RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 TRPM2O94759 1503 aa26.48■■□□□ 1.83
PPP4R3A-203ENST00000554511 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
PPP4R3A-203ENST00000554511 ARHGAP23Q9P227 1491 aa26.47■■□□□ 1.83
PPP4R3A-203ENST00000554511 SLIT1O75093 1534 aa26.46■■□□□ 1.83
PPP4R3A-203ENST00000554511 STAG3Q9UJ98 1225 aa26.46■■□□□ 1.83
PPP4R3A-203ENST00000554511 IDI1Q13907 227 aa26.45■■□□□ 1.82
PPP4R3A-203ENST00000554511 HSPA1LP34931 641 aa26.44■■□□□ 1.82
PPP4R3A-203ENST00000554511 EID1Q9Y6B2 187 aa26.44■■□□□ 1.82
PPP4R3A-203ENST00000554511 PIK3C2BO00750 1634 aa26.43■■□□□ 1.82
PPP4R3A-203ENST00000554511 STRCP1A6NGW2 1772 aa26.42■■□□□ 1.82
PPP4R3A-203ENST00000554511 LRRC7Q96NW7 1537 aa26.41■■□□□ 1.82
PPP4R3A-203ENST00000554511 TMEM2Q9UHN6 1383 aa26.41■■□□□ 1.82
PPP4R3A-203ENST00000554511 SYNMO15061 1565 aa26.41■■□□□ 1.82
PPP4R3A-203ENST00000554511 CHGAP10645 457 aaKnown RBP26.4■■□□□ 1.82
PPP4R3A-203ENST00000554511 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
PPP4R3A-203ENST00000554511 SIN3AQ96ST3 1273 aa26.37■■□□□ 1.81
PPP4R3A-203ENST00000554511 ALKQ9UM73 1620 aa26.36■■□□□ 1.81
PPP4R3A-203ENST00000554511 SOCS7O14512 581 aa26.34■■□□□ 1.81
PPP4R3A-203ENST00000554511 CLTCL1P53675 1640 aa26.34■■□□□ 1.81
PPP4R3A-203ENST00000554511 HDGFP51858 240 aaKnown RBP26.33■■□□□ 1.81
PPP4R3A-203ENST00000554511 KDM5AP29375 1690 aaKnown RBP26.33■■□□□ 1.81
PPP4R3A-203ENST00000554511 ZNF326Q5BKZ1 582 aaKnown RBP26.32■■□□□ 1.8
PPP4R3A-203ENST00000554511 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
PPP4R3A-203ENST00000554511 RPGRIP1LQ68CZ1 1315 aa26.3■■□□□ 1.8
PPP4R3A-203ENST00000554511 KIF1BO60333 1816 aa26.3■■□□□ 1.8
PPP4R3A-203ENST00000554511 RGL3Q3MIN7 710 aa26.29■■□□□ 1.8
PPP4R3A-203ENST00000554511 ADGRB3O60242 1522 aa26.28■■□□□ 1.8
PPP4R3A-203ENST00000554511 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
PPP4R3A-203ENST00000554511 TONSLQ96HA7 1378 aa26.26■■□□□ 1.79
PPP4R3A-203ENST00000554511 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
PPP4R3A-203ENST00000554511 SPATA31E1Q6ZUB1 1445 aa26.25■■□□□ 1.79
PPP4R3A-203ENST00000554511 SENP3Q9H4L4 574 aaPredicted RBP26.25■■□□□ 1.79
PPP4R3A-203ENST00000554511 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.24■■□□□ 1.79
PPP4R3A-203ENST00000554511 TMEM131LA2VDJ0 1609 aa26.24■■□□□ 1.79
PPP4R3A-203ENST00000554511 KCNA6P17658 529 aa26.22■■□□□ 1.79
PPP4R3A-203ENST00000554511 BCANQ96GW7 911 aa26.21■■□□□ 1.79
PPP4R3A-203ENST00000554511 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.79
PPP4R3A-203ENST00000554511 VGFO15240 615 aaPredicted RBP26.2■■□□□ 1.78
PPP4R3A-203ENST00000554511 DCAF11Q8TEB1 546 aa26.19■■□□□ 1.78
PPP4R3A-203ENST00000554511 TMEM94Q12767 1356 aa26.19■■□□□ 1.78
PPP4R3A-203ENST00000554511 XIRP1Q702N8 1843 aaKnown RBP26.18■■□□□ 1.78
PPP4R3A-203ENST00000554511 L3MBTL2Q969R5 705 aa26.18■■□□□ 1.78
PPP4R3A-203ENST00000554511 PPP1R15AO75807 674 aaPredicted RBP26.16■■□□□ 1.78
PPP4R3A-203ENST00000554511 PROSER2Q86WR7 435 aaPredicted RBP26.16■■□□□ 1.78
PPP4R3A-203ENST00000554511 ZFYVE9O95405 1425 aa26.15■■□□□ 1.78
PPP4R3A-203ENST00000554511 RIMS2Q9UQ26 1411 aa26.15■■□□□ 1.78
PPP4R3A-203ENST00000554511 RBM33Q96EV2 1170 aaKnown RBP26.15■■□□□ 1.78
PPP4R3A-203ENST00000554511 ZEB1P37275 1124 aaPredicted RBP26.14■■□□□ 1.78
PPP4R3A-203ENST00000554511 KDM2AQ9Y2K7 1162 aa26.14■■□□□ 1.78
PPP4R3A-203ENST00000554511 MYO5BQ9ULV0 1848 aa26.12■■□□□ 1.77
PPP4R3A-203ENST00000554511 PLEKHG1Q9ULL1 1385 aa26.12■■□□□ 1.77
PPP4R3A-203ENST00000554511 NWD1Q149M9 1564 aa26.09■■□□□ 1.77
PPP4R3A-203ENST00000554511 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
PPP4R3A-203ENST00000554511 NKTRP30414 1462 aaKnown RBP26.09■■□□□ 1.77
PPP4R3A-203ENST00000554511 FAM135BQ49AJ0 1406 aa26.08■■□□□ 1.77
PPP4R3A-203ENST00000554511 NEXMIFQ5QGS0 1516 aa26.08■■□□□ 1.77
PPP4R3A-203ENST00000554511 NUTM2DQ5VT03 806 aaPredicted RBP26.07■■□□□ 1.76
PPP4R3A-203ENST00000554511 MYOM2P54296 1465 aa26.05■■□□□ 1.76
PPP4R3A-203ENST00000554511 TBX22Q9Y458 520 aa26.05■■□□□ 1.76
PPP4R3A-203ENST00000554511 PPLO60437 1756 aa26.03■■□□□ 1.76
PPP4R3A-203ENST00000554511 ADGRF5Q8IZF2 1346 aa26.02■■□□□ 1.76
PPP4R3A-203ENST00000554511 MSH6P52701 1360 aa26.02■■□□□ 1.76
PPP4R3A-203ENST00000554511 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
PPP4R3A-203ENST00000554511 IFT172Q9UG01 1749 aa26■■□□□ 1.75
PPP4R3A-203ENST00000554511 ADAMTS13Q76LX8 1427 aa25.99■■□□□ 1.75
PPP4R3A-203ENST00000554511 ROBO1Q9Y6N7 1651 aa25.97■■□□□ 1.75
PPP4R3A-203ENST00000554511 SLAIN2Q9P270 581 aa25.96■■□□□ 1.75
PPP4R3A-203ENST00000554511 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
PPP4R3A-203ENST00000554511 PRAG1Q86YV5 1406 aa25.95■■□□□ 1.74
PPP4R3A-203ENST00000554511 C14orf93Q9H972 538 aaKnown RBP25.94■■□□□ 1.74
PPP4R3A-203ENST00000554511 PIK3C2GO75747 1445 aa25.94■■□□□ 1.74
PPP4R3A-203ENST00000554511 PIK3R4Q99570 1358 aa25.93■■□□□ 1.74
PPP4R3A-203ENST00000554511 DIP2AQ14689 1571 aa25.92■■□□□ 1.74
PPP4R3A-203ENST00000554511 C14orf37Q86TY3 774 aa25.92■■□□□ 1.74
PPP4R3A-203ENST00000554511 NCOA3Q9Y6Q9 1424 aa25.91■■□□□ 1.74
PPP4R3A-203ENST00000554511 NBPF8Q3BBV2 869 aa25.9■■□□□ 1.74
PPP4R3A-203ENST00000554511 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
PPP4R3A-203ENST00000554511 SETBP1Q9Y6X0 1596 aa25.9■■□□□ 1.74
PPP4R3A-203ENST00000554511 RGS17Q9UGC6 210 aaPredicted RBP25.89■■□□□ 1.74
PPP4R3A-203ENST00000554511 AMOTL2Q9Y2J4 779 aa25.89■■□□□ 1.74
PPP4R3A-203ENST00000554511 C19orf44Q9H6X5 657 aa25.86■■□□□ 1.73
PPP4R3A-203ENST00000554511 PTPRUQ92729 1446 aa25.86■■□□□ 1.73
PPP4R3A-203ENST00000554511 LAMC1P11047 1609 aa25.85■■□□□ 1.73
PPP4R3A-203ENST00000554511 ROCK2O75116 1388 aaKnown RBP25.83■■□□□ 1.73
PPP4R3A-203ENST00000554511 ATF3P18847 181 aa25.83■■□□□ 1.73
PPP4R3A-203ENST00000554511 CADPS2Q86UW7 1296 aa25.83■■□□□ 1.73
PPP4R3A-203ENST00000554511 KIAA1210Q9ULL0 1709 aa25.83■■□□□ 1.72
PPP4R3A-203ENST00000554511 PHLPP1O60346 1717 aa25.81■■□□□ 1.72
PPP4R3A-203ENST00000554511 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
PPP4R3A-203ENST00000554511 NBPF1Q3BBV0 1214 aa25.8■■□□□ 1.72
PPP4R3A-203ENST00000554511 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.8■■□□□ 1.72
PPP4R3A-203ENST00000554511 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
PPP4R3A-203ENST00000554511 TMEM132EQ6IEE7 984 aa25.79■■□□□ 1.72
PPP4R3A-203ENST00000554511 CARD11Q9BXL7 1154 aa25.79■■□□□ 1.72
PPP4R3A-203ENST00000554511 JCADQ9P266 1359 aa25.79■■□□□ 1.72
PPP4R3A-203ENST00000554511 METP08581 1390 aa25.77■■□□□ 1.72
PPP4R3A-203ENST00000554511 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
PPP4R3A-203ENST00000554511 GPRASP1Q5JY77 1395 aa25.75■■□□□ 1.71
PPP4R3A-203ENST00000554511 POTEAQ6S8J7 498 aa25.74■■□□□ 1.71
PPP4R3A-203ENST00000554511 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms