RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 ZFYVE9O95405 1425 aa35.2■■■■□ 3.23
TROAP-216ENST00000551567 SENP3Q9H4L4 574 aaPredicted RBP35.18■■■■□ 3.22
TROAP-216ENST00000551567 RIMS2Q9UQ26 1411 aa35.17■■■■□ 3.22
TROAP-216ENST00000551567 BCANQ96GW7 911 aa35.16■■■■□ 3.22
TROAP-216ENST00000551567 CHGAP10645 457 aaKnown RBP35.15■■■■□ 3.22
TROAP-216ENST00000551567 ILDR2Q71H61 639 aa35.14■■■■□ 3.22
TROAP-216ENST00000551567 PPP1R15AO75807 674 aaPredicted RBP35.12■■■■□ 3.21
TROAP-216ENST00000551567 NWD1Q149M9 1564 aa35.11■■■■□ 3.21
TROAP-216ENST00000551567 KCNA6P17658 529 aa35.1■■■■□ 3.21
TROAP-216ENST00000551567 PLEKHG1Q9ULL1 1385 aa35.1■■■■□ 3.21
TROAP-216ENST00000551567 SPHKAPQ2M3C7 1700 aa35.09■■■■□ 3.21
TROAP-216ENST00000551567 TMEM94Q12767 1356 aa35.08■■■■□ 3.21
TROAP-216ENST00000551567 NKTRP30414 1462 aaKnown RBP35.05■■■■□ 3.2
TROAP-216ENST00000551567 HDGFP51858 240 aaKnown RBP35.05■■■■□ 3.2
TROAP-216ENST00000551567 NAIPQ13075 1403 aa35.04■■■■□ 3.2
TROAP-216ENST00000551567 MED1Q15648 1581 aaPredicted RBP35.04■■■■□ 3.2
TROAP-216ENST00000551567 NUTM2DQ5VT03 806 aaPredicted RBP35.03■■■■□ 3.2
TROAP-216ENST00000551567 PROSER2Q86WR7 435 aaPredicted RBP35.03■■■■□ 3.2
TROAP-216ENST00000551567 CHD2O14647 1828 aaKnown RBP35.03■■■■□ 3.2
TROAP-216ENST00000551567 RBM33Q96EV2 1170 aaKnown RBP35.02■■■■□ 3.2
TROAP-216ENST00000551567 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.01■■■■□ 3.2
TROAP-216ENST00000551567 DIP2AQ14689 1571 aa34.95■■■■□ 3.18
TROAP-216ENST00000551567 ADAMTS13Q76LX8 1427 aa34.94■■■■□ 3.18
TROAP-216ENST00000551567 CLTCL1P53675 1640 aa34.92■■■■□ 3.18
TROAP-216ENST00000551567 HFM1A2PYH4 1435 aa34.91■■■■□ 3.18
TROAP-216ENST00000551567 TBX22Q9Y458 520 aa34.91■■■■□ 3.18
TROAP-216ENST00000551567 TRPM2O94759 1503 aa34.89■■■■□ 3.18
TROAP-216ENST00000551567 ROBO1Q9Y6N7 1651 aa34.89■■■■□ 3.18
TROAP-216ENST00000551567 MSH6P52701 1360 aa34.87■■■■□ 3.17
TROAP-216ENST00000551567 FAM135BQ49AJ0 1406 aa34.87■■■■□ 3.17
TROAP-216ENST00000551567 SOCS7O14512 581 aa34.84■■■■□ 3.17
TROAP-216ENST00000551567 ZNF326Q5BKZ1 582 aaKnown RBP34.84■■■■□ 3.17
TROAP-216ENST00000551567 TRIM52Q96A61 297 aa34.84■■■■□ 3.17
TROAP-216ENST00000551567 KIF1BO60333 1816 aa34.83■■■■□ 3.17
TROAP-216ENST00000551567 NRXN3Q9Y4C0 1643 aa34.83■■■■□ 3.17
TROAP-216ENST00000551567 PIK3R4Q99570 1358 aa34.8■■■■□ 3.16
TROAP-216ENST00000551567 SETBP1Q9Y6X0 1596 aa34.79■■■■□ 3.16
TROAP-216ENST00000551567 NEXMIFQ5QGS0 1516 aa34.77■■■■□ 3.16
TROAP-216ENST00000551567 PTPRUQ92729 1446 aa34.75■■■■□ 3.15
TROAP-216ENST00000551567 C14orf37Q86TY3 774 aa34.74■■■■□ 3.15
TROAP-216ENST00000551567 PHF23Q9BUL5 403 aaPredicted RBP34.74■■■■□ 3.15
TROAP-216ENST00000551567 NCOA3Q9Y6Q9 1424 aa34.72■■■■□ 3.15
TROAP-216ENST00000551567 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.72■■■■□ 3.15
TROAP-216ENST00000551567 SLC4A1APQ9BWU0 796 aaKnown RBP34.72■■■■□ 3.15
TROAP-216ENST00000551567 XRN1Q8IZH2 1706 aaKnown RBP34.72■■■■□ 3.15
TROAP-216ENST00000551567 SLAIN2Q9P270 581 aa34.71■■■■□ 3.15
TROAP-216ENST00000551567 AMOTL2Q9Y2J4 779 aa34.71■■■■□ 3.15
TROAP-216ENST00000551567 PHLPP1O60346 1717 aa34.68■■■■□ 3.14
TROAP-216ENST00000551567 METP08581 1390 aa34.63■■■■□ 3.13
TROAP-216ENST00000551567 C19orf44Q9H6X5 657 aa34.61■■■■□ 3.13
TROAP-216ENST00000551567 ATF3P18847 181 aa34.59■■■■□ 3.13
TROAP-216ENST00000551567 FOXD1Q16676 465 aa34.59■■■■□ 3.13
TROAP-216ENST00000551567 CADPS2Q86UW7 1296 aa34.59■■■■□ 3.13
TROAP-216ENST00000551567 PPLO60437 1756 aa34.57■■■■□ 3.12
TROAP-216ENST00000551567 COL16A1Q07092 1604 aaPredicted RBP34.56■■■■□ 3.12
TROAP-216ENST00000551567 SETD1AO15047 1707 aaKnown RBP34.55■■■■□ 3.12
TROAP-216ENST00000551567 VGFO15240 615 aaPredicted RBP34.51■■■■□ 3.12
TROAP-216ENST00000551567 DCCP43146 1447 aa34.51■■■■□ 3.12
TROAP-216ENST00000551567 NALCNQ8IZF0 1738 aa34.5■■■■□ 3.11
TROAP-216ENST00000551567 AHDC1Q5TGY3 1603 aaPredicted RBP34.49■■■■□ 3.11
TROAP-216ENST00000551567 RPGRIP1LQ68CZ1 1315 aa34.48■■■■□ 3.11
TROAP-216ENST00000551567 CCDC144AA2RUR9 1427 aa34.47■■■■□ 3.11
TROAP-216ENST00000551567 JCADQ9P266 1359 aa34.47■■■■□ 3.11
TROAP-216ENST00000551567 MPHOSPH9Q99550 1183 aa34.46■■■■□ 3.11
TROAP-216ENST00000551567 RGS17Q9UGC6 210 aaPredicted RBP34.46■■■■□ 3.11
TROAP-216ENST00000551567 ADGRL3Q9HAR2 1447 aa34.46■■■■□ 3.11
TROAP-216ENST00000551567 MST1RQ04912 1400 aa34.42■■■■□ 3.1
TROAP-216ENST00000551567 BRINP3Q76B58 766 aa34.42■■■■□ 3.1
TROAP-216ENST00000551567 ASXL1Q8IXJ9 1541 aa34.4■■■■□ 3.1
TROAP-216ENST00000551567 IFT172Q9UG01 1749 aa34.4■■■■□ 3.1
TROAP-216ENST00000551567 PTCH1Q13635 1447 aa34.39■■■■□ 3.1
TROAP-216ENST00000551567 SETD5Q9C0A6 1442 aa34.39■■■■□ 3.1
TROAP-216ENST00000551567 SPATA31E1Q6ZUB1 1445 aa34.38■■■■□ 3.09
TROAP-216ENST00000551567 SHPRHQ149N8 1683 aa34.38■■■■□ 3.09
TROAP-216ENST00000551567 RGL3Q3MIN7 710 aa34.37■■■■□ 3.09
TROAP-216ENST00000551567 ROBO2Q9HCK4 1378 aa34.36■■■■□ 3.09
TROAP-216ENST00000551567 NHSL1Q5SYE7 1610 aa34.35■■■■□ 3.09
TROAP-216ENST00000551567 ADGRF5Q8IZF2 1346 aa34.32■■■■□ 3.09
TROAP-216ENST00000551567 LRP6O75581 1613 aa34.32■■■■□ 3.08
TROAP-216ENST00000551567 PRAG1Q86YV5 1406 aa34.31■■■■□ 3.08
TROAP-216ENST00000551567 POTEAQ6S8J7 498 aa34.29■■■■□ 3.08
TROAP-216ENST00000551567 SPATA31A6Q5VVP1 1343 aa34.29■■■■□ 3.08
TROAP-216ENST00000551567 RAB3GAP2Q9H2M9 1393 aa34.28■■■■□ 3.08
TROAP-216ENST00000551567 ACIN1Q9UKV3 1341 aaKnown RBP34.28■■■■□ 3.08
TROAP-216ENST00000551567 ANKRD30BQ9BXX2 1392 aa34.27■■■■□ 3.08
TROAP-216ENST00000551567 C1orf167Q5SNV9 1468 aa34.24■■■■□ 3.07
TROAP-216ENST00000551567 DDX17Q92841 729 aaKnown RBP34.22■■■■□ 3.07
TROAP-216ENST00000551567 MEX3CQ5U5Q3 659 aaKnown RBP34.21■■■■□ 3.07
TROAP-216ENST00000551567 PIK3C2GO75747 1445 aa34.21■■■■□ 3.07
TROAP-216ENST00000551567 KNDC1Q76NI1 1749 aa34.17■■■■□ 3.06
TROAP-216ENST00000551567 STK26Q9P289 416 aa34.17■■■■□ 3.06
TROAP-216ENST00000551567 NUTM2BA6NNL0 878 aaPredicted RBP34.16■■■■□ 3.06
TROAP-216ENST00000551567 NUTM2EB1AL46 878 aaPredicted RBP34.16■■■■□ 3.06
TROAP-216ENST00000551567 NUTM2AQ8IVF1 878 aaPredicted RBP34.16■■■■□ 3.06
TROAP-216ENST00000551567 CDC42BPGQ6DT37 1551 aa34.15■■■■□ 3.06
TROAP-216ENST00000551567 LAMC1P11047 1609 aa34.15■■■■□ 3.06
TROAP-216ENST00000551567 TECPR2O15040 1411 aa34.13■■■■□ 3.05
TROAP-216ENST00000551567 LRPPRCP42704 1394 aaKnown RBP34.13■■■■□ 3.05
TROAP-216ENST00000551567 TMEM132EQ6IEE7 984 aa34.13■■■■□ 3.05
TROAP-216ENST00000551567 LRRC59Q96AG4 307 aaKnown RBP34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms