RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 HRCP23327 699 aa12.33□□□□□ -0.44
PCNX1-204ENST00000553428 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
PCNX1-204ENST00000553428 PPP1R15AO75807 674 aaPredicted RBP12.32□□□□□ -0.44
PCNX1-204ENST00000553428 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
PCNX1-204ENST00000553428 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
PCNX1-204ENST00000553428 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
PCNX1-204ENST00000553428 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
PCNX1-204ENST00000553428 KCNA6P17658 529 aa12.28□□□□□ -0.44
PCNX1-204ENST00000553428 BCANQ96GW7 911 aa12.28□□□□□ -0.44
PCNX1-204ENST00000553428 RPGRIP1LQ68CZ1 1315 aa12.28□□□□□ -0.44
PCNX1-204ENST00000553428 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
PCNX1-204ENST00000553428 SLC26A8Q96RN1 970 aa12.27□□□□□ -0.45
PCNX1-204ENST00000553428 PIK3R4Q99570 1358 aa12.26□□□□□ -0.45
PCNX1-204ENST00000553428 CCDC144AA2RUR9 1427 aa12.26□□□□□ -0.45
PCNX1-204ENST00000553428 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
PCNX1-204ENST00000553428 TOM1O60784 492 aa12.25□□□□□ -0.45
PCNX1-204ENST00000553428 LRRC7Q96NW7 1537 aa12.25□□□□□ -0.45
PCNX1-204ENST00000553428 DIP2AQ14689 1571 aa12.25□□□□□ -0.45
PCNX1-204ENST00000553428 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
PCNX1-204ENST00000553428 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
PCNX1-204ENST00000553428 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
PCNX1-204ENST00000553428 ADAMTS13Q76LX8 1427 aa12.24□□□□□ -0.45
PCNX1-204ENST00000553428 FOXD1Q16676 465 aa12.23□□□□□ -0.45
PCNX1-204ENST00000553428 NUTM2DQ5VT03 806 aaPredicted RBP12.23□□□□□ -0.45
PCNX1-204ENST00000553428 MYO5BQ9ULV0 1848 aa12.23□□□□□ -0.45
PCNX1-204ENST00000553428 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
PCNX1-204ENST00000553428 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.45
PCNX1-204ENST00000553428 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
PCNX1-204ENST00000553428 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
PCNX1-204ENST00000553428 NCOA3Q9Y6Q9 1424 aa12.2□□□□□ -0.46
PCNX1-204ENST00000553428 KIF1BO60333 1816 aa12.2□□□□□ -0.46
PCNX1-204ENST00000553428 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
PCNX1-204ENST00000553428 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
PCNX1-204ENST00000553428 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
PCNX1-204ENST00000553428 STRCP1A6NGW2 1772 aa12.19□□□□□ -0.46
PCNX1-204ENST00000553428 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
PCNX1-204ENST00000553428 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
PCNX1-204ENST00000553428 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
PCNX1-204ENST00000553428 MSH6P52701 1360 aa12.16□□□□□ -0.46
PCNX1-204ENST00000553428 NRXN3Q9Y4C0 1643 aa12.15□□□□□ -0.46
PCNX1-204ENST00000553428 METP08581 1390 aa12.15□□□□□ -0.46
PCNX1-204ENST00000553428 CHD2O14647 1828 aaKnown RBP12.14□□□□□ -0.47
PCNX1-204ENST00000553428 PTPRUQ92729 1446 aa12.14□□□□□ -0.47
PCNX1-204ENST00000553428 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
PCNX1-204ENST00000553428 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
PCNX1-204ENST00000553428 ADGRF5Q8IZF2 1346 aa12.12□□□□□ -0.47
PCNX1-204ENST00000553428 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
PCNX1-204ENST00000553428 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
PCNX1-204ENST00000553428 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
PCNX1-204ENST00000553428 C19orf44Q9H6X5 657 aa12.12□□□□□ -0.47
PCNX1-204ENST00000553428 PPLO60437 1756 aa12.12□□□□□ -0.47
PCNX1-204ENST00000553428 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
PCNX1-204ENST00000553428 MYOM2P54296 1465 aa12.11□□□□□ -0.47
PCNX1-204ENST00000553428 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
PCNX1-204ENST00000553428 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
PCNX1-204ENST00000553428 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
PCNX1-204ENST00000553428 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
PCNX1-204ENST00000553428 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
PCNX1-204ENST00000553428 XRN1Q8IZH2 1706 aaKnown RBP12.1□□□□□ -0.47
PCNX1-204ENST00000553428 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
PCNX1-204ENST00000553428 DCCP43146 1447 aa12.1□□□□□ -0.47
PCNX1-204ENST00000553428 XIRP1Q702N8 1843 aaKnown RBP12.09□□□□□ -0.47
PCNX1-204ENST00000553428 NRXN1Q9ULB1 1477 aa12.09□□□□□ -0.47
PCNX1-204ENST00000553428 ATF3P18847 181 aa12.08□□□□□ -0.48
PCNX1-204ENST00000553428 HSPA1LP34931 641 aa12.08□□□□□ -0.48
PCNX1-204ENST00000553428 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
PCNX1-204ENST00000553428 SLAIN2Q9P270 581 aa12.08□□□□□ -0.48
PCNX1-204ENST00000553428 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
PCNX1-204ENST00000553428 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
PCNX1-204ENST00000553428 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
PCNX1-204ENST00000553428 TECPR2O15040 1411 aa12.06□□□□□ -0.48
PCNX1-204ENST00000553428 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
PCNX1-204ENST00000553428 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
PCNX1-204ENST00000553428 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
PCNX1-204ENST00000553428 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
PCNX1-204ENST00000553428 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
PCNX1-204ENST00000553428 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
PCNX1-204ENST00000553428 LAMC1P11047 1609 aa12.03□□□□□ -0.48
PCNX1-204ENST00000553428 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
PCNX1-204ENST00000553428 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
PCNX1-204ENST00000553428 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
PCNX1-204ENST00000553428 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.02□□□□□ -0.49
PCNX1-204ENST00000553428 TMEM132EQ6IEE7 984 aa12.01□□□□□ -0.49
PCNX1-204ENST00000553428 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
PCNX1-204ENST00000553428 STK26Q9P289 416 aa12□□□□□ -0.49
PCNX1-204ENST00000553428 MST1RQ04912 1400 aa12□□□□□ -0.49
PCNX1-204ENST00000553428 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
PCNX1-204ENST00000553428 BRINP3Q76B58 766 aa11.99□□□□□ -0.49
PCNX1-204ENST00000553428 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
PCNX1-204ENST00000553428 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
PCNX1-204ENST00000553428 DLC1Q96QB1 1528 aa11.97□□□□□ -0.49
PCNX1-204ENST00000553428 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
PCNX1-204ENST00000553428 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.49
PCNX1-204ENST00000553428 C1orf167Q5SNV9 1468 aa11.96□□□□□ -0.49
PCNX1-204ENST00000553428 NALCNQ8IZF0 1738 aa11.96□□□□□ -0.49
PCNX1-204ENST00000553428 AHDC1Q5TGY3 1603 aaPredicted RBP11.96□□□□□ -0.5
PCNX1-204ENST00000553428 JCADQ9P266 1359 aa11.95□□□□□ -0.5
PCNX1-204ENST00000553428 DISP3Q9P2K9 1392 aa11.95□□□□□ -0.5
PCNX1-204ENST00000553428 PLEKHH1Q9ULM0 1364 aa11.94□□□□□ -0.5
PCNX1-204ENST00000553428 L3MBTL2Q969R5 705 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms