RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 SEMA3EO15041 775 aa13.59□□□□□ -0.23
RBFOX1-213ENST00000551752 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-213ENST00000551752 KIF13AQ9H1H9 1805 aa13.59□□□□□ -0.23
RBFOX1-213ENST00000551752 PBX2P40425 430 aa13.57□□□□□ -0.24
RBFOX1-213ENST00000551752 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
RBFOX1-213ENST00000551752 KCNH8Q96L42 1107 aa13.57□□□□□ -0.24
RBFOX1-213ENST00000551752 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
RBFOX1-213ENST00000551752 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
RBFOX1-213ENST00000551752 DIP2BQ9P265 1576 aa13.56□□□□□ -0.24
RBFOX1-213ENST00000551752 MLLT3P42568 568 aaPredicted RBP13.55□□□□□ -0.24
RBFOX1-213ENST00000551752 GLI2P10070 1586 aa13.54□□□□□ -0.24
RBFOX1-213ENST00000551752 ARHGAP33O14559 1287 aa13.54□□□□□ -0.24
RBFOX1-213ENST00000551752 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-213ENST00000551752 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
RBFOX1-213ENST00000551752 PTPREP23469 700 aa13.53□□□□□ -0.24
RBFOX1-213ENST00000551752 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
RBFOX1-213ENST00000551752 ASXL2Q76L83 1435 aa13.53□□□□□ -0.24
RBFOX1-213ENST00000551752 POTEEQ6S8J3 1075 aa13.52□□□□□ -0.25
RBFOX1-213ENST00000551752 KIF21BO75037 1637 aa13.51□□□□□ -0.25
RBFOX1-213ENST00000551752 MAP3K7O43318 606 aa13.51□□□□□ -0.25
RBFOX1-213ENST00000551752 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-213ENST00000551752 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
RBFOX1-213ENST00000551752 ABCA8O94911 1581 aa13.5□□□□□ -0.25
RBFOX1-213ENST00000551752 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-213ENST00000551752 OSBPP22059 807 aa13.5□□□□□ -0.25
RBFOX1-213ENST00000551752 KRTAP3-3Q9BYR6 98 aa13.5□□□□□ -0.25
RBFOX1-213ENST00000551752 KRTAP3-2Q9BYR7 98 aa13.5□□□□□ -0.25
RBFOX1-213ENST00000551752 PSEN2P49810 448 aa13.49□□□□□ -0.25
RBFOX1-213ENST00000551752 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
RBFOX1-213ENST00000551752 C6orf132Q5T0Z8 1188 aa13.48□□□□□ -0.25
RBFOX1-213ENST00000551752 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-213ENST00000551752 EPRSP07814 1512 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-213ENST00000551752 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.25
RBFOX1-213ENST00000551752 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.26
RBFOX1-213ENST00000551752 TULP1O00294 542 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-213ENST00000551752 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-213ENST00000551752 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
RBFOX1-213ENST00000551752 WDR7Q9Y4E6 1490 aa13.44□□□□□ -0.26
RBFOX1-213ENST00000551752 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-213ENST00000551752 EFCAB5A4FU69 1503 aa13.44□□□□□ -0.26
RBFOX1-213ENST00000551752 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
RBFOX1-213ENST00000551752 PPP1R3GB7ZBB8 358 aa13.42□□□□□ -0.26
RBFOX1-213ENST00000551752 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
RBFOX1-213ENST00000551752 MAP3K4Q9Y6R4 1608 aa13.4□□□□□ -0.26
RBFOX1-213ENST00000551752 ATP10BO94823 1461 aa13.4□□□□□ -0.26
RBFOX1-213ENST00000551752 COL9A1P20849 921 aa13.39□□□□□ -0.27
RBFOX1-213ENST00000551752 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
RBFOX1-213ENST00000551752 PHLDB1Q86UU1 1377 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 TK2O00142 265 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 KDM6BO15054 1643 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
RBFOX1-213ENST00000551752 RBM26Q5T8P6 1007 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-213ENST00000551752 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
RBFOX1-213ENST00000551752 CERKQ8TCT0 537 aa13.36□□□□□ -0.27
RBFOX1-213ENST00000551752 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
RBFOX1-213ENST00000551752 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-213ENST00000551752 SLC4A5Q9BY07 1137 aa13.35□□□□□ -0.27
RBFOX1-213ENST00000551752 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
RBFOX1-213ENST00000551752 TSPOAP1O95153 1857 aa13.35□□□□□ -0.27
RBFOX1-213ENST00000551752 VPS9D1Q9Y2B5 631 aa13.34□□□□□ -0.27
RBFOX1-213ENST00000551752 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
RBFOX1-213ENST00000551752 NUP153P49790 1475 aaKnown RBP13.33□□□□□ -0.28
RBFOX1-213ENST00000551752 FHOD3Q2V2M9 1422 aa13.32□□□□□ -0.28
RBFOX1-213ENST00000551752 BCANQ96GW7 911 aa13.32□□□□□ -0.28
RBFOX1-213ENST00000551752 PROX2Q3B8N5 592 aa13.31□□□□□ -0.28
RBFOX1-213ENST00000551752 PLEKHD1A6NEE1 506 aa13.3□□□□□ -0.28
RBFOX1-213ENST00000551752 STAC3Q96MF2 364 aa13.3□□□□□ -0.28
RBFOX1-213ENST00000551752 ABCA9Q8IUA7 1624 aa13.29□□□□□ -0.28
RBFOX1-213ENST00000551752 NPDC1Q9NQX5 325 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-213ENST00000551752 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
RBFOX1-213ENST00000551752 PRSS12P56730 875 aa13.28□□□□□ -0.28
RBFOX1-213ENST00000551752 PTGDRQ13258 359 aa13.28□□□□□ -0.28
RBFOX1-213ENST00000551752 SPNS2Q8IVW8 549 aa13.28□□□□□ -0.28
RBFOX1-213ENST00000551752 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
RBFOX1-213ENST00000551752 COL17A1Q9UMD9 1497 aaPredicted RBP13.28□□□□□ -0.28
RBFOX1-213ENST00000551752 ARAP3Q8WWN8 1544 aa13.28□□□□□ -0.28
RBFOX1-213ENST00000551752 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
RBFOX1-213ENST00000551752 FCHSD2O94868 740 aa13.27□□□□□ -0.29
RBFOX1-213ENST00000551752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.29
RBFOX1-213ENST00000551752 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
RBFOX1-213ENST00000551752 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-213ENST00000551752 NEO1Q92859 1461 aa13.26□□□□□ -0.29
RBFOX1-213ENST00000551752 RABGEF1Q9UJ41 708 aa13.26□□□□□ -0.29
RBFOX1-213ENST00000551752 HRO43593 1189 aa13.25□□□□□ -0.29
RBFOX1-213ENST00000551752 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
RBFOX1-213ENST00000551752 KIAA1468Q9P260 1216 aa13.25□□□□□ -0.29
RBFOX1-213ENST00000551752 CDK11AQ9UQ88 783 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-213ENST00000551752 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
RBFOX1-213ENST00000551752 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
RBFOX1-213ENST00000551752 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-213ENST00000551752 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
RBFOX1-213ENST00000551752 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-213ENST00000551752 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
RBFOX1-213ENST00000551752 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
RBFOX1-213ENST00000551752 BHMG1C9JSJ3 638 aaPredicted RBP13.21□□□□□ -0.29
RBFOX1-213ENST00000551752 HIC1Q14526 733 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms