RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 ZFYVE9O95405 1425 aa24.97■■□□□ 1.59
BRF1-219ENST00000551787 CPS1P31327 1500 aa24.96■■□□□ 1.59
BRF1-219ENST00000551787 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
BRF1-219ENST00000551787 MYO5BQ9ULV0 1848 aa24.96■■□□□ 1.59
BRF1-219ENST00000551787 ZNF326Q5BKZ1 582 aaKnown RBP24.95■■□□□ 1.58
BRF1-219ENST00000551787 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
BRF1-219ENST00000551787 MPHOSPH9Q99550 1183 aa24.94■■□□□ 1.58
BRF1-219ENST00000551787 SETD5Q9C0A6 1442 aa24.93■■□□□ 1.58
BRF1-219ENST00000551787 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
BRF1-219ENST00000551787 STRCP1A6NGW2 1772 aa24.91■■□□□ 1.58
BRF1-219ENST00000551787 PLEKHG1Q9ULL1 1385 aa24.91■■□□□ 1.58
BRF1-219ENST00000551787 KCNA6P17658 529 aa24.89■■□□□ 1.58
BRF1-219ENST00000551787 PIP4K2BP78356 416 aa24.89■■□□□ 1.58
BRF1-219ENST00000551787 RBM33Q96EV2 1170 aaKnown RBP24.89■■□□□ 1.58
BRF1-219ENST00000551787 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.57
BRF1-219ENST00000551787 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
BRF1-219ENST00000551787 CLTCL1P53675 1640 aa24.86■■□□□ 1.57
BRF1-219ENST00000551787 TOM1O60784 492 aa24.86■■□□□ 1.57
BRF1-219ENST00000551787 TRPM2O94759 1503 aa24.86■■□□□ 1.57
BRF1-219ENST00000551787 RAB3GAP2Q9H2M9 1393 aa24.85■■□□□ 1.57
BRF1-219ENST00000551787 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
BRF1-219ENST00000551787 TBX22Q9Y458 520 aa24.84■■□□□ 1.57
BRF1-219ENST00000551787 TMEM94Q12767 1356 aa24.8■■□□□ 1.56
BRF1-219ENST00000551787 ADAMTS13Q76LX8 1427 aa24.79■■□□□ 1.56
BRF1-219ENST00000551787 RGL3Q3MIN7 710 aa24.76■■□□□ 1.55
BRF1-219ENST00000551787 ACIN1Q9UKV3 1341 aaKnown RBP24.76■■□□□ 1.55
BRF1-219ENST00000551787 CCDC144AA2RUR9 1427 aa24.73■■□□□ 1.55
BRF1-219ENST00000551787 HSPA1LP34931 641 aa24.72■■□□□ 1.55
BRF1-219ENST00000551787 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
BRF1-219ENST00000551787 KIF1BO60333 1816 aa24.72■■□□□ 1.55
BRF1-219ENST00000551787 NEXMIFQ5QGS0 1516 aa24.71■■□□□ 1.55
BRF1-219ENST00000551787 VGFO15240 615 aaPredicted RBP24.71■■□□□ 1.55
BRF1-219ENST00000551787 ALKQ9UM73 1620 aa24.71■■□□□ 1.55
BRF1-219ENST00000551787 RPGRIP1LQ68CZ1 1315 aa24.69■■□□□ 1.54
BRF1-219ENST00000551787 METP08581 1390 aa24.68■■□□□ 1.54
BRF1-219ENST00000551787 C14orf37Q86TY3 774 aa24.68■■□□□ 1.54
BRF1-219ENST00000551787 NKTRP30414 1462 aaKnown RBP24.68■■□□□ 1.54
BRF1-219ENST00000551787 PTPRUQ92729 1446 aa24.68■■□□□ 1.54
BRF1-219ENST00000551787 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
BRF1-219ENST00000551787 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
BRF1-219ENST00000551787 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
BRF1-219ENST00000551787 CHD2O14647 1828 aaKnown RBP24.66■■□□□ 1.54
BRF1-219ENST00000551787 HRCP23327 699 aa24.66■■□□□ 1.54
BRF1-219ENST00000551787 DIP2AQ14689 1571 aa24.65■■□□□ 1.54
BRF1-219ENST00000551787 NRXN3Q9Y4C0 1643 aa24.64■■□□□ 1.54
BRF1-219ENST00000551787 SETBP1Q9Y6X0 1596 aa24.64■■□□□ 1.54
BRF1-219ENST00000551787 SPATA31E1Q6ZUB1 1445 aa24.63■■□□□ 1.53
BRF1-219ENST00000551787 ADGRF5Q8IZF2 1346 aa24.62■■□□□ 1.53
BRF1-219ENST00000551787 MSH6P52701 1360 aa24.62■■□□□ 1.53
BRF1-219ENST00000551787 ANKRD30BQ9BXX2 1392 aa24.57■■□□□ 1.52
BRF1-219ENST00000551787 SLAIN2Q9P270 581 aa24.57■■□□□ 1.52
BRF1-219ENST00000551787 C19orf44Q9H6X5 657 aa24.56■■□□□ 1.52
BRF1-219ENST00000551787 ATF3P18847 181 aa24.54■■□□□ 1.52
BRF1-219ENST00000551787 PPLO60437 1756 aa24.54■■□□□ 1.52
BRF1-219ENST00000551787 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
BRF1-219ENST00000551787 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
BRF1-219ENST00000551787 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
BRF1-219ENST00000551787 TMEM132EQ6IEE7 984 aa24.5■■□□□ 1.51
BRF1-219ENST00000551787 CADPS2Q86UW7 1296 aa24.5■■□□□ 1.51
BRF1-219ENST00000551787 STK26Q9P289 416 aa24.5■■□□□ 1.51
BRF1-219ENST00000551787 XRN1Q8IZH2 1706 aaKnown RBP24.49■■□□□ 1.51
BRF1-219ENST00000551787 ROBO2Q9HCK4 1378 aa24.48■■□□□ 1.51
BRF1-219ENST00000551787 KDM2AQ9Y2K7 1162 aa24.47■■□□□ 1.51
BRF1-219ENST00000551787 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.44■■□□□ 1.5
BRF1-219ENST00000551787 CFAP70Q5T0N1 1121 aa24.44■■□□□ 1.5
BRF1-219ENST00000551787 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
BRF1-219ENST00000551787 DCAF11Q8TEB1 546 aa24.43■■□□□ 1.5
BRF1-219ENST00000551787 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
BRF1-219ENST00000551787 PIK3C2GO75747 1445 aa24.43■■□□□ 1.5
BRF1-219ENST00000551787 C14orf93Q9H972 538 aaKnown RBP24.42■■□□□ 1.5
BRF1-219ENST00000551787 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
BRF1-219ENST00000551787 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
BRF1-219ENST00000551787 ADGRL3Q9HAR2 1447 aa24.39■■□□□ 1.5
BRF1-219ENST00000551787 PTCH1Q13635 1447 aa24.38■■□□□ 1.49
BRF1-219ENST00000551787 BRINP3Q76B58 766 aa24.37■■□□□ 1.49
BRF1-219ENST00000551787 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
BRF1-219ENST00000551787 MYOM2P54296 1465 aa24.35■■□□□ 1.49
BRF1-219ENST00000551787 NRXN1Q9ULB1 1477 aa24.35■■□□□ 1.49
BRF1-219ENST00000551787 TRIM26Q12899 539 aaPredicted RBP24.35■■□□□ 1.49
BRF1-219ENST00000551787 DCCP43146 1447 aa24.35■■□□□ 1.49
BRF1-219ENST00000551787 DHX57Q6P158 1386 aaKnown RBP24.34■■□□□ 1.49
BRF1-219ENST00000551787 ASXL1Q8IXJ9 1541 aa24.34■■□□□ 1.49
BRF1-219ENST00000551787 MST1RQ04912 1400 aa24.34■■□□□ 1.49
BRF1-219ENST00000551787 ABCC11Q96J66 1382 aa24.33■■□□□ 1.49
BRF1-219ENST00000551787 PLEKHH1Q9ULM0 1364 aa24.33■■□□□ 1.49
BRF1-219ENST00000551787 ILDR2Q71H61 639 aa24.33■■□□□ 1.49
BRF1-219ENST00000551787 YTHDC2Q9H6S0 1430 aaKnown RBP24.33■■□□□ 1.49
BRF1-219ENST00000551787 PRAG1Q86YV5 1406 aa24.31■■□□□ 1.48
BRF1-219ENST00000551787 NALCNQ8IZF0 1738 aa24.31■■□□□ 1.48
BRF1-219ENST00000551787 DDX17Q92841 729 aaKnown RBP24.3■■□□□ 1.48
BRF1-219ENST00000551787 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
BRF1-219ENST00000551787 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
BRF1-219ENST00000551787 TECPR2O15040 1411 aa24.28■■□□□ 1.48
BRF1-219ENST00000551787 NUTM2FA1L443 756 aa24.28■■□□□ 1.48
BRF1-219ENST00000551787 SAFB2Q14151 953 aaKnown RBP eCLIP24.28■■□□□ 1.48
BRF1-219ENST00000551787 ORAI2Q96SN7 254 aa24.28■■□□□ 1.48
BRF1-219ENST00000551787 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
BRF1-219ENST00000551787 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
BRF1-219ENST00000551787 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
BRF1-219ENST00000551787 STAC3Q96MF2 364 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms