RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 SPATA31E1Q6ZUB1 1445 aa15.09■□□□□ 0.01
CALCOCO1-222ENST00000553154 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
CALCOCO1-222ENST00000553154 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
CALCOCO1-222ENST00000553154 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
CALCOCO1-222ENST00000553154 PLEKHG1Q9ULL1 1385 aa15.06■□□□□ 0
CALCOCO1-222ENST00000553154 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ -0
CALCOCO1-222ENST00000553154 TXNDC2Q86VQ3 553 aa15.05■□□□□ -0
CALCOCO1-222ENST00000553154 ADAMTS13Q76LX8 1427 aa15.04■□□□□ -0
CALCOCO1-222ENST00000553154 NRXN3Q9Y4C0 1643 aa15.03■□□□□ -0
CALCOCO1-222ENST00000553154 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
CALCOCO1-222ENST00000553154 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
CALCOCO1-222ENST00000553154 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
CALCOCO1-222ENST00000553154 SETBP1Q9Y6X0 1596 aa15.02■□□□□ -0
CALCOCO1-222ENST00000553154 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
CALCOCO1-222ENST00000553154 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
CALCOCO1-222ENST00000553154 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
CALCOCO1-222ENST00000553154 KIF1BO60333 1816 aa15□□□□□ -0.01
CALCOCO1-222ENST00000553154 IQSEC2Q5JU85 1478 aa15□□□□□ -0.01
CALCOCO1-222ENST00000553154 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
CALCOCO1-222ENST00000553154 CPS1P31327 1500 aa14.99□□□□□ -0.01
CALCOCO1-222ENST00000553154 IFT172Q9UG01 1749 aa14.99□□□□□ -0.01
CALCOCO1-222ENST00000553154 CHGAP10645 457 aaKnown RBP14.98□□□□□ -0.01
CALCOCO1-222ENST00000553154 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
CALCOCO1-222ENST00000553154 PPLO60437 1756 aa14.98□□□□□ -0.01
CALCOCO1-222ENST00000553154 RPGRIP1LQ68CZ1 1315 aa14.96□□□□□ -0.01
CALCOCO1-222ENST00000553154 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
CALCOCO1-222ENST00000553154 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.02
CALCOCO1-222ENST00000553154 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
CALCOCO1-222ENST00000553154 LRRC7Q96NW7 1537 aa14.95□□□□□ -0.02
CALCOCO1-222ENST00000553154 MYOM2P54296 1465 aa14.95□□□□□ -0.02
CALCOCO1-222ENST00000553154 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
CALCOCO1-222ENST00000553154 TBX22Q9Y458 520 aa14.94□□□□□ -0.02
CALCOCO1-222ENST00000553154 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
CALCOCO1-222ENST00000553154 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
CALCOCO1-222ENST00000553154 NUTM2DQ5VT03 806 aaPredicted RBP14.93□□□□□ -0.02
CALCOCO1-222ENST00000553154 SLC26A8Q96RN1 970 aa14.93□□□□□ -0.02
CALCOCO1-222ENST00000553154 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
CALCOCO1-222ENST00000553154 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
CALCOCO1-222ENST00000553154 ALKQ9UM73 1620 aa14.92□□□□□ -0.02
CALCOCO1-222ENST00000553154 XRN1Q8IZH2 1706 aaKnown RBP14.92□□□□□ -0.02
CALCOCO1-222ENST00000553154 PIK3C2GO75747 1445 aa14.92□□□□□ -0.02
CALCOCO1-222ENST00000553154 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
CALCOCO1-222ENST00000553154 METP08581 1390 aa14.9□□□□□ -0.02
CALCOCO1-222ENST00000553154 KCNA6P17658 529 aa14.9□□□□□ -0.02
CALCOCO1-222ENST00000553154 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-222ENST00000553154 ASXL1Q8IXJ9 1541 aa14.9□□□□□ -0.02
CALCOCO1-222ENST00000553154 ADGRF5Q8IZF2 1346 aa14.9□□□□□ -0.02
CALCOCO1-222ENST00000553154 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-222ENST00000553154 XIRP1Q702N8 1843 aaKnown RBP14.88□□□□□ -0.03
CALCOCO1-222ENST00000553154 VGFO15240 615 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-222ENST00000553154 RGL3Q3MIN7 710 aa14.85□□□□□ -0.03
CALCOCO1-222ENST00000553154 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
CALCOCO1-222ENST00000553154 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
CALCOCO1-222ENST00000553154 TECPR2O15040 1411 aa14.83□□□□□ -0.03
CALCOCO1-222ENST00000553154 ADGRB1O14514 1584 aa14.83□□□□□ -0.04
CALCOCO1-222ENST00000553154 PTCH1Q13635 1447 aa14.83□□□□□ -0.04
CALCOCO1-222ENST00000553154 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.04
CALCOCO1-222ENST00000553154 LAMC1P11047 1609 aa14.82□□□□□ -0.04
CALCOCO1-222ENST00000553154 BCANQ96GW7 911 aa14.8□□□□□ -0.04
CALCOCO1-222ENST00000553154 C14orf93Q9H972 538 aaKnown RBP14.8□□□□□ -0.04
CALCOCO1-222ENST00000553154 AMOTL2Q9Y2J4 779 aa14.8□□□□□ -0.04
CALCOCO1-222ENST00000553154 STAC3Q96MF2 364 aa14.79□□□□□ -0.04
CALCOCO1-222ENST00000553154 ROBO2Q9HCK4 1378 aa14.79□□□□□ -0.04
CALCOCO1-222ENST00000553154 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
CALCOCO1-222ENST00000553154 LRPPRCP42704 1394 aaKnown RBP14.78□□□□□ -0.04
CALCOCO1-222ENST00000553154 SIN3AQ96ST3 1273 aa14.78□□□□□ -0.04
CALCOCO1-222ENST00000553154 PCGF6Q9BYE7 350 aa14.78□□□□□ -0.04
CALCOCO1-222ENST00000553154 ABCC11Q96J66 1382 aa14.76□□□□□ -0.05
CALCOCO1-222ENST00000553154 UBAP1LF5GYI3 381 aa14.76□□□□□ -0.05
CALCOCO1-222ENST00000553154 PROSER2Q86WR7 435 aaPredicted RBP14.76□□□□□ -0.05
CALCOCO1-222ENST00000553154 YTHDC2Q9H6S0 1430 aaKnown RBP14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 CFAP70Q5T0N1 1121 aa14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 DCAF11Q8TEB1 546 aa14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 MED1Q15648 1581 aaPredicted RBP14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 DCCP43146 1447 aa14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 ADGRL3Q9HAR2 1447 aa14.75□□□□□ -0.05
CALCOCO1-222ENST00000553154 DLC1Q96QB1 1528 aa14.74□□□□□ -0.05
CALCOCO1-222ENST00000553154 NALCNQ8IZF0 1738 aa14.74□□□□□ -0.05
CALCOCO1-222ENST00000553154 KIAA1210Q9ULL0 1709 aa14.73□□□□□ -0.05
CALCOCO1-222ENST00000553154 L3MBTL2Q969R5 705 aa14.73□□□□□ -0.05
CALCOCO1-222ENST00000553154 FAM135BQ49AJ0 1406 aa14.73□□□□□ -0.05
CALCOCO1-222ENST00000553154 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
CALCOCO1-222ENST00000553154 TMEM132EQ6IEE7 984 aa14.71□□□□□ -0.05
CALCOCO1-222ENST00000553154 MSH6P52701 1360 aa14.71□□□□□ -0.06
CALCOCO1-222ENST00000553154 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
CALCOCO1-222ENST00000553154 PLEKHH1Q9ULM0 1364 aa14.7□□□□□ -0.06
CALCOCO1-222ENST00000553154 CDC42BPGQ6DT37 1551 aa14.69□□□□□ -0.06
CALCOCO1-222ENST00000553154 TOM1O60784 492 aa14.69□□□□□ -0.06
CALCOCO1-222ENST00000553154 KDM2AQ9Y2K7 1162 aa14.69□□□□□ -0.06
CALCOCO1-222ENST00000553154 CLSPNQ9HAW4 1339 aa14.68□□□□□ -0.06
CALCOCO1-222ENST00000553154 MST1RQ04912 1400 aa14.68□□□□□ -0.06
CALCOCO1-222ENST00000553154 HSPA1LP34931 641 aa14.68□□□□□ -0.06
CALCOCO1-222ENST00000553154 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
CALCOCO1-222ENST00000553154 TRPM1Q7Z4N2 1603 aa14.67□□□□□ -0.06
CALCOCO1-222ENST00000553154 ADGRB2O60241 1585 aa14.67□□□□□ -0.06
CALCOCO1-222ENST00000553154 GPRASP1Q5JY77 1395 aa14.65□□□□□ -0.06
CALCOCO1-222ENST00000553154 NEUROD1Q13562 356 aa14.65□□□□□ -0.06
CALCOCO1-222ENST00000553154 ARHGEF28Q8N1W1 1705 aaKnown RBP14.65□□□□□ -0.06
CALCOCO1-222ENST00000553154 NBPF8Q3BBV2 869 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms