RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 BCANQ96GW7 911 aa28.39■■■□□ 2.14
DDX54-208ENST00000551344 SLC26A8Q96RN1 970 aa28.38■■■□□ 2.13
DDX54-208ENST00000551344 PLEKHG1Q9ULL1 1385 aa28.37■■■□□ 2.13
DDX54-208ENST00000551344 SPHKAPQ2M3C7 1700 aa28.36■■■□□ 2.13
DDX54-208ENST00000551344 MYO5BQ9ULV0 1848 aa28.36■■■□□ 2.13
DDX54-208ENST00000551344 KCNA6P17658 529 aa28.34■■■□□ 2.13
DDX54-208ENST00000551344 TOM1O60784 492 aa28.33■■■□□ 2.13
DDX54-208ENST00000551344 SETD5Q9C0A6 1442 aa28.32■■■□□ 2.12
DDX54-208ENST00000551344 LRRC7Q96NW7 1537 aa28.32■■■□□ 2.12
DDX54-208ENST00000551344 TBX22Q9Y458 520 aa28.31■■■□□ 2.12
DDX54-208ENST00000551344 STRCP1A6NGW2 1772 aa28.31■■■□□ 2.12
DDX54-208ENST00000551344 TRPM2O94759 1503 aa28.3■■■□□ 2.12
DDX54-208ENST00000551344 NUTM2DQ5VT03 806 aaPredicted RBP28.3■■■□□ 2.12
DDX54-208ENST00000551344 ZNF326Q5BKZ1 582 aaKnown RBP28.29■■■□□ 2.12
DDX54-208ENST00000551344 MPHOSPH9Q99550 1183 aa28.29■■■□□ 2.12
DDX54-208ENST00000551344 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
DDX54-208ENST00000551344 CLTCL1P53675 1640 aa28.23■■■□□ 2.11
DDX54-208ENST00000551344 FOXD1Q16676 465 aa28.23■■■□□ 2.11
DDX54-208ENST00000551344 PROSER2Q86WR7 435 aaPredicted RBP28.21■■■□□ 2.11
DDX54-208ENST00000551344 ADAMTS13Q76LX8 1427 aa28.2■■■□□ 2.11
DDX54-208ENST00000551344 PIP4K2BP78356 416 aa28.19■■■□□ 2.1
DDX54-208ENST00000551344 RAB3GAP2Q9H2M9 1393 aa28.19■■■□□ 2.1
DDX54-208ENST00000551344 PIK3R4Q99570 1358 aa28.18■■■□□ 2.1
DDX54-208ENST00000551344 TMEM94Q12767 1356 aa28.17■■■□□ 2.1
DDX54-208ENST00000551344 RPGRIP1LQ68CZ1 1315 aa28.17■■■□□ 2.1
DDX54-208ENST00000551344 SCAF1Q9H7N4 1312 aaKnown RBP28.17■■■□□ 2.1
DDX54-208ENST00000551344 KIF1BO60333 1816 aa28.16■■■□□ 2.1
DDX54-208ENST00000551344 HRCP23327 699 aa28.16■■■□□ 2.1
DDX54-208ENST00000551344 NKTRP30414 1462 aaKnown RBP28.15■■■□□ 2.1
DDX54-208ENST00000551344 VGFO15240 615 aaPredicted RBP28.15■■■□□ 2.1
DDX54-208ENST00000551344 DIP2AQ14689 1571 aa28.14■■■□□ 2.1
DDX54-208ENST00000551344 NWD1Q149M9 1564 aa28.14■■■□□ 2.1
DDX54-208ENST00000551344 CCDC144AA2RUR9 1427 aa28.12■■■□□ 2.09
DDX54-208ENST00000551344 CHD2O14647 1828 aaKnown RBP28.12■■■□□ 2.09
DDX54-208ENST00000551344 NEXMIFQ5QGS0 1516 aa28.11■■■□□ 2.09
DDX54-208ENST00000551344 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
DDX54-208ENST00000551344 ALKQ9UM73 1620 aa28.09■■■□□ 2.09
DDX54-208ENST00000551344 SETBP1Q9Y6X0 1596 aa28.08■■■□□ 2.09
DDX54-208ENST00000551344 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
DDX54-208ENST00000551344 XIRP1Q702N8 1843 aaKnown RBP28.08■■■□□ 2.09
DDX54-208ENST00000551344 NCOA3Q9Y6Q9 1424 aa28.06■■■□□ 2.08
DDX54-208ENST00000551344 HSPA1LP34931 641 aa28.05■■■□□ 2.08
DDX54-208ENST00000551344 MSH6P52701 1360 aa28.03■■■□□ 2.08
DDX54-208ENST00000551344 RGL3Q3MIN7 710 aa28.03■■■□□ 2.08
DDX54-208ENST00000551344 NRXN3Q9Y4C0 1643 aa28.03■■■□□ 2.08
DDX54-208ENST00000551344 PTPRUQ92729 1446 aa28.01■■■□□ 2.08
DDX54-208ENST00000551344 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
DDX54-208ENST00000551344 METP08581 1390 aa28■■■□□ 2.07
DDX54-208ENST00000551344 C14orf37Q86TY3 774 aa27.97■■■□□ 2.07
DDX54-208ENST00000551344 C19orf44Q9H6X5 657 aa27.97■■■□□ 2.07
DDX54-208ENST00000551344 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
DDX54-208ENST00000551344 ANKRD30BQ9BXX2 1392 aa27.97■■■□□ 2.07
DDX54-208ENST00000551344 SLAIN2Q9P270 581 aa27.95■■■□□ 2.06
DDX54-208ENST00000551344 PPLO60437 1756 aa27.94■■■□□ 2.06
DDX54-208ENST00000551344 CADPS2Q86UW7 1296 aa27.92■■■□□ 2.06
DDX54-208ENST00000551344 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
DDX54-208ENST00000551344 ATF3P18847 181 aa27.9■■■□□ 2.06
DDX54-208ENST00000551344 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.06
DDX54-208ENST00000551344 DISP3Q9P2K9 1392 aa27.85■■■□□ 2.05
DDX54-208ENST00000551344 SETD1AO15047 1707 aaKnown RBP27.81■■■□□ 2.04
DDX54-208ENST00000551344 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.81■■■□□ 2.04
DDX54-208ENST00000551344 DCCP43146 1447 aa27.81■■■□□ 2.04
DDX54-208ENST00000551344 PTCH1Q13635 1447 aa27.8■■■□□ 2.04
DDX54-208ENST00000551344 PRAG1Q86YV5 1406 aa27.8■■■□□ 2.04
DDX54-208ENST00000551344 IFT172Q9UG01 1749 aa27.8■■■□□ 2.04
DDX54-208ENST00000551344 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
DDX54-208ENST00000551344 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
DDX54-208ENST00000551344 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
DDX54-208ENST00000551344 C14orf93Q9H972 538 aaKnown RBP27.78■■■□□ 2.04
DDX54-208ENST00000551344 STAC3Q96MF2 364 aa27.77■■■□□ 2.04
DDX54-208ENST00000551344 ADGRL3Q9HAR2 1447 aa27.76■■■□□ 2.04
DDX54-208ENST00000551344 MYOM2P54296 1465 aa27.75■■■□□ 2.03
DDX54-208ENST00000551344 TMEM132EQ6IEE7 984 aa27.74■■■□□ 2.03
DDX54-208ENST00000551344 NRXN1Q9ULB1 1477 aa27.74■■■□□ 2.03
DDX54-208ENST00000551344 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
DDX54-208ENST00000551344 ABCC11Q96J66 1382 aa27.73■■■□□ 2.03
DDX54-208ENST00000551344 STK26Q9P289 416 aa27.72■■■□□ 2.03
DDX54-208ENST00000551344 CFAP70Q5T0N1 1121 aa27.71■■■□□ 2.03
DDX54-208ENST00000551344 DCAF11Q8TEB1 546 aa27.71■■■□□ 2.03
DDX54-208ENST00000551344 BRINP3Q76B58 766 aa27.69■■■□□ 2.02
DDX54-208ENST00000551344 TECPR2O15040 1411 aa27.68■■■□□ 2.02
DDX54-208ENST00000551344 MST1RQ04912 1400 aa27.68■■■□□ 2.02
DDX54-208ENST00000551344 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
DDX54-208ENST00000551344 KDM2AQ9Y2K7 1162 aa27.68■■■□□ 2.02
DDX54-208ENST00000551344 DHX57Q6P158 1386 aaKnown RBP27.66■■■□□ 2.02
DDX54-208ENST00000551344 YTHDC2Q9H6S0 1430 aaKnown RBP27.66■■■□□ 2.02
DDX54-208ENST00000551344 WAPLQ7Z5K2 1190 aa27.64■■■□□ 2.02
DDX54-208ENST00000551344 MED1Q15648 1581 aaPredicted RBP27.64■■■□□ 2.01
DDX54-208ENST00000551344 ASXL1Q8IXJ9 1541 aa27.63■■■□□ 2.01
DDX54-208ENST00000551344 NALCNQ8IZF0 1738 aa27.63■■■□□ 2.01
DDX54-208ENST00000551344 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
DDX54-208ENST00000551344 PHLPP1O60346 1717 aa27.61■■■□□ 2.01
DDX54-208ENST00000551344 JCADQ9P266 1359 aa27.6■■■□□ 2.01
DDX54-208ENST00000551344 LAMC1P11047 1609 aa27.59■■■□□ 2.01
DDX54-208ENST00000551344 AHDC1Q5TGY3 1603 aaPredicted RBP27.59■■■□□ 2.01
DDX54-208ENST00000551344 C1orf167Q5SNV9 1468 aa27.58■■■□□ 2.01
DDX54-208ENST00000551344 ILDR2Q71H61 639 aa27.58■■■□□ 2.01
DDX54-208ENST00000551344 PHF23Q9BUL5 403 aaPredicted RBP27.57■■■□□ 2
DDX54-208ENST00000551344 KNDC1Q76NI1 1749 aa27.56■■■□□ 2
DDX54-208ENST00000551344 PLEKHH1Q9ULM0 1364 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms