RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 ITGAEP38570 1179 aa24.22■■□□□ 1.47
TUBB3-203ENST00000553967 ZFYVE9O95405 1425 aa24.2■■□□□ 1.46
TUBB3-203ENST00000553967 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
TUBB3-203ENST00000553967 HDGFP51858 240 aaKnown RBP24.19■■□□□ 1.46
TUBB3-203ENST00000553967 PROSER2Q86WR7 435 aaPredicted RBP24.19■■□□□ 1.46
TUBB3-203ENST00000553967 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
TUBB3-203ENST00000553967 TMEM131LA2VDJ0 1609 aa24.18■■□□□ 1.46
TUBB3-203ENST00000553967 E9PCH4 1651 aa24.18■■□□□ 1.46
TUBB3-203ENST00000553967 PLEKHG1Q9ULL1 1385 aa24.17■■□□□ 1.46
TUBB3-203ENST00000553967 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
TUBB3-203ENST00000553967 IQGAP3Q86VI3 1631 aa24.17■■□□□ 1.46
TUBB3-203ENST00000553967 NUP155O75694 1391 aa24.16■■□□□ 1.46
TUBB3-203ENST00000553967 CHGAP10645 457 aaKnown RBP24.16■■□□□ 1.46
TUBB3-203ENST00000553967 RBM33Q96EV2 1170 aaKnown RBP24.16■■□□□ 1.46
TUBB3-203ENST00000553967 NKTRP30414 1462 aaKnown RBP24.14■■□□□ 1.46
TUBB3-203ENST00000553967 NWD1Q149M9 1564 aa24.14■■□□□ 1.45
TUBB3-203ENST00000553967 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
TUBB3-203ENST00000553967 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.13■■□□□ 1.45
TUBB3-203ENST00000553967 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
TUBB3-203ENST00000553967 NUTM2DQ5VT03 806 aaPredicted RBP24.09■■□□□ 1.45
TUBB3-203ENST00000553967 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
TUBB3-203ENST00000553967 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
TUBB3-203ENST00000553967 MSH6P52701 1360 aa24.07■■□□□ 1.44
TUBB3-203ENST00000553967 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
TUBB3-203ENST00000553967 ADAMTS13Q76LX8 1427 aa24.03■■□□□ 1.44
TUBB3-203ENST00000553967 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
TUBB3-203ENST00000553967 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
TUBB3-203ENST00000553967 DIP2AQ14689 1571 aa24■■□□□ 1.43
TUBB3-203ENST00000553967 PIK3R4Q99570 1358 aa23.99■■□□□ 1.43
TUBB3-203ENST00000553967 NCOA3Q9Y6Q9 1424 aa23.98■■□□□ 1.43
TUBB3-203ENST00000553967 SPHKAPQ2M3C7 1700 aa23.97■■□□□ 1.43
TUBB3-203ENST00000553967 C14orf37Q86TY3 774 aa23.97■■□□□ 1.43
TUBB3-203ENST00000553967 NAIPQ13075 1403 aa23.94■■□□□ 1.42
TUBB3-203ENST00000553967 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
TUBB3-203ENST00000553967 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
TUBB3-203ENST00000553967 TRPM2O94759 1503 aa23.94■■□□□ 1.42
TUBB3-203ENST00000553967 AMOTL2Q9Y2J4 779 aa23.93■■□□□ 1.42
TUBB3-203ENST00000553967 C19orf44Q9H6X5 657 aa23.92■■□□□ 1.42
TUBB3-203ENST00000553967 PTPRUQ92729 1446 aa23.91■■□□□ 1.42
TUBB3-203ENST00000553967 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
TUBB3-203ENST00000553967 ATF3P18847 181 aa23.89■■□□□ 1.41
TUBB3-203ENST00000553967 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
TUBB3-203ENST00000553967 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
TUBB3-203ENST00000553967 SETBP1Q9Y6X0 1596 aa23.88■■□□□ 1.41
TUBB3-203ENST00000553967 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
TUBB3-203ENST00000553967 CLTCL1P53675 1640 aa23.87■■□□□ 1.41
TUBB3-203ENST00000553967 JCADQ9P266 1359 aa23.86■■□□□ 1.41
TUBB3-203ENST00000553967 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
TUBB3-203ENST00000553967 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
TUBB3-203ENST00000553967 METP08581 1390 aa23.83■■□□□ 1.41
TUBB3-203ENST00000553967 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
TUBB3-203ENST00000553967 COL16A1Q07092 1604 aaPredicted RBP23.82■■□□□ 1.4
TUBB3-203ENST00000553967 NEXMIFQ5QGS0 1516 aa23.82■■□□□ 1.4
TUBB3-203ENST00000553967 KIF1BO60333 1816 aa23.8■■□□□ 1.4
TUBB3-203ENST00000553967 POTEAQ6S8J7 498 aa23.8■■□□□ 1.4
TUBB3-203ENST00000553967 DCCP43146 1447 aa23.79■■□□□ 1.4
TUBB3-203ENST00000553967 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
TUBB3-203ENST00000553967 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
TUBB3-203ENST00000553967 BRINP3Q76B58 766 aa23.77■■□□□ 1.4
TUBB3-203ENST00000553967 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
TUBB3-203ENST00000553967 SPATA31A6Q5VVP1 1343 aa23.74■■□□□ 1.39
TUBB3-203ENST00000553967 MST1RQ04912 1400 aa23.72■■□□□ 1.39
TUBB3-203ENST00000553967 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
TUBB3-203ENST00000553967 RPGRIP1LQ68CZ1 1315 aa23.71■■□□□ 1.39
TUBB3-203ENST00000553967 LRP6O75581 1613 aa23.7■■□□□ 1.38
TUBB3-203ENST00000553967 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
TUBB3-203ENST00000553967 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TUBB3-203ENST00000553967 MEX3CQ5U5Q3 659 aaKnown RBP23.68■■□□□ 1.38
TUBB3-203ENST00000553967 FOXD1Q16676 465 aa23.67■■□□□ 1.38
TUBB3-203ENST00000553967 NALCNQ8IZF0 1738 aa23.65■■□□□ 1.38
TUBB3-203ENST00000553967 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.38
TUBB3-203ENST00000553967 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
TUBB3-203ENST00000553967 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.37
TUBB3-203ENST00000553967 PPLO60437 1756 aa23.63■■□□□ 1.37
TUBB3-203ENST00000553967 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
TUBB3-203ENST00000553967 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
TUBB3-203ENST00000553967 ZNF772Q68DY9 489 aaPredicted RBP23.62■■□□□ 1.37
TUBB3-203ENST00000553967 NUTM2BA6NNL0 878 aaPredicted RBP23.61■■□□□ 1.37
TUBB3-203ENST00000553967 NUTM2EB1AL46 878 aaPredicted RBP23.61■■□□□ 1.37
TUBB3-203ENST00000553967 NUTM2AQ8IVF1 878 aaPredicted RBP23.61■■□□□ 1.37
TUBB3-203ENST00000553967 LRRC59Q96AG4 307 aaKnown RBP23.61■■□□□ 1.37
TUBB3-203ENST00000553967 CCDC144AA2RUR9 1427 aa23.6■■□□□ 1.37
TUBB3-203ENST00000553967 DDX17Q92841 729 aaKnown RBP23.6■■□□□ 1.37
TUBB3-203ENST00000553967 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
TUBB3-203ENST00000553967 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
TUBB3-203ENST00000553967 C1orf167Q5SNV9 1468 aa23.59■■□□□ 1.37
TUBB3-203ENST00000553967 RGL3Q3MIN7 710 aa23.57■■□□□ 1.36
TUBB3-203ENST00000553967 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
TUBB3-203ENST00000553967 SPATA31E1Q6ZUB1 1445 aa23.55■■□□□ 1.36
TUBB3-203ENST00000553967 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
TUBB3-203ENST00000553967 ORAI2Q96SN7 254 aa23.53■■□□□ 1.36
TUBB3-203ENST00000553967 ANKRD30BQ9BXX2 1392 aa23.52■■□□□ 1.36
TUBB3-203ENST00000553967 AFF2P51816 1311 aa23.51■■□□□ 1.35
TUBB3-203ENST00000553967 LAMC1P11047 1609 aa23.49■■□□□ 1.35
TUBB3-203ENST00000553967 RXRBP28702 533 aa23.49■■□□□ 1.35
TUBB3-203ENST00000553967 SOS2Q07890 1332 aaPredicted RBP23.49■■□□□ 1.35
TUBB3-203ENST00000553967 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
TUBB3-203ENST00000553967 STK26Q9P289 416 aa23.48■■□□□ 1.35
TUBB3-203ENST00000553967 C8orf37Q96NL8 207 aa23.47■■□□□ 1.35
TUBB3-203ENST00000553967 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms