RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-209ENST00000551424 PROSER2Q86WR7 435 aaPredicted RBP35.2■■■■□ 3.23
CNTN1-209ENST00000551424 RBM33Q96EV2 1170 aaKnown RBP35.2■■■■□ 3.23
CNTN1-209ENST00000551424 PPP1R15AO75807 674 aaPredicted RBP35.16■■■■□ 3.22
CNTN1-209ENST00000551424 CHGAP10645 457 aaKnown RBP35.15■■■■□ 3.22
CNTN1-209ENST00000551424 RIMS2Q9UQ26 1411 aa35.15■■■■□ 3.22
CNTN1-209ENST00000551424 TMEM131LA2VDJ0 1609 aa35.14■■■■□ 3.22
CNTN1-209ENST00000551424 NWD1Q149M9 1564 aa35.14■■■■□ 3.22
CNTN1-209ENST00000551424 ITGAEP38570 1179 aa35.14■■■■□ 3.22
CNTN1-209ENST00000551424 E9PCH4 1651 aa35.14■■■■□ 3.22
CNTN1-209ENST00000551424 ZFYVE9O95405 1425 aa35.14■■■■□ 3.22
CNTN1-209ENST00000551424 NKTRP30414 1462 aaKnown RBP35.13■■■■□ 3.21
CNTN1-209ENST00000551424 ROCK1Q13464 1354 aa35.13■■■■□ 3.21
CNTN1-209ENST00000551424 PPARGC1BQ86YN6 1023 aaKnown RBP35.12■■■■□ 3.21
CNTN1-209ENST00000551424 PLEKHG1Q9ULL1 1385 aa35.1■■■■□ 3.21
CNTN1-209ENST00000551424 FAM135BQ49AJ0 1406 aa35.09■■■■□ 3.21
CNTN1-209ENST00000551424 IQGAP3Q86VI3 1631 aa35.09■■■■□ 3.21
CNTN1-209ENST00000551424 HDGFP51858 240 aaKnown RBP35.07■■■■□ 3.2
CNTN1-209ENST00000551424 ROBO1Q9Y6N7 1651 aa35.06■■■■□ 3.2
CNTN1-209ENST00000551424 NUP155O75694 1391 aa35.03■■■■□ 3.2
CNTN1-209ENST00000551424 MSH6P52701 1360 aa35.03■■■■□ 3.2
CNTN1-209ENST00000551424 NUTM2DQ5VT03 806 aaPredicted RBP35.03■■■■□ 3.2
CNTN1-209ENST00000551424 CHD2O14647 1828 aaKnown RBP35.03■■■■□ 3.2
CNTN1-209ENST00000551424 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.99■■■■□ 3.19
CNTN1-209ENST00000551424 TBX22Q9Y458 520 aa34.95■■■■□ 3.19
CNTN1-209ENST00000551424 ADAMTS13Q76LX8 1427 aa34.91■■■■□ 3.18
CNTN1-209ENST00000551424 C14orf37Q86TY3 774 aa34.9■■■■□ 3.18
CNTN1-209ENST00000551424 SLAIN2Q9P270 581 aa34.9■■■■□ 3.18
CNTN1-209ENST00000551424 DIP2AQ14689 1571 aa34.89■■■■□ 3.18
CNTN1-209ENST00000551424 RGS17Q9UGC6 210 aaPredicted RBP34.89■■■■□ 3.18
CNTN1-209ENST00000551424 PHLPP1O60346 1717 aa34.87■■■■□ 3.17
CNTN1-209ENST00000551424 SPHKAPQ2M3C7 1700 aa34.86■■■■□ 3.17
CNTN1-209ENST00000551424 TRPM2O94759 1503 aa34.82■■■■□ 3.16
CNTN1-209ENST00000551424 PIK3R4Q99570 1358 aa34.8■■■■□ 3.16
CNTN1-209ENST00000551424 NCOA3Q9Y6Q9 1424 aa34.79■■■■□ 3.16
CNTN1-209ENST00000551424 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.78■■■■□ 3.16
CNTN1-209ENST00000551424 ZNF326Q5BKZ1 582 aaKnown RBP34.77■■■■□ 3.16
CNTN1-209ENST00000551424 AMOTL2Q9Y2J4 779 aa34.75■■■■□ 3.15
CNTN1-209ENST00000551424 PTPRUQ92729 1446 aa34.74■■■■□ 3.15
CNTN1-209ENST00000551424 JCADQ9P266 1359 aa34.74■■■■□ 3.15
CNTN1-209ENST00000551424 ATF3P18847 181 aa34.73■■■■□ 3.15
CNTN1-209ENST00000551424 COL16A1Q07092 1604 aaPredicted RBP34.73■■■■□ 3.15
CNTN1-209ENST00000551424 CADPS2Q86UW7 1296 aa34.72■■■■□ 3.15
CNTN1-209ENST00000551424 C19orf44Q9H6X5 657 aa34.72■■■■□ 3.15
CNTN1-209ENST00000551424 NRXN3Q9Y4C0 1643 aa34.72■■■■□ 3.15
CNTN1-209ENST00000551424 POTEAQ6S8J7 498 aa34.71■■■■□ 3.15
CNTN1-209ENST00000551424 RRBP1Q9P2E9 1410 aaKnown RBP34.7■■■■□ 3.15
CNTN1-209ENST00000551424 SETBP1Q9Y6X0 1596 aa34.69■■■■□ 3.14
CNTN1-209ENST00000551424 CLTCL1P53675 1640 aa34.69■■■■□ 3.14
CNTN1-209ENST00000551424 XRN1Q8IZH2 1706 aaKnown RBP34.67■■■■□ 3.14
CNTN1-209ENST00000551424 NAIPQ13075 1403 aa34.65■■■■□ 3.14
CNTN1-209ENST00000551424 AHDC1Q5TGY3 1603 aaPredicted RBP34.62■■■■□ 3.13
CNTN1-209ENST00000551424 NEXMIFQ5QGS0 1516 aa34.6■■■■□ 3.13
CNTN1-209ENST00000551424 KIF1BO60333 1816 aa34.6■■■■□ 3.13
CNTN1-209ENST00000551424 METP08581 1390 aa34.6■■■■□ 3.13
CNTN1-209ENST00000551424 TRIM52Q96A61 297 aa34.58■■■■□ 3.13
CNTN1-209ENST00000551424 LRP6O75581 1613 aa34.56■■■■□ 3.12
CNTN1-209ENST00000551424 BRINP3Q76B58 766 aa34.56■■■■□ 3.12
CNTN1-209ENST00000551424 DCCP43146 1447 aa34.55■■■■□ 3.12
CNTN1-209ENST00000551424 MEX3CQ5U5Q3 659 aaKnown RBP34.55■■■■□ 3.12
CNTN1-209ENST00000551424 SPATA31A6Q5VVP1 1343 aa34.54■■■■□ 3.12
CNTN1-209ENST00000551424 SHPRHQ149N8 1683 aa34.54■■■■□ 3.12
CNTN1-209ENST00000551424 ASXL1Q8IXJ9 1541 aa34.5■■■■□ 3.11
CNTN1-209ENST00000551424 SETD1AO15047 1707 aaKnown RBP34.5■■■■□ 3.11
CNTN1-209ENST00000551424 HFM1A2PYH4 1435 aa34.49■■■■□ 3.11
CNTN1-209ENST00000551424 MST1RQ04912 1400 aa34.49■■■■□ 3.11
CNTN1-209ENST00000551424 NALCNQ8IZF0 1738 aa34.47■■■■□ 3.11
CNTN1-209ENST00000551424 ADGRL3Q9HAR2 1447 aa34.47■■■■□ 3.11
CNTN1-209ENST00000551424 SLC4A1APQ9BWU0 796 aaKnown RBP34.45■■■■□ 3.11
CNTN1-209ENST00000551424 NUTM2BA6NNL0 878 aaPredicted RBP34.44■■■■□ 3.1
CNTN1-209ENST00000551424 NUTM2EB1AL46 878 aaPredicted RBP34.44■■■■□ 3.1
CNTN1-209ENST00000551424 NUTM2AQ8IVF1 878 aaPredicted RBP34.44■■■■□ 3.1
CNTN1-209ENST00000551424 NHSL1Q5SYE7 1610 aa34.42■■■■□ 3.1
CNTN1-209ENST00000551424 VGFO15240 615 aaPredicted RBP34.39■■■■□ 3.1
CNTN1-209ENST00000551424 ZNF772Q68DY9 489 aaPredicted RBP34.38■■■■□ 3.09
CNTN1-209ENST00000551424 DDX17Q92841 729 aaKnown RBP34.37■■■■□ 3.09
CNTN1-209ENST00000551424 SETD5Q9C0A6 1442 aa34.36■■■■□ 3.09
CNTN1-209ENST00000551424 PPLO60437 1756 aa34.34■■■■□ 3.09
CNTN1-209ENST00000551424 PTCH1Q13635 1447 aa34.33■■■■□ 3.09
CNTN1-209ENST00000551424 FOXD1Q16676 465 aa34.33■■■■□ 3.09
CNTN1-209ENST00000551424 RPGRIP1LQ68CZ1 1315 aa34.32■■■■□ 3.09
CNTN1-209ENST00000551424 ROBO2Q9HCK4 1378 aa34.32■■■■□ 3.08
CNTN1-209ENST00000551424 LRRC59Q96AG4 307 aaKnown RBP34.3■■■■□ 3.08
CNTN1-209ENST00000551424 C1orf167Q5SNV9 1468 aa34.29■■■■□ 3.08
CNTN1-209ENST00000551424 AFF2P51816 1311 aa34.25■■■■□ 3.07
CNTN1-209ENST00000551424 PNPLA6Q8IY17 1366 aa34.24■■■■□ 3.07
CNTN1-209ENST00000551424 CCDC144AA2RUR9 1427 aa34.21■■■■□ 3.07
CNTN1-209ENST00000551424 RXRBP28702 533 aa34.21■■■■□ 3.07
CNTN1-209ENST00000551424 ORAI2Q96SN7 254 aa34.21■■■■□ 3.07
CNTN1-209ENST00000551424 PRAG1Q86YV5 1406 aa34.2■■■■□ 3.06
CNTN1-209ENST00000551424 RGL3Q3MIN7 710 aa34.19■■■■□ 3.06
CNTN1-209ENST00000551424 C8orf37Q96NL8 207 aa34.19■■■■□ 3.06
CNTN1-209ENST00000551424 ADGRF5Q8IZF2 1346 aa34.17■■■■□ 3.06
CNTN1-209ENST00000551424 LAMC1P11047 1609 aa34.15■■■■□ 3.06
CNTN1-209ENST00000551424 MPHOSPH9Q99550 1183 aa34.14■■■■□ 3.06
CNTN1-209ENST00000551424 ADAMTS2O95450 1211 aa34.13■■■■□ 3.05
CNTN1-209ENST00000551424 STK26Q9P289 416 aa34.12■■■■□ 3.05
CNTN1-209ENST00000551424 IFT172Q9UG01 1749 aa34.11■■■■□ 3.05
CNTN1-209ENST00000551424 SPATA31E1Q6ZUB1 1445 aa34.11■■■■□ 3.05
CNTN1-209ENST00000551424 SOS2Q07890 1332 aaPredicted RBP34.1■■■■□ 3.05
CNTN1-209ENST00000551424 UPF1Q92900 1129 aaKnown RBP eCLIP34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms