RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 MYO5BQ9ULV0 1848 aa17.22■□□□□ 0.35
NPC2-205ENST00000554482 PPP1R15AO75807 674 aaPredicted RBP17.22■□□□□ 0.35
NPC2-205ENST00000554482 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
NPC2-205ENST00000554482 RBM33Q96EV2 1170 aaKnown RBP17.22■□□□□ 0.35
NPC2-205ENST00000554482 UNC13BO14795 1591 aa17.22■□□□□ 0.35
NPC2-205ENST00000554482 NWD1Q149M9 1564 aa17.21■□□□□ 0.35
NPC2-205ENST00000554482 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
NPC2-205ENST00000554482 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
NPC2-205ENST00000554482 RIMS2Q9UQ26 1411 aa17.19■□□□□ 0.34
NPC2-205ENST00000554482 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
NPC2-205ENST00000554482 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
NPC2-205ENST00000554482 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
NPC2-205ENST00000554482 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
NPC2-205ENST00000554482 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
NPC2-205ENST00000554482 E9PCH4 1651 aa17.17■□□□□ 0.34
NPC2-205ENST00000554482 ITGAEP38570 1179 aa17.17■□□□□ 0.34
NPC2-205ENST00000554482 MSH6P52701 1360 aa17.16■□□□□ 0.34
NPC2-205ENST00000554482 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
NPC2-205ENST00000554482 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
NPC2-205ENST00000554482 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
NPC2-205ENST00000554482 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
NPC2-205ENST00000554482 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
NPC2-205ENST00000554482 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
NPC2-205ENST00000554482 NUP155O75694 1391 aa17.12■□□□□ 0.33
NPC2-205ENST00000554482 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
NPC2-205ENST00000554482 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
NPC2-205ENST00000554482 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
NPC2-205ENST00000554482 PHLPP1O60346 1717 aa17.09■□□□□ 0.33
NPC2-205ENST00000554482 RGS17Q9UGC6 210 aaPredicted RBP17.08■□□□□ 0.32
NPC2-205ENST00000554482 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
NPC2-205ENST00000554482 SLAIN2Q9P270 581 aa17.07■□□□□ 0.32
NPC2-205ENST00000554482 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
NPC2-205ENST00000554482 TRPM2O94759 1503 aa17.05■□□□□ 0.32
NPC2-205ENST00000554482 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
NPC2-205ENST00000554482 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
NPC2-205ENST00000554482 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
NPC2-205ENST00000554482 JCADQ9P266 1359 aa17.02■□□□□ 0.31
NPC2-205ENST00000554482 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
NPC2-205ENST00000554482 COL16A1Q07092 1604 aaPredicted RBP17.01■□□□□ 0.31
NPC2-205ENST00000554482 ATF3P18847 181 aa17.01■□□□□ 0.31
NPC2-205ENST00000554482 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
NPC2-205ENST00000554482 POTEAQ6S8J7 498 aa17■□□□□ 0.31
NPC2-205ENST00000554482 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
NPC2-205ENST00000554482 AMOTL2Q9Y2J4 779 aa16.99■□□□□ 0.31
NPC2-205ENST00000554482 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
NPC2-205ENST00000554482 C19orf44Q9H6X5 657 aa16.98■□□□□ 0.31
NPC2-205ENST00000554482 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
NPC2-205ENST00000554482 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
NPC2-205ENST00000554482 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.31
NPC2-205ENST00000554482 CLTCL1P53675 1640 aa16.96■□□□□ 0.3
NPC2-205ENST00000554482 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.3
NPC2-205ENST00000554482 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
NPC2-205ENST00000554482 SETD1AO15047 1707 aaKnown RBP16.94■□□□□ 0.3
NPC2-205ENST00000554482 LRP6O75581 1613 aa16.93■□□□□ 0.3
NPC2-205ENST00000554482 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
NPC2-205ENST00000554482 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
NPC2-205ENST00000554482 NEXMIFQ5QGS0 1516 aa16.92■□□□□ 0.3
NPC2-205ENST00000554482 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
NPC2-205ENST00000554482 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
NPC2-205ENST00000554482 DCCP43146 1447 aa16.92■□□□□ 0.3
NPC2-205ENST00000554482 KIF1BO60333 1816 aa16.91■□□□□ 0.3
NPC2-205ENST00000554482 METP08581 1390 aa16.91■□□□□ 0.3
NPC2-205ENST00000554482 NAIPQ13075 1403 aa16.91■□□□□ 0.3
NPC2-205ENST00000554482 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
NPC2-205ENST00000554482 ASXL1Q8IXJ9 1541 aa16.91■□□□□ 0.3
NPC2-205ENST00000554482 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
NPC2-205ENST00000554482 MST1RQ04912 1400 aa16.88■□□□□ 0.29
NPC2-205ENST00000554482 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
NPC2-205ENST00000554482 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
NPC2-205ENST00000554482 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
NPC2-205ENST00000554482 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
NPC2-205ENST00000554482 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
NPC2-205ENST00000554482 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
NPC2-205ENST00000554482 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
NPC2-205ENST00000554482 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
NPC2-205ENST00000554482 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
NPC2-205ENST00000554482 SETD5Q9C0A6 1442 aa16.81■□□□□ 0.28
NPC2-205ENST00000554482 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
NPC2-205ENST00000554482 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
NPC2-205ENST00000554482 PTCH1Q13635 1447 aa16.8■□□□□ 0.28
NPC2-205ENST00000554482 LRRC59Q96AG4 307 aaKnown RBP16.79■□□□□ 0.28
NPC2-205ENST00000554482 PPLO60437 1756 aa16.79■□□□□ 0.28
NPC2-205ENST00000554482 AFF2P51816 1311 aa16.78■□□□□ 0.28
NPC2-205ENST00000554482 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
NPC2-205ENST00000554482 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.28
NPC2-205ENST00000554482 RXRBP28702 533 aa16.77■□□□□ 0.28
NPC2-205ENST00000554482 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.27
NPC2-205ENST00000554482 RPGRIP1LQ68CZ1 1315 aa16.76■□□□□ 0.27
NPC2-205ENST00000554482 C8orf37Q96NL8 207 aa16.76■□□□□ 0.27
NPC2-205ENST00000554482 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
NPC2-205ENST00000554482 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
NPC2-205ENST00000554482 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
NPC2-205ENST00000554482 PRAG1Q86YV5 1406 aa16.71■□□□□ 0.27
NPC2-205ENST00000554482 UPF1Q92900 1129 aaKnown RBP eCLIP16.71■□□□□ 0.27
NPC2-205ENST00000554482 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
NPC2-205ENST00000554482 LAMC1P11047 1609 aa16.7■□□□□ 0.26
NPC2-205ENST00000554482 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
NPC2-205ENST00000554482 CDC42BPGQ6DT37 1551 aa16.69■□□□□ 0.26
NPC2-205ENST00000554482 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
NPC2-205ENST00000554482 ADGRF5Q8IZF2 1346 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms