RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 MTUS2Q5JR59 1369 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 TONSLQ96HA7 1378 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 UGGT2Q9NYU1 1516 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 HECW1Q76N89 1606 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 FAM13BQ9NYF5 915 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 NAIPQ13075 1403 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 SMG6Q86US8 1419 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 DDX10Q13206 875 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-211ENST00000554455 BSDC1Q9NW68 430 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-211ENST00000554455 POGKQ9P215 609 aa10.81□□□□□ -0.68
HNRNPC-211ENST00000554455 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-211ENST00000554455 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
HNRNPC-211ENST00000554455 E9PSI1 815 aa10.8□□□□□ -0.68
HNRNPC-211ENST00000554455 PTPRKQ15262 1439 aa10.8□□□□□ -0.68
HNRNPC-211ENST00000554455 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
HNRNPC-211ENST00000554455 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-211ENST00000554455 CGNQ9P2M7 1197 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-211ENST00000554455 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
HNRNPC-211ENST00000554455 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
HNRNPC-211ENST00000554455 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-211ENST00000554455 MYH16Q9H6N6 1097 aa10.78□□□□□ -0.68
HNRNPC-211ENST00000554455 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
HNRNPC-211ENST00000554455 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-211ENST00000554455 LMOD3Q0VAK6 560 aa10.77□□□□□ -0.69
HNRNPC-211ENST00000554455 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.69
HNRNPC-211ENST00000554455 BANK1Q8NDB2 785 aa10.77□□□□□ -0.69
HNRNPC-211ENST00000554455 CEP83Q9Y592 693 aa10.77□□□□□ -0.69
HNRNPC-211ENST00000554455 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
HNRNPC-211ENST00000554455 HS1BP3Q53T59 392 aa10.76□□□□□ -0.69
HNRNPC-211ENST00000554455 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
HNRNPC-211ENST00000554455 MYCBPQ99417 103 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-211ENST00000554455 NESP48681 1621 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 UQCRHLA0A096LP55 91 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 DCAF8L1A6NGE4 600 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 IRF6O14896 467 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 ZBTB22O15209 634 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 UQCRHP07919 91 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 CTR9Q6PD62 1173 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 OTUD6BQ8N6M0 293 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 KIF3AQ9Y496 699 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 RAD50Q92878 1312 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 MFAP1P55081 439 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 GABPB1Q06547 395 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 SEMA3FQ13275 785 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 AEBP1Q8IUX7 1158 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 MIA2Q96PC5 1412 aa10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-211ENST00000554455 TIGD1Q96MW7 591 aa10.74□□□□□ -0.69
HNRNPC-211ENST00000554455 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
HNRNPC-211ENST00000554455 PDS5BQ9NTI5 1447 aa10.73□□□□□ -0.69
HNRNPC-211ENST00000554455 MAGI3Q5TCQ9 1506 aa10.73□□□□□ -0.69
HNRNPC-211ENST00000554455 ZNF500O60304 480 aaPredicted RBP10.73□□□□□ -0.69
HNRNPC-211ENST00000554455 PANK2Q9BZ23 570 aa10.73□□□□□ -0.69
HNRNPC-211ENST00000554455 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-211ENST00000554455 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
HNRNPC-211ENST00000554455 ZKSCAN8Q15776 578 aaPredicted RBP10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 CSPP1Q1MSJ5 1256 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 CASC1Q6TDU7 716 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 CREBRFQ8IUR6 639 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 BRMS1Q9HCU9 246 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
HNRNPC-211ENST00000554455 CCDC172P0C7W6 258 aa10.71□□□□□ -0.69
HNRNPC-211ENST00000554455 SSR1P43307 286 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-211ENST00000554455 KCNJ4P48050 445 aa10.71□□□□□ -0.69
HNRNPC-211ENST00000554455 SASS6Q6UVJ0 657 aa10.71□□□□□ -0.69
HNRNPC-211ENST00000554455 PPP1R9BQ96SB3 815 aa10.71□□□□□ -0.69
HNRNPC-211ENST00000554455 PBRM1Q86U86 1689 aa10.71□□□□□ -0.7
HNRNPC-211ENST00000554455 IQGAP2Q13576 1575 aa10.71□□□□□ -0.7
HNRNPC-211ENST00000554455 KIF1CO43896 1103 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 SIRT1Q96EB6 747 aa10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 WDR62O43379 1518 aa10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 DENND4BO75064 1496 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 IBTKQ9P2D0 1353 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 CCDC173Q0VFZ6 552 aa10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 CALCOCO1Q9P1Z2 691 aa10.7□□□□□ -0.7
HNRNPC-211ENST00000554455 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-211ENST00000554455 GOLIM4O00461 696 aa10.69□□□□□ -0.7
HNRNPC-211ENST00000554455 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
HNRNPC-211ENST00000554455 TRHP20396 242 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-211ENST00000554455 CT47A1Q5JQC4 288 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-211ENST00000554455 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
HNRNPC-211ENST00000554455 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
HNRNPC-211ENST00000554455 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
HNRNPC-211ENST00000554455 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
HNRNPC-211ENST00000554455 CAPN2P17655 700 aa10.68□□□□□ -0.7
HNRNPC-211ENST00000554455 GTF2F1P35269 517 aaKnown RBP eCLIP10.68□□□□□ -0.7
HNRNPC-211ENST00000554455 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
HNRNPC-211ENST00000554455 CCDC144AA2RUR9 1427 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms