RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
LINC01397-201ENST00000554808 NEXMIFQ5QGS0 1516 aa11.74□□□□□ -0.53
LINC01397-201ENST00000554808 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
LINC01397-201ENST00000554808 FOXD1Q16676 465 aa11.73□□□□□ -0.53
LINC01397-201ENST00000554808 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
LINC01397-201ENST00000554808 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
LINC01397-201ENST00000554808 SPATA31E1Q6ZUB1 1445 aa11.72□□□□□ -0.53
LINC01397-201ENST00000554808 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
LINC01397-201ENST00000554808 SCAF11Q99590 1463 aaKnown RBP11.71□□□□□ -0.53
LINC01397-201ENST00000554808 TMEM2Q9UHN6 1383 aa11.71□□□□□ -0.53
LINC01397-201ENST00000554808 RPGRIP1LQ68CZ1 1315 aa11.71□□□□□ -0.53
LINC01397-201ENST00000554808 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
LINC01397-201ENST00000554808 MYOM2P54296 1465 aa11.7□□□□□ -0.54
LINC01397-201ENST00000554808 ZFYVE9O95405 1425 aa11.7□□□□□ -0.54
LINC01397-201ENST00000554808 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC01397-201ENST00000554808 MED14O60244 1454 aa11.7□□□□□ -0.54
LINC01397-201ENST00000554808 SOCS7O14512 581 aa11.69□□□□□ -0.54
LINC01397-201ENST00000554808 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
LINC01397-201ENST00000554808 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
LINC01397-201ENST00000554808 SETD1AO15047 1707 aaKnown RBP11.69□□□□□ -0.54
LINC01397-201ENST00000554808 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
LINC01397-201ENST00000554808 SETBP1Q9Y6X0 1596 aa11.68□□□□□ -0.54
LINC01397-201ENST00000554808 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
LINC01397-201ENST00000554808 CHD2O14647 1828 aaKnown RBP11.67□□□□□ -0.54
LINC01397-201ENST00000554808 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
LINC01397-201ENST00000554808 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
LINC01397-201ENST00000554808 NRXN3Q9Y4C0 1643 aa11.67□□□□□ -0.54
LINC01397-201ENST00000554808 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
LINC01397-201ENST00000554808 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
LINC01397-201ENST00000554808 ZNF335Q9H4Z2 1342 aaPredicted RBP11.65□□□□□ -0.54
LINC01397-201ENST00000554808 TONSLQ96HA7 1378 aa11.65□□□□□ -0.55
LINC01397-201ENST00000554808 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
LINC01397-201ENST00000554808 NRXN1Q9ULB1 1477 aa11.64□□□□□ -0.55
LINC01397-201ENST00000554808 KNDC1Q76NI1 1749 aa11.64□□□□□ -0.55
LINC01397-201ENST00000554808 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
LINC01397-201ENST00000554808 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
LINC01397-201ENST00000554808 MED1Q15648 1581 aaPredicted RBP11.63□□□□□ -0.55
LINC01397-201ENST00000554808 PPP1R15AO75807 674 aaPredicted RBP11.63□□□□□ -0.55
LINC01397-201ENST00000554808 TXNDC2Q86VQ3 553 aa11.63□□□□□ -0.55
LINC01397-201ENST00000554808 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
LINC01397-201ENST00000554808 RGL3Q3MIN7 710 aa11.62□□□□□ -0.55
LINC01397-201ENST00000554808 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
LINC01397-201ENST00000554808 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
LINC01397-201ENST00000554808 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
LINC01397-201ENST00000554808 NWD1Q149M9 1564 aa11.6□□□□□ -0.55
LINC01397-201ENST00000554808 PIK3R4Q99570 1358 aa11.6□□□□□ -0.55
LINC01397-201ENST00000554808 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
LINC01397-201ENST00000554808 SIN3AQ96ST3 1273 aa11.6□□□□□ -0.55
LINC01397-201ENST00000554808 LTKP29376 864 aa11.59□□□□□ -0.55
LINC01397-201ENST00000554808 XRN1Q8IZH2 1706 aaKnown RBP11.59□□□□□ -0.55
LINC01397-201ENST00000554808 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
LINC01397-201ENST00000554808 CPS1P31327 1500 aa11.58□□□□□ -0.56
LINC01397-201ENST00000554808 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
LINC01397-201ENST00000554808 ARHGEF28Q8N1W1 1705 aaKnown RBP11.57□□□□□ -0.56
LINC01397-201ENST00000554808 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
LINC01397-201ENST00000554808 ADAMTS13Q76LX8 1427 aa11.56□□□□□ -0.56
LINC01397-201ENST00000554808 NKTRP30414 1462 aaKnown RBP11.56□□□□□ -0.56
LINC01397-201ENST00000554808 L3MBTL2Q969R5 705 aa11.55□□□□□ -0.56
LINC01397-201ENST00000554808 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
LINC01397-201ENST00000554808 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
LINC01397-201ENST00000554808 BCANQ96GW7 911 aa11.54□□□□□ -0.56
LINC01397-201ENST00000554808 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
LINC01397-201ENST00000554808 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
LINC01397-201ENST00000554808 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
LINC01397-201ENST00000554808 DLC1Q96QB1 1528 aa11.53□□□□□ -0.56
LINC01397-201ENST00000554808 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
LINC01397-201ENST00000554808 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.57
LINC01397-201ENST00000554808 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.57
LINC01397-201ENST00000554808 KDM2AQ9Y2K7 1162 aa11.52□□□□□ -0.57
LINC01397-201ENST00000554808 TECPR2O15040 1411 aa11.51□□□□□ -0.57
LINC01397-201ENST00000554808 PTCH1Q13635 1447 aa11.51□□□□□ -0.57
LINC01397-201ENST00000554808 QRICH2Q9H0J4 1663 aa11.5□□□□□ -0.57
LINC01397-201ENST00000554808 HSPA1LP34931 641 aa11.49□□□□□ -0.57
LINC01397-201ENST00000554808 ZEB1P37275 1124 aaPredicted RBP11.49□□□□□ -0.57
LINC01397-201ENST00000554808 GPRASP1Q5JY77 1395 aa11.49□□□□□ -0.57
LINC01397-201ENST00000554808 YTHDC2Q9H6S0 1430 aaKnown RBP11.49□□□□□ -0.57
LINC01397-201ENST00000554808 NCOA3Q9Y6Q9 1424 aa11.49□□□□□ -0.57
LINC01397-201ENST00000554808 NALCNQ8IZF0 1738 aa11.49□□□□□ -0.57
LINC01397-201ENST00000554808 KCNA6P17658 529 aa11.48□□□□□ -0.57
LINC01397-201ENST00000554808 SLC26A8Q96RN1 970 aa11.48□□□□□ -0.57
LINC01397-201ENST00000554808 ROCK2O75116 1388 aaKnown RBP11.48□□□□□ -0.57
LINC01397-201ENST00000554808 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
LINC01397-201ENST00000554808 ITSN1Q15811 1721 aa11.47□□□□□ -0.57
LINC01397-201ENST00000554808 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
LINC01397-201ENST00000554808 METP08581 1390 aa11.47□□□□□ -0.57
LINC01397-201ENST00000554808 EIF3AQ14152 1382 aaKnown RBP11.47□□□□□ -0.57
LINC01397-201ENST00000554808 ABCC11Q96J66 1382 aa11.47□□□□□ -0.57
LINC01397-201ENST00000554808 ADGRB2O60241 1585 aa11.46□□□□□ -0.57
LINC01397-201ENST00000554808 LRRC7Q96NW7 1537 aa11.46□□□□□ -0.57
LINC01397-201ENST00000554808 CFAP70Q5T0N1 1121 aa11.46□□□□□ -0.57
LINC01397-201ENST00000554808 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.58
LINC01397-201ENST00000554808 PTPRUQ92729 1446 aa11.45□□□□□ -0.58
LINC01397-201ENST00000554808 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
LINC01397-201ENST00000554808 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
LINC01397-201ENST00000554808 SIRT1Q96EB6 747 aa11.45□□□□□ -0.58
LINC01397-201ENST00000554808 AMOTL2Q9Y2J4 779 aa11.44□□□□□ -0.58
LINC01397-201ENST00000554808 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
LINC01397-201ENST00000554808 CDC42BPGQ6DT37 1551 aa11.43□□□□□ -0.58
LINC01397-201ENST00000554808 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
LINC01397-201ENST00000554808 DCCP43146 1447 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms