RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	PPP1R15A	O75807	674 aa	Predicted RBP	40.93	■■■■■ 4.14
KTN1-215	ENST00000554567	CHGA	P10645	457 aa	Known RBP	40.9	■■■■■ 4.14
KTN1-215	ENST00000554567	HDGF	P51858	240 aa	Known RBP	40.89	■■■■■ 4.14
KTN1-215	ENST00000554567	MYO5B	Q9ULV0	1848 aa		40.88	■■■■■ 4.14
KTN1-215	ENST00000554567	RIMS2	Q9UQ26	1411 aa		40.87	■■■■■ 4.13
KTN1-215	ENST00000554567	ZFYVE9	O95405	1425 aa		40.86	■■■■■ 4.13
KTN1-215	ENST00000554567	NKTR	P30414	1462 aa	Known RBP	40.86	■■■■■ 4.13
KTN1-215	ENST00000554567	RGS17	Q9UGC6	210 aa	Predicted RBP	40.86	■■■■■ 4.13
KTN1-215	ENST00000554567	GCC2	Q8IWJ2	1684 aa		40.85	■■■■■ 4.13
KTN1-215	ENST00000554567	PLEKHG1	Q9ULL1	1385 aa		40.85	■■■■■ 4.13
KTN1-215	ENST00000554567	NWD1	Q149M9	1564 aa		40.84	■■■■■ 4.13
KTN1-215	ENST00000554567	ROBO1	Q9Y6N7	1651 aa		40.84	■■■■■ 4.13
KTN1-215	ENST00000554567	MSH6	P52701	1360 aa		40.84	■■■■■ 4.13
KTN1-215	ENST00000554567	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.81	■■■■■ 4.12
KTN1-215	ENST00000554567	TMEM131L	A2VDJ0	1609 aa		40.81	■■■■■ 4.12
KTN1-215	ENST00000554567	UNC13B	O14795	1591 aa		40.79	■■■■■ 4.12
KTN1-215	ENST00000554567	ITGAE	P38570	1179 aa		40.78	■■■■■ 4.12
KTN1-215	ENST00000554567	SLAIN2	Q9P270	581 aa		40.77	■■■■■ 4.12
KTN1-215	ENST00000554567	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	40.76	■■■■■ 4.12
KTN1-215	ENST00000554567	TBX22	Q9Y458	520 aa		40.74	■■■■■ 4.11
KTN1-215	ENST00000554567	CHD2	O14647	1828 aa	Known RBP	40.74	■■■■■ 4.11
KTN1-215	ENST00000554567		E9PCH4	1651 aa		40.73	■■■■■ 4.11
KTN1-215	ENST00000554567	ROCK1	Q13464	1354 aa		40.73	■■■■■ 4.11
KTN1-215	ENST00000554567	C14orf37	Q86TY3	774 aa		40.7	■■■■■ 4.11
KTN1-215	ENST00000554567	PPARGC1B	Q86YN6	1023 aa	Known RBP	40.69	■■■■■ 4.1
KTN1-215	ENST00000554567	NUP155	O75694	1391 aa		40.69	■■■■■ 4.1
KTN1-215	ENST00000554567	IQGAP3	Q86VI3	1631 aa		40.65	■■■■■ 4.1
KTN1-215	ENST00000554567	POTEA	Q6S8J7	498 aa		40.64	■■■■■ 4.1
KTN1-215	ENST00000554567	ADAMTS13	Q76LX8	1427 aa		40.62	■■■■■ 4.09
KTN1-215	ENST00000554567	PHLPP1	O60346	1717 aa		40.62	■■■■■ 4.09
KTN1-215	ENST00000554567	NCOA3	Q9Y6Q9	1424 aa		40.55	■■■■■ 4.08
KTN1-215	ENST00000554567	JCAD	Q9P266	1359 aa		40.54	■■■■■ 4.08
KTN1-215	ENST00000554567	DIP2A	Q14689	1571 aa		40.52	■■■■■ 4.08
KTN1-215	ENST00000554567	ATF3	P18847	181 aa		40.52	■■■■■ 4.08
KTN1-215	ENST00000554567	C19orf44	Q9H6X5	657 aa		40.52	■■■■■ 4.08
KTN1-215	ENST00000554567	PIK3R4	Q99570	1358 aa		40.51	■■■■■ 4.08
KTN1-215	ENST00000554567	CADPS2	Q86UW7	1296 aa		40.51	■■■■■ 4.08
KTN1-215	ENST00000554567	AMOTL2	Q9Y2J4	779 aa		40.51	■■■■■ 4.08
KTN1-215	ENST00000554567	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.47	■■■■■ 4.07
KTN1-215	ENST00000554567	TRPM2	O94759	1503 aa		40.46	■■■■■ 4.07
KTN1-215	ENST00000554567	ZNF326	Q5BKZ1	582 aa	Known RBP	40.45	■■■■■ 4.07
KTN1-215	ENST00000554567	PTPRU	Q92729	1446 aa		40.43	■■■■■ 4.06
KTN1-215	ENST00000554567	COL16A1	Q07092	1604 aa	Predicted RBP	40.43	■■■■■ 4.06
KTN1-215	ENST00000554567	MEX3C	Q5U5Q3	659 aa	Known RBP	40.37	■■■■■ 4.05
KTN1-215	ENST00000554567	SPHKAP	Q2M3C7	1700 aa		40.36	■■■■■ 4.05
KTN1-215	ENST00000554567	SETD1A	O15047	1707 aa	Known RBP	40.35	■■■■■ 4.05
KTN1-215	ENST00000554567	SPATA31A6	Q5VVP1	1343 aa		40.34	■■■■■ 4.05
KTN1-215	ENST00000554567	BRINP3	Q76B58	766 aa		40.32	■■■■■ 4.05
KTN1-215	ENST00000554567	NRXN3	Q9Y4C0	1643 aa		40.31	■■■■■ 4.04
KTN1-215	ENST00000554567	LRP6	O75581	1613 aa		40.3	■■■■■ 4.04
KTN1-215	ENST00000554567	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.3	■■■■■ 4.04
KTN1-215	ENST00000554567	SETBP1	Q9Y6X0	1596 aa		40.28	■■■■■ 4.04
KTN1-215	ENST00000554567	MET	P08581	1390 aa		40.27	■■■■■ 4.04
KTN1-215	ENST00000554567	XRN1	Q8IZH2	1706 aa	Known RBP	40.24	■■■■■ 4.03
KTN1-215	ENST00000554567	NUTM2B	A6NNL0	878 aa	Predicted RBP	40.22	■■■■■ 4.03
KTN1-215	ENST00000554567	NUTM2E	B1AL46	878 aa	Predicted RBP	40.22	■■■■■ 4.03
KTN1-215	ENST00000554567	NUTM2A	Q8IVF1	878 aa	Predicted RBP	40.22	■■■■■ 4.03
KTN1-215	ENST00000554567	DCC	P43146	1447 aa		40.22	■■■■■ 4.03
KTN1-215	ENST00000554567	ZNF772	Q68DY9	489 aa	Predicted RBP	40.21	■■■■■ 4.03
KTN1-215	ENST00000554567	CLTCL1	P53675	1640 aa		40.2	■■■■■ 4.03
KTN1-215	ENST00000554567	SHPRH	Q149N8	1683 aa		40.2	■■■■■ 4.03
KTN1-215	ENST00000554567	NEXMIF	Q5QGS0	1516 aa		40.16	■■■■■ 4.02
KTN1-215	ENST00000554567	ASXL1	Q8IXJ9	1541 aa		40.16	■■■■■ 4.02
KTN1-215	ENST00000554567	MST1R	Q04912	1400 aa		40.16	■■■■■ 4.02
KTN1-215	ENST00000554567	NAIP	Q13075	1403 aa		40.16	■■■■■ 4.02
KTN1-215	ENST00000554567	TRIM52	Q96A61	297 aa		40.15	■■■■■ 4.02
KTN1-215	ENST00000554567	RRBP1	Q9P2E9	1410 aa	Known RBP	40.14	■■■■■ 4.02
KTN1-215	ENST00000554567	KIF1B	O60333	1816 aa		40.1	■■■■■ 4.01
KTN1-215	ENST00000554567	DDX17	Q92841	729 aa	Known RBP	40.1	■■■■■ 4.01
KTN1-215	ENST00000554567	ADGRL3	Q9HAR2	1447 aa		40.08	■■■■■ 4.01
KTN1-215	ENST00000554567	LRRC59	Q96AG4	307 aa	Known RBP	40.07	■■■■■ 4.01
KTN1-215	ENST00000554567	SETD5	Q9C0A6	1442 aa		40.06	■■■■■ 4
KTN1-215	ENST00000554567	VGF	O15240	615 aa	Predicted RBP	40.04	■■■■■ 4
KTN1-215	ENST00000554567	RXRB	P28702	533 aa		40.04	■■■■■ 4
KTN1-215	ENST00000554567	NHSL1	Q5SYE7	1610 aa		40.02	■■■■■ 4
KTN1-215	ENST00000554567	NALCN	Q8IZF0	1738 aa		40.01	■■■■■ 4
KTN1-215	ENST00000554567	AFF2	P51816	1311 aa		40	■■■■□ 3.99
KTN1-215	ENST00000554567	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40	■■■■□ 3.99
KTN1-215	ENST00000554567	UPF1	Q92900	1129 aa	Known RBP eCLIP	39.94	■■■■□ 3.98
KTN1-215	ENST00000554567	C8orf37	Q96NL8	207 aa		39.94	■■■■□ 3.98
KTN1-215	ENST00000554567	HFM1	A2PYH4	1435 aa		39.93	■■■■□ 3.98
KTN1-215	ENST00000554567	ROBO2	Q9HCK4	1378 aa		39.93	■■■■□ 3.98
KTN1-215	ENST00000554567	C1orf167	Q5SNV9	1468 aa		39.93	■■■■□ 3.98
KTN1-215	ENST00000554567	PNPLA6	Q8IY17	1366 aa		39.92	■■■■□ 3.98
KTN1-215	ENST00000554567	RPGRIP1L	Q68CZ1	1315 aa		39.91	■■■■□ 3.98
KTN1-215	ENST00000554567	ORAI2	Q96SN7	254 aa		39.89	■■■■□ 3.98
KTN1-215	ENST00000554567	PTCH1	Q13635	1447 aa		39.89	■■■■□ 3.98
KTN1-215	ENST00000554567	FOXD1	Q16676	465 aa		39.87	■■■■□ 3.97
KTN1-215	ENST00000554567	ADAMTS2	O95450	1211 aa		39.85	■■■■□ 3.97
KTN1-215	ENST00000554567	QTRT2	Q9H974	415 aa	Known RBP	39.85	■■■■□ 3.97
KTN1-215	ENST00000554567	NGLY1	Q96IV0	654 aa		39.81	■■■■□ 3.96
KTN1-215	ENST00000554567	CDK12	Q9NYV4	1490 aa	Predicted RBP	39.8	■■■■□ 3.96
KTN1-215	ENST00000554567	PPL	O60437	1756 aa		39.79	■■■■□ 3.96
KTN1-215	ENST00000554567	SOS2	Q07890	1332 aa	Predicted RBP	39.77	■■■■□ 3.96
KTN1-215	ENST00000554567	RBM6	P78332	1123 aa	Known RBP	39.76	■■■■□ 3.96
KTN1-215	ENST00000554567	RGL3	Q3MIN7	710 aa		39.75	■■■■□ 3.95
KTN1-215	ENST00000554567	PRAG1	Q86YV5	1406 aa		39.73	■■■■□ 3.95
KTN1-215	ENST00000554567	ADGRF5	Q8IZF2	1346 aa		39.72	■■■■□ 3.95
KTN1-215	ENST00000554567	STK26	Q9P289	416 aa		39.71	■■■■□ 3.95
KTN1-215	ENST00000554567	LAMC1	P11047	1609 aa		39.71	■■■■□ 3.95

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