RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 OXER1Q8TDS5 423 aa9.95□□□□□ -0.82
SMARCE1P3-201ENST00000553649 DISP1Q96F81 1524 aa9.95□□□□□ -0.82
SMARCE1P3-201ENST00000553649 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1P3-201ENST00000553649 TBC1D12O60347 775 aa9.93□□□□□ -0.82
SMARCE1P3-201ENST00000553649 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
SMARCE1P3-201ENST00000553649 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
SMARCE1P3-201ENST00000553649 PTPRTO14522 1441 aa9.92□□□□□ -0.82
SMARCE1P3-201ENST00000553649 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1P3-201ENST00000553649 STRCQ7RTU9 1775 aa9.92□□□□□ -0.82
SMARCE1P3-201ENST00000553649 ZNF454Q8N9F8 522 aa9.91□□□□□ -0.82
SMARCE1P3-201ENST00000553649 UPF1Q92900 1129 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMARCE1P3-201ENST00000553649 SLC4A5Q9BY07 1137 aa9.91□□□□□ -0.82
SMARCE1P3-201ENST00000553649 IQGAP2Q13576 1575 aa9.91□□□□□ -0.82
SMARCE1P3-201ENST00000553649 FRMPD1Q5SYB0 1578 aa9.91□□□□□ -0.82
SMARCE1P3-201ENST00000553649 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
SMARCE1P3-201ENST00000553649 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
SMARCE1P3-201ENST00000553649 IFFO2Q5TF58 517 aa9.89□□□□□ -0.83
SMARCE1P3-201ENST00000553649 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
SMARCE1P3-201ENST00000553649 HS6ST3Q8IZP7 471 aa9.89□□□□□ -0.83
SMARCE1P3-201ENST00000553649 UGGT2Q9NYU1 1516 aa9.88□□□□□ -0.83
SMARCE1P3-201ENST00000553649 UBAP1LF5GYI3 381 aa9.88□□□□□ -0.83
SMARCE1P3-201ENST00000553649 FOSBP53539 338 aa9.88□□□□□ -0.83
SMARCE1P3-201ENST00000553649 KIF27Q86VH2 1401 aa9.88□□□□□ -0.83
SMARCE1P3-201ENST00000553649 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
SMARCE1P3-201ENST00000553649 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
SMARCE1P3-201ENST00000553649 TTC37Q6PGP7 1564 aa9.87□□□□□ -0.83
SMARCE1P3-201ENST00000553649 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1P3-201ENST00000553649 CRISPLD2Q9H0B8 497 aa9.86□□□□□ -0.83
SMARCE1P3-201ENST00000553649 CARMIL1Q5VZK9 1371 aa9.86□□□□□ -0.83
SMARCE1P3-201ENST00000553649 A0A0G2JS52 829 aa9.85□□□□□ -0.83
SMARCE1P3-201ENST00000553649 RGS20O76081 388 aa9.85□□□□□ -0.83
SMARCE1P3-201ENST00000553649 HSPA1LP34931 641 aa9.85□□□□□ -0.83
SMARCE1P3-201ENST00000553649 PREX1Q8TCU6 1659 aa9.84□□□□□ -0.83
SMARCE1P3-201ENST00000553649 POGZQ7Z3K3 1410 aa9.84□□□□□ -0.83
SMARCE1P3-201ENST00000553649 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1P3-201ENST00000553649 KIAA0556O60303 1618 aa9.84□□□□□ -0.83
SMARCE1P3-201ENST00000553649 NEO1Q92859 1461 aa9.84□□□□□ -0.83
SMARCE1P3-201ENST00000553649 SIGLEC1Q9BZZ2 1709 aa9.83□□□□□ -0.84
SMARCE1P3-201ENST00000553649 CEBPAP49715 358 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1P3-201ENST00000553649 WNT2BQ93097 391 aa9.82□□□□□ -0.84
SMARCE1P3-201ENST00000553649 FANCAO15360 1455 aa9.82□□□□□ -0.84
SMARCE1P3-201ENST00000553649 PTPREP23469 700 aa9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 MLECQ14165 292 aa9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 ADAM33Q9BZ11 813 aa9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 UHRF1BP1Q6BDS2 1440 aa9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
SMARCE1P3-201ENST00000553649 ABCA8O94911 1581 aa9.8□□□□□ -0.84
SMARCE1P3-201ENST00000553649 AKNAQ7Z591 1439 aa9.8□□□□□ -0.84
SMARCE1P3-201ENST00000553649 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
SMARCE1P3-201ENST00000553649 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
SMARCE1P3-201ENST00000553649 ARHGEF12Q9NZN5 1544 aa9.78□□□□□ -0.84
SMARCE1P3-201ENST00000553649 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
SMARCE1P3-201ENST00000553649 FHOD3Q2V2M9 1422 aa9.78□□□□□ -0.84
SMARCE1P3-201ENST00000553649 ZNF335Q9H4Z2 1342 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1P3-201ENST00000553649 NCOA1Q15788 1441 aa9.77□□□□□ -0.85
SMARCE1P3-201ENST00000553649 RGS17Q9UGC6 210 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1P3-201ENST00000553649 FER1L4A9Z1Z3 1794 aa9.76□□□□□ -0.85
SMARCE1P3-201ENST00000553649 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
SMARCE1P3-201ENST00000553649 EVI5O60447 810 aa9.76□□□□□ -0.85
SMARCE1P3-201ENST00000553649 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
SMARCE1P3-201ENST00000553649 DENND4BO75064 1496 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1P3-201ENST00000553649 ZMYM4Q5VZL5 1548 aa9.74□□□□□ -0.85
SMARCE1P3-201ENST00000553649 ZFYVE16Q7Z3T8 1539 aa9.74□□□□□ -0.85
SMARCE1P3-201ENST00000553649 PIP4K2BP78356 416 aa9.72□□□□□ -0.85
SMARCE1P3-201ENST00000553649 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
SMARCE1P3-201ENST00000553649 RICTORQ6R327 1708 aa9.72□□□□□ -0.85
SMARCE1P3-201ENST00000553649 ATP10BO94823 1461 aa9.72□□□□□ -0.85
SMARCE1P3-201ENST00000553649 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
SMARCE1P3-201ENST00000553649 ARID3CA6NKF2 412 aa9.71□□□□□ -0.86
SMARCE1P3-201ENST00000553649 COL9A1P20849 921 aa9.71□□□□□ -0.86
SMARCE1P3-201ENST00000553649 NBPF3Q9H094 633 aa9.71□□□□□ -0.86
SMARCE1P3-201ENST00000553649 MAGI2Q86UL8 1455 aa9.71□□□□□ -0.86
SMARCE1P3-201ENST00000553649 EFCAB5A4FU69 1503 aa9.71□□□□□ -0.86
SMARCE1P3-201ENST00000553649 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1P3-201ENST00000553649 PDE4AP27815 886 aa9.7□□□□□ -0.86
SMARCE1P3-201ENST00000553649 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
SMARCE1P3-201ENST00000553649 GOLGA3Q08378 1498 aa9.7□□□□□ -0.86
SMARCE1P3-201ENST00000553649 EMILIN3Q9NT22 766 aa9.69□□□□□ -0.86
SMARCE1P3-201ENST00000553649 BCAMP50895 628 aa9.68□□□□□ -0.86
SMARCE1P3-201ENST00000553649 RABGEF1Q9UJ41 708 aa9.68□□□□□ -0.86
SMARCE1P3-201ENST00000553649 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
SMARCE1P3-201ENST00000553649 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
SMARCE1P3-201ENST00000553649 TOM1O60784 492 aa9.66□□□□□ -0.86
SMARCE1P3-201ENST00000553649 POTEAQ6S8J7 498 aa9.66□□□□□ -0.86
SMARCE1P3-201ENST00000553649 HECW1Q76N89 1606 aa9.66□□□□□ -0.86
SMARCE1P3-201ENST00000553649 ATP10AO60312 1499 aa9.66□□□□□ -0.86
SMARCE1P3-201ENST00000553649 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
SMARCE1P3-201ENST00000553649 CAMSAP1Q5T5Y3 1602 aa9.65□□□□□ -0.86
SMARCE1P3-201ENST00000553649 ALKQ9UM73 1620 aa9.65□□□□□ -0.86
SMARCE1P3-201ENST00000553649 C9orf84Q5VXU9 1444 aa9.65□□□□□ -0.87
SMARCE1P3-201ENST00000553649 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1P3-201ENST00000553649 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
SMARCE1P3-201ENST00000553649 MFSD10Q14728 455 aa9.64□□□□□ -0.87
SMARCE1P3-201ENST00000553649 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
SMARCE1P3-201ENST00000553649 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
SMARCE1P3-201ENST00000553649 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
SMARCE1P3-201ENST00000553649 RYDENQ9NUL5 291 aaKnown RBP9.62□□□□□ -0.87
SMARCE1P3-201ENST00000553649 LCE2BO14633 110 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms