RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 NWD1Q149M9 1564 aa21.04■□□□□ 0.96
RIPK3-202ENST00000554338 SLC26A8Q96RN1 970 aa21.03■□□□□ 0.96
RIPK3-202ENST00000554338 RIMS2Q9UQ26 1411 aa21.02■□□□□ 0.96
RIPK3-202ENST00000554338 TMEM94Q12767 1356 aa21■□□□□ 0.95
RIPK3-202ENST00000554338 NUP155O75694 1391 aa20.99■□□□□ 0.95
RIPK3-202ENST00000554338 PLEKHG1Q9ULL1 1385 aa20.99■□□□□ 0.95
RIPK3-202ENST00000554338 SOCS7O14512 581 aa20.99■□□□□ 0.95
RIPK3-202ENST00000554338 KCNA6P17658 529 aa20.99■□□□□ 0.95
RIPK3-202ENST00000554338 NKTRP30414 1462 aaKnown RBP20.99■□□□□ 0.95
RIPK3-202ENST00000554338 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
RIPK3-202ENST00000554338 RRBP1Q9P2E9 1410 aaKnown RBP20.97■□□□□ 0.95
RIPK3-202ENST00000554338 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
RIPK3-202ENST00000554338 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
RIPK3-202ENST00000554338 RBM33Q96EV2 1170 aaKnown RBP20.94■□□□□ 0.94
RIPK3-202ENST00000554338 BCANQ96GW7 911 aa20.94■□□□□ 0.94
RIPK3-202ENST00000554338 PROSER2Q86WR7 435 aaPredicted RBP20.92■□□□□ 0.94
RIPK3-202ENST00000554338 CHD2O14647 1828 aaKnown RBP20.91■□□□□ 0.94
RIPK3-202ENST00000554338 ADAMTS13Q76LX8 1427 aa20.91■□□□□ 0.94
RIPK3-202ENST00000554338 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
RIPK3-202ENST00000554338 FAM135BQ49AJ0 1406 aa20.9■□□□□ 0.94
RIPK3-202ENST00000554338 NUTM2DQ5VT03 806 aaPredicted RBP20.9■□□□□ 0.94
RIPK3-202ENST00000554338 DIP2AQ14689 1571 aa20.89■□□□□ 0.93
RIPK3-202ENST00000554338 NAIPQ13075 1403 aa20.88■□□□□ 0.93
RIPK3-202ENST00000554338 HDGFP51858 240 aaKnown RBP20.88■□□□□ 0.93
RIPK3-202ENST00000554338 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.88■□□□□ 0.93
RIPK3-202ENST00000554338 ROBO1Q9Y6N7 1651 aa20.88■□□□□ 0.93
RIPK3-202ENST00000554338 TBX22Q9Y458 520 aa20.86■□□□□ 0.93
RIPK3-202ENST00000554338 MSH6P52701 1360 aa20.85■□□□□ 0.93
RIPK3-202ENST00000554338 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
RIPK3-202ENST00000554338 NRXN3Q9Y4C0 1643 aa20.82■□□□□ 0.92
RIPK3-202ENST00000554338 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
RIPK3-202ENST00000554338 TRPM2O94759 1503 aa20.82■□□□□ 0.92
RIPK3-202ENST00000554338 PIK3R4Q99570 1358 aa20.82■□□□□ 0.92
RIPK3-202ENST00000554338 PTPRUQ92729 1446 aa20.8■□□□□ 0.92
RIPK3-202ENST00000554338 SETBP1Q9Y6X0 1596 aa20.8■□□□□ 0.92
RIPK3-202ENST00000554338 HFM1A2PYH4 1435 aa20.79■□□□□ 0.92
RIPK3-202ENST00000554338 NCOA3Q9Y6Q9 1424 aa20.78■□□□□ 0.92
RIPK3-202ENST00000554338 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.92
RIPK3-202ENST00000554338 XRN1Q8IZH2 1706 aaKnown RBP20.76■□□□□ 0.91
RIPK3-202ENST00000554338 SLAIN2Q9P270 581 aa20.75■□□□□ 0.91
RIPK3-202ENST00000554338 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
RIPK3-202ENST00000554338 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
RIPK3-202ENST00000554338 PHLPP1O60346 1717 aa20.73■□□□□ 0.91
RIPK3-202ENST00000554338 AMOTL2Q9Y2J4 779 aa20.73■□□□□ 0.91
RIPK3-202ENST00000554338 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
RIPK3-202ENST00000554338 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
RIPK3-202ENST00000554338 RGS17Q9UGC6 210 aaPredicted RBP20.71■□□□□ 0.91
RIPK3-202ENST00000554338 METP08581 1390 aa20.71■□□□□ 0.91
RIPK3-202ENST00000554338 KIF1BO60333 1816 aa20.7■□□□□ 0.9
RIPK3-202ENST00000554338 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
RIPK3-202ENST00000554338 C19orf44Q9H6X5 657 aa20.68■□□□□ 0.9
RIPK3-202ENST00000554338 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
RIPK3-202ENST00000554338 AHDC1Q5TGY3 1603 aaPredicted RBP20.67■□□□□ 0.9
RIPK3-202ENST00000554338 ATF3P18847 181 aa20.66■□□□□ 0.9
RIPK3-202ENST00000554338 JCADQ9P266 1359 aa20.66■□□□□ 0.9
RIPK3-202ENST00000554338 DCCP43146 1447 aa20.66■□□□□ 0.9
RIPK3-202ENST00000554338 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
RIPK3-202ENST00000554338 SETD1AO15047 1707 aaKnown RBP20.64■□□□□ 0.9
RIPK3-202ENST00000554338 MST1RQ04912 1400 aa20.61■□□□□ 0.89
RIPK3-202ENST00000554338 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
RIPK3-202ENST00000554338 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
RIPK3-202ENST00000554338 ASXL1Q8IXJ9 1541 aa20.6■□□□□ 0.89
RIPK3-202ENST00000554338 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
RIPK3-202ENST00000554338 LRP6O75581 1613 aa20.6■□□□□ 0.89
RIPK3-202ENST00000554338 PPLO60437 1756 aa20.59■□□□□ 0.89
RIPK3-202ENST00000554338 FOXD1Q16676 465 aa20.59■□□□□ 0.89
RIPK3-202ENST00000554338 POTEAQ6S8J7 498 aa20.59■□□□□ 0.89
RIPK3-202ENST00000554338 PTCH1Q13635 1447 aa20.58■□□□□ 0.88
RIPK3-202ENST00000554338 SHPRHQ149N8 1683 aa20.58■□□□□ 0.88
RIPK3-202ENST00000554338 PRAG1Q86YV5 1406 aa20.56■□□□□ 0.88
RIPK3-202ENST00000554338 NHSL1Q5SYE7 1610 aa20.56■□□□□ 0.88
RIPK3-202ENST00000554338 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
RIPK3-202ENST00000554338 VGFO15240 615 aaPredicted RBP20.55■□□□□ 0.88
RIPK3-202ENST00000554338 ROBO2Q9HCK4 1378 aa20.55■□□□□ 0.88
RIPK3-202ENST00000554338 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
RIPK3-202ENST00000554338 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
RIPK3-202ENST00000554338 SPATA31E1Q6ZUB1 1445 aa20.53■□□□□ 0.88
RIPK3-202ENST00000554338 MPHOSPH9Q99550 1183 aa20.5■□□□□ 0.87
RIPK3-202ENST00000554338 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
RIPK3-202ENST00000554338 IFT172Q9UG01 1749 aa20.49■□□□□ 0.87
RIPK3-202ENST00000554338 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
RIPK3-202ENST00000554338 ADGRF5Q8IZF2 1346 aa20.48■□□□□ 0.87
RIPK3-202ENST00000554338 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
RIPK3-202ENST00000554338 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
RIPK3-202ENST00000554338 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
RIPK3-202ENST00000554338 LAMC1P11047 1609 aa20.44■□□□□ 0.86
RIPK3-202ENST00000554338 PNPLA6Q8IY17 1366 aa20.43■□□□□ 0.86
RIPK3-202ENST00000554338 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
RIPK3-202ENST00000554338 PIK3C2GO75747 1445 aa20.43■□□□□ 0.86
RIPK3-202ENST00000554338 TECPR2O15040 1411 aa20.42■□□□□ 0.86
RIPK3-202ENST00000554338 CDC42BPGQ6DT37 1551 aa20.42■□□□□ 0.86
RIPK3-202ENST00000554338 NUTM2BA6NNL0 878 aaPredicted RBP20.41■□□□□ 0.86
RIPK3-202ENST00000554338 NUTM2EB1AL46 878 aaPredicted RBP20.41■□□□□ 0.86
RIPK3-202ENST00000554338 NUTM2AQ8IVF1 878 aaPredicted RBP20.41■□□□□ 0.86
RIPK3-202ENST00000554338 LRRC59Q96AG4 307 aaKnown RBP20.4■□□□□ 0.86
RIPK3-202ENST00000554338 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.86
RIPK3-202ENST00000554338 LRPPRCP42704 1394 aaKnown RBP20.39■□□□□ 0.85
RIPK3-202ENST00000554338 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.85
RIPK3-202ENST00000554338 ORAI2Q96SN7 254 aa20.39■□□□□ 0.85
RIPK3-202ENST00000554338 ZNF772Q68DY9 489 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms