RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 RIMS2Q9UQ26 1411 aa27.35■■□□□ 1.97
DDX54-209ENST00000551912 ZFYVE9O95405 1425 aa27.34■■□□□ 1.97
DDX54-209ENST00000551912 MED14O60244 1454 aa27.34■■□□□ 1.97
DDX54-209ENST00000551912 NPHP4O75161 1426 aaPredicted RBP27.33■■□□□ 1.96
DDX54-209ENST00000551912 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.32■■□□□ 1.96
DDX54-209ENST00000551912 DHX57Q6P158 1386 aaKnown RBP27.31■■□□□ 1.96
DDX54-209ENST00000551912 PPP1R15AO75807 674 aaPredicted RBP27.3■■□□□ 1.96
DDX54-209ENST00000551912 SPATA31E1Q6ZUB1 1445 aa27.28■■□□□ 1.96
DDX54-209ENST00000551912 IQGAP1P46940 1657 aa27.27■■□□□ 1.96
DDX54-209ENST00000551912 RPGRIP1LQ68CZ1 1315 aa27.26■■□□□ 1.95
DDX54-209ENST00000551912 NUTM2DQ5VT03 806 aaPredicted RBP27.26■■□□□ 1.95
DDX54-209ENST00000551912 RGL3Q3MIN7 710 aa27.25■■□□□ 1.95
DDX54-209ENST00000551912 NEXMIFQ5QGS0 1516 aa27.25■■□□□ 1.95
DDX54-209ENST00000551912 PLEKHG1Q9ULL1 1385 aa27.23■■□□□ 1.95
DDX54-209ENST00000551912 BCANQ96GW7 911 aa27.22■■□□□ 1.95
DDX54-209ENST00000551912 VGFO15240 615 aaPredicted RBP27.19■■□□□ 1.94
DDX54-209ENST00000551912 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
DDX54-209ENST00000551912 PPLO60437 1756 aa27.17■■□□□ 1.94
DDX54-209ENST00000551912 SLC26A8Q96RN1 970 aa27.15■■□□□ 1.94
DDX54-209ENST00000551912 ZNF335Q9H4Z2 1342 aaPredicted RBP27.13■■□□□ 1.93
DDX54-209ENST00000551912 IFT172Q9UG01 1749 aa27.12■■□□□ 1.93
DDX54-209ENST00000551912 SIN3AQ96ST3 1273 aa27.11■■□□□ 1.93
DDX54-209ENST00000551912 SETBP1Q9Y6X0 1596 aa27.1■■□□□ 1.93
DDX54-209ENST00000551912 ADAMTS13Q76LX8 1427 aa27.1■■□□□ 1.93
DDX54-209ENST00000551912 TBX22Q9Y458 520 aa27.1■■□□□ 1.93
DDX54-209ENST00000551912 DIP2AQ14689 1571 aa27.09■■□□□ 1.93
DDX54-209ENST00000551912 ADGRF5Q8IZF2 1346 aa27.08■■□□□ 1.93
DDX54-209ENST00000551912 NEUROD1Q13562 356 aa27.07■■□□□ 1.92
DDX54-209ENST00000551912 NRXN3Q9Y4C0 1643 aa27.07■■□□□ 1.92
DDX54-209ENST00000551912 MYOM2P54296 1465 aa27.06■■□□□ 1.92
DDX54-209ENST00000551912 DCAF11Q8TEB1 546 aa27.05■■□□□ 1.92
DDX54-209ENST00000551912 LTBP4Q8N2S1 1624 aa27.05■■□□□ 1.92
DDX54-209ENST00000551912 STAC3Q96MF2 364 aa27.03■■□□□ 1.92
DDX54-209ENST00000551912 KDM2AQ9Y2K7 1162 aa27.02■■□□□ 1.92
DDX54-209ENST00000551912 KCNA6P17658 529 aa27.01■■□□□ 1.91
DDX54-209ENST00000551912 CPS1P31327 1500 aa27■■□□□ 1.91
DDX54-209ENST00000551912 NRXN1Q9ULB1 1477 aa27■■□□□ 1.91
DDX54-209ENST00000551912 PIK3C2GO75747 1445 aa27■■□□□ 1.91
DDX54-209ENST00000551912 PIK3R4Q99570 1358 aa27■■□□□ 1.91
DDX54-209ENST00000551912 ALKQ9UM73 1620 aa26.99■■□□□ 1.91
DDX54-209ENST00000551912 STRCP1A6NGW2 1772 aa26.98■■□□□ 1.91
DDX54-209ENST00000551912 CLSPNQ9HAW4 1339 aa26.97■■□□□ 1.91
DDX54-209ENST00000551912 METP08581 1390 aa26.97■■□□□ 1.91
DDX54-209ENST00000551912 CERKQ8TCT0 537 aa26.96■■□□□ 1.91
DDX54-209ENST00000551912 NWD1Q149M9 1564 aa26.96■■□□□ 1.91
DDX54-209ENST00000551912 CHD2O14647 1828 aaKnown RBP26.95■■□□□ 1.91
DDX54-209ENST00000551912 CCER1Q8TC90 406 aaPredicted RBP26.95■■□□□ 1.9
DDX54-209ENST00000551912 L3MBTL2Q969R5 705 aa26.95■■□□□ 1.9
DDX54-209ENST00000551912 SETD1AO15047 1707 aaKnown RBP26.94■■□□□ 1.9
DDX54-209ENST00000551912 PTPRUQ92729 1446 aa26.92■■□□□ 1.9
DDX54-209ENST00000551912 AMOTL2Q9Y2J4 779 aa26.92■■□□□ 1.9
DDX54-209ENST00000551912 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
DDX54-209ENST00000551912 C14orf93Q9H972 538 aaKnown RBP26.91■■□□□ 1.9
DDX54-209ENST00000551912 TONSLQ96HA7 1378 aa26.91■■□□□ 1.9
DDX54-209ENST00000551912 CFAP70Q5T0N1 1121 aa26.89■■□□□ 1.9
DDX54-209ENST00000551912 LAMC1P11047 1609 aa26.89■■□□□ 1.9
DDX54-209ENST00000551912 LRRC7Q96NW7 1537 aa26.89■■□□□ 1.89
DDX54-209ENST00000551912 PROSER2Q86WR7 435 aaPredicted RBP26.87■■□□□ 1.89
DDX54-209ENST00000551912 IQSEC2Q5JU85 1478 aa26.87■■□□□ 1.89
DDX54-209ENST00000551912 XRN1Q8IZH2 1706 aaKnown RBP26.86■■□□□ 1.89
DDX54-209ENST00000551912 PRAG1Q86YV5 1406 aa26.85■■□□□ 1.89
DDX54-209ENST00000551912 TMEM132EQ6IEE7 984 aa26.84■■□□□ 1.89
DDX54-209ENST00000551912 ASXL1Q8IXJ9 1541 aa26.83■■□□□ 1.89
DDX54-209ENST00000551912 TMEM94Q12767 1356 aa26.83■■□□□ 1.88
DDX54-209ENST00000551912 RBM33Q96EV2 1170 aaKnown RBP26.8■■□□□ 1.88
DDX54-209ENST00000551912 LRPPRCP42704 1394 aaKnown RBP26.8■■□□□ 1.88
DDX54-209ENST00000551912 STK26Q9P289 416 aa26.79■■□□□ 1.88
DDX54-209ENST00000551912 YTHDC2Q9H6S0 1430 aaKnown RBP26.79■■□□□ 1.88
DDX54-209ENST00000551912 PTCH1Q13635 1447 aa26.78■■□□□ 1.88
DDX54-209ENST00000551912 KIAA1210Q9ULL0 1709 aa26.77■■□□□ 1.88
DDX54-209ENST00000551912 ADGRB1O14514 1584 aa26.77■■□□□ 1.88
DDX54-209ENST00000551912 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
DDX54-209ENST00000551912 XIRP1Q702N8 1843 aaKnown RBP26.76■■□□□ 1.88
DDX54-209ENST00000551912 NCOA3Q9Y6Q9 1424 aa26.76■■□□□ 1.87
DDX54-209ENST00000551912 TIMELESSQ9UNS1 1208 aa26.76■■□□□ 1.87
DDX54-209ENST00000551912 TECPR2O15040 1411 aa26.75■■□□□ 1.87
DDX54-209ENST00000551912 ROBO2Q9HCK4 1378 aa26.75■■□□□ 1.87
DDX54-209ENST00000551912 C14orf37Q86TY3 774 aa26.74■■□□□ 1.87
DDX54-209ENST00000551912 KNDC1Q76NI1 1749 aa26.73■■□□□ 1.87
DDX54-209ENST00000551912 NBPF1Q3BBV0 1214 aa26.71■■□□□ 1.87
DDX54-209ENST00000551912 NBPF8Q3BBV2 869 aa26.71■■□□□ 1.87
DDX54-209ENST00000551912 MSH6P52701 1360 aa26.71■■□□□ 1.87
DDX54-209ENST00000551912 UBAP1LF5GYI3 381 aa26.69■■□□□ 1.86
DDX54-209ENST00000551912 SIRT1Q96EB6 747 aa26.69■■□□□ 1.86
DDX54-209ENST00000551912 TOM1O60784 492 aa26.68■■□□□ 1.86
DDX54-209ENST00000551912 TRAK1Q9UPV9 953 aa26.68■■□□□ 1.86
DDX54-209ENST00000551912 TRPM1Q7Z4N2 1603 aa26.68■■□□□ 1.86
DDX54-209ENST00000551912 FAM135BQ49AJ0 1406 aa26.67■■□□□ 1.86
DDX54-209ENST00000551912 C19orf44Q9H6X5 657 aa26.67■■□□□ 1.86
DDX54-209ENST00000551912 DLC1Q96QB1 1528 aa26.66■■□□□ 1.86
DDX54-209ENST00000551912 WAPLQ7Z5K2 1190 aa26.66■■□□□ 1.86
DDX54-209ENST00000551912 FBXO41Q8TF61 875 aa26.66■■□□□ 1.86
DDX54-209ENST00000551912 ROCK2O75116 1388 aaKnown RBP26.65■■□□□ 1.86
DDX54-209ENST00000551912 ADGRL3Q9HAR2 1447 aa26.65■■□□□ 1.86
DDX54-209ENST00000551912 PLEKHH1Q9ULM0 1364 aa26.63■■□□□ 1.85
DDX54-209ENST00000551912 PRAM1Q96QH2 718 aa26.63■■□□□ 1.85
DDX54-209ENST00000551912 POGKQ9P215 609 aa26.62■■□□□ 1.85
DDX54-209ENST00000551912 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.62■■□□□ 1.85
DDX54-209ENST00000551912 ATF3P18847 181 aa26.61■■□□□ 1.85
DDX54-209ENST00000551912 NALCNQ8IZF0 1738 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 596.7 ms