 C19orf44Q9H6X5 657 aa34.92■■■■□ 3.18
SDR39U1-209ENST00000554947 SIRT1Q96EB6 747 aa34.9■■■■□ 3.18
SDR39U1-209ENST00000554947 DCCP43146 1447 aa34.89■■■■□ 3.18
SDR39U1-209ENST00000554947 C14orf37Q86TY3 774 aa34.89■■■■□ 3.18
SDR39U1-209ENST00000554947 ADGRL3Q9HAR2 1447 aa34.88■■■■□ 3.17
SDR39U1-209ENST00000554947 TONSLQ96HA7 1378 aa34.87■■■■□ 3.17
SDR39U1-209ENST00000554947 STK26Q9P289 416 aa34.87■■■■□ 3.17
SDR39U1-209ENST00000554947 FAM135BQ49AJ0 1406 aa34.87■■■■□ 3.17
SDR39U1-209ENST00000554947 NALCNQ8IZF0 1738 aa34.86■■■■□ 3.17
SDR39U1-209ENST00000554947 DLC1Q96QB1 1528 aa34.86■■■■□ 3.17
SDR39U1-209ENST00000554947 CADPS2Q86UW7 1296 aa34.84■■■■□ 3.17
SDR39U1-209ENST00000554947 ATF3P18847 181 aa34.8■■■■□ 3.16
SDR39U1-209ENST00000554947 TRPM1Q7Z4N2 1603 aa34.78■■■■□ 3.16
SDR39U1-209ENST00000554947 PIP4K2BP78356 416 aa34.78■■■■□ 3.16
SDR39U1-209ENST00000554947 SLAIN2Q9P270 581 aa34.76■■■■□ 3.16
SDR39U1-209ENST00000554947 WAPLQ7Z5K2 1190 aa34.75■■■■□ 3.15
SDR39U1-209ENST00000554947 CCER1Q8TC90 406 aaPredicted RBP34.74■■■■□ 3.15
SDR39U1-209ENST00000554947 TIMELESSQ9UNS1 1208 aa34.74■■■■□ 3.15
SDR39U1-209ENST00000554947 SCAF1Q9H7N4 1312 aaKnown RBP34.74■■■■□ 3.15
SDR39U1-209ENST00000554947 ARHGEF28Q8N1W1 1705 aaKnown RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms