RNA–Protein interactions for RNA: ENST00000553460.5

TMEM55B-203, humanhuman

TSL 5

Gene TMEM55B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-203ENST00000553460 KCNA6P17658 529 aa24.79■■□□□ 1.56
TMEM55B-203ENST00000553460 SLC26A8Q96RN1 970 aa24.79■■□□□ 1.56
TMEM55B-203ENST00000553460 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
TMEM55B-203ENST00000553460 BCANQ96GW7 911 aa24.78■■□□□ 1.56
TMEM55B-203ENST00000553460 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
TMEM55B-203ENST00000553460 NKTRP30414 1462 aaKnown RBP24.77■■□□□ 1.56
TMEM55B-203ENST00000553460 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
TMEM55B-203ENST00000553460 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
TMEM55B-203ENST00000553460 PLEKHG1Q9ULL1 1385 aa24.77■■□□□ 1.56
TMEM55B-203ENST00000553460 PPP1R15AO75807 674 aaPredicted RBP24.76■■□□□ 1.55
TMEM55B-203ENST00000553460 NUP155O75694 1391 aa24.76■■□□□ 1.55
TMEM55B-203ENST00000553460 TMEM94Q12767 1356 aa24.76■■□□□ 1.55
TMEM55B-203ENST00000553460 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
TMEM55B-203ENST00000553460 PROSER2Q86WR7 435 aaPredicted RBP24.72■■□□□ 1.55
TMEM55B-203ENST00000553460 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
TMEM55B-203ENST00000553460 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
TMEM55B-203ENST00000553460 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
TMEM55B-203ENST00000553460 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
TMEM55B-203ENST00000553460 FAM135BQ49AJ0 1406 aa24.67■■□□□ 1.54
TMEM55B-203ENST00000553460 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
TMEM55B-203ENST00000553460 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
TMEM55B-203ENST00000553460 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
TMEM55B-203ENST00000553460 MSH6P52701 1360 aa24.65■■□□□ 1.54
TMEM55B-203ENST00000553460 TBX22Q9Y458 520 aa24.64■■□□□ 1.54
TMEM55B-203ENST00000553460 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
TMEM55B-203ENST00000553460 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
TMEM55B-203ENST00000553460 ADAMTS13Q76LX8 1427 aa24.61■■□□□ 1.53
TMEM55B-203ENST00000553460 PIK3R4Q99570 1358 aa24.6■■□□□ 1.53
TMEM55B-203ENST00000553460 NUTM2DQ5VT03 806 aaPredicted RBP24.6■■□□□ 1.53
TMEM55B-203ENST00000553460 TRPM2O94759 1503 aa24.58■■□□□ 1.53
TMEM55B-203ENST00000553460 NCOA3Q9Y6Q9 1424 aa24.58■■□□□ 1.53
TMEM55B-203ENST00000553460 NAIPQ13075 1403 aa24.57■■□□□ 1.52
TMEM55B-203ENST00000553460 SETBP1Q9Y6X0 1596 aa24.52■■□□□ 1.52
TMEM55B-203ENST00000553460 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
TMEM55B-203ENST00000553460 SLAIN2Q9P270 581 aa24.52■■□□□ 1.52
TMEM55B-203ENST00000553460 CLTCL1P53675 1640 aa24.52■■□□□ 1.52
TMEM55B-203ENST00000553460 ZNF326Q5BKZ1 582 aaKnown RBP24.51■■□□□ 1.51
TMEM55B-203ENST00000553460 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
TMEM55B-203ENST00000553460 NRXN3Q9Y4C0 1643 aa24.5■■□□□ 1.51
TMEM55B-203ENST00000553460 PHLPP1O60346 1717 aa24.49■■□□□ 1.51
TMEM55B-203ENST00000553460 KIF1BO60333 1816 aa24.47■■□□□ 1.51
TMEM55B-203ENST00000553460 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.47■■□□□ 1.51
TMEM55B-203ENST00000553460 PTPRUQ92729 1446 aa24.46■■□□□ 1.51
TMEM55B-203ENST00000553460 AMOTL2Q9Y2J4 779 aa24.46■■□□□ 1.51
TMEM55B-203ENST00000553460 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
TMEM55B-203ENST00000553460 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.51
TMEM55B-203ENST00000553460 CADPS2Q86UW7 1296 aa24.44■■□□□ 1.5
TMEM55B-203ENST00000553460 TRIM52Q96A61 297 aa24.44■■□□□ 1.5
TMEM55B-203ENST00000553460 C19orf44Q9H6X5 657 aa24.44■■□□□ 1.5
TMEM55B-203ENST00000553460 ATF3P18847 181 aa24.43■■□□□ 1.5
TMEM55B-203ENST00000553460 DCCP43146 1447 aa24.41■■□□□ 1.5
TMEM55B-203ENST00000553460 COL16A1Q07092 1604 aaPredicted RBP24.4■■□□□ 1.5
TMEM55B-203ENST00000553460 JCADQ9P266 1359 aa24.4■■□□□ 1.5
TMEM55B-203ENST00000553460 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
TMEM55B-203ENST00000553460 METP08581 1390 aa24.38■■□□□ 1.49
TMEM55B-203ENST00000553460 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
TMEM55B-203ENST00000553460 RGS17Q9UGC6 210 aaPredicted RBP24.37■■□□□ 1.49
TMEM55B-203ENST00000553460 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
TMEM55B-203ENST00000553460 RPGRIP1LQ68CZ1 1315 aa24.31■■□□□ 1.48
TMEM55B-203ENST00000553460 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
TMEM55B-203ENST00000553460 BRINP3Q76B58 766 aa24.29■■□□□ 1.48
TMEM55B-203ENST00000553460 SHPRHQ149N8 1683 aa24.29■■□□□ 1.48
TMEM55B-203ENST00000553460 SETD1AO15047 1707 aaKnown RBP24.29■■□□□ 1.48
TMEM55B-203ENST00000553460 ASXL1Q8IXJ9 1541 aa24.29■■□□□ 1.48
TMEM55B-203ENST00000553460 SPATA31A6Q5VVP1 1343 aa24.29■■□□□ 1.48
TMEM55B-203ENST00000553460 PPLO60437 1756 aa24.29■■□□□ 1.48
TMEM55B-203ENST00000553460 MST1RQ04912 1400 aa24.28■■□□□ 1.48
TMEM55B-203ENST00000553460 NALCNQ8IZF0 1738 aa24.28■■□□□ 1.48
TMEM55B-203ENST00000553460 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
TMEM55B-203ENST00000553460 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
TMEM55B-203ENST00000553460 NHSL1Q5SYE7 1610 aa24.24■■□□□ 1.47
TMEM55B-203ENST00000553460 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
TMEM55B-203ENST00000553460 PRAG1Q86YV5 1406 aa24.23■■□□□ 1.47
TMEM55B-203ENST00000553460 LRP6O75581 1613 aa24.23■■□□□ 1.47
TMEM55B-203ENST00000553460 FOXD1Q16676 465 aa24.21■■□□□ 1.47
TMEM55B-203ENST00000553460 MEX3CQ5U5Q3 659 aaKnown RBP24.21■■□□□ 1.47
TMEM55B-203ENST00000553460 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
TMEM55B-203ENST00000553460 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
TMEM55B-203ENST00000553460 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
TMEM55B-203ENST00000553460 MPHOSPH9Q99550 1183 aa24.18■■□□□ 1.46
TMEM55B-203ENST00000553460 C1orf167Q5SNV9 1468 aa24.15■■□□□ 1.46
TMEM55B-203ENST00000553460 SPATA31E1Q6ZUB1 1445 aa24.15■■□□□ 1.46
TMEM55B-203ENST00000553460 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
TMEM55B-203ENST00000553460 ANKRD30BQ9BXX2 1392 aa24.14■■□□□ 1.45
TMEM55B-203ENST00000553460 ZNF772Q68DY9 489 aaPredicted RBP24.13■■□□□ 1.45
TMEM55B-203ENST00000553460 LRRC59Q96AG4 307 aaKnown RBP24.13■■□□□ 1.45
TMEM55B-203ENST00000553460 LAMC1P11047 1609 aa24.11■■□□□ 1.45
TMEM55B-203ENST00000553460 RGL3Q3MIN7 710 aa24.11■■□□□ 1.45
TMEM55B-203ENST00000553460 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
TMEM55B-203ENST00000553460 NUTM2BA6NNL0 878 aaPredicted RBP24.1■■□□□ 1.45
TMEM55B-203ENST00000553460 NUTM2EB1AL46 878 aaPredicted RBP24.1■■□□□ 1.45
TMEM55B-203ENST00000553460 NUTM2AQ8IVF1 878 aaPredicted RBP24.1■■□□□ 1.45
TMEM55B-203ENST00000553460 CDC42BPGQ6DT37 1551 aa24.09■■□□□ 1.45
TMEM55B-203ENST00000553460 DDX17Q92841 729 aaKnown RBP24.08■■□□□ 1.45
TMEM55B-203ENST00000553460 PNPLA6Q8IY17 1366 aa24.07■■□□□ 1.44
TMEM55B-203ENST00000553460 TECPR2O15040 1411 aa24.06■■□□□ 1.44
TMEM55B-203ENST00000553460 PIK3C2GO75747 1445 aa24.06■■□□□ 1.44
TMEM55B-203ENST00000553460 KNDC1Q76NI1 1749 aa24.06■■□□□ 1.44
TMEM55B-203ENST00000553460 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
TMEM55B-203ENST00000553460 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms