RNA–Protein interactions for RNA: ENST00000551068.7

TMEM235-204, Transcript of transmembrane protein 235, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMEM235, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-204ENST00000551068 ALKQ9UM73 1620 aa28.95■■■□□ 2.23
TMEM235-204ENST00000551068 HSPA1LP34931 641 aa28.95■■■□□ 2.22
TMEM235-204ENST00000551068 SLC26A8Q96RN1 970 aa28.95■■■□□ 2.22
TMEM235-204ENST00000551068 HFM1A2PYH4 1435 aa28.94■■■□□ 2.22
TMEM235-204ENST00000551068 PPP1R15AO75807 674 aaPredicted RBP28.94■■■□□ 2.22
TMEM235-204ENST00000551068 XIRP1Q702N8 1843 aaKnown RBP28.93■■■□□ 2.22
TMEM235-204ENST00000551068 NAIPQ13075 1403 aa28.92■■■□□ 2.22
TMEM235-204ENST00000551068 RIMS2Q9UQ26 1411 aa28.92■■■□□ 2.22
TMEM235-204ENST00000551068 ZFYVE9O95405 1425 aa28.89■■■□□ 2.22
TMEM235-204ENST00000551068 HDGFP51858 240 aaKnown RBP28.88■■■□□ 2.21
TMEM235-204ENST00000551068 KCNA6P17658 529 aa28.85■■■□□ 2.21
TMEM235-204ENST00000551068 SPHKAPQ2M3C7 1700 aa28.85■■■□□ 2.21
TMEM235-204ENST00000551068 PLEKHG1Q9ULL1 1385 aa28.85■■■□□ 2.21
TMEM235-204ENST00000551068 ILDR2Q71H61 639 aa28.83■■■□□ 2.21
TMEM235-204ENST00000551068 TRIM52Q96A61 297 aa28.83■■■□□ 2.21
TMEM235-204ENST00000551068 TMEM94Q12767 1356 aa28.83■■■□□ 2.21
TMEM235-204ENST00000551068 NUTM2DQ5VT03 806 aaPredicted RBP28.82■■■□□ 2.2
TMEM235-204ENST00000551068 PROSER2Q86WR7 435 aaPredicted RBP28.82■■■□□ 2.2
TMEM235-204ENST00000551068 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.82■■■□□ 2.2
TMEM235-204ENST00000551068 NWD1Q149M9 1564 aa28.82■■■□□ 2.2
TMEM235-204ENST00000551068 NKTRP30414 1462 aaKnown RBP28.8■■■□□ 2.2
TMEM235-204ENST00000551068 RBM33Q96EV2 1170 aaKnown RBP28.79■■■□□ 2.2
TMEM235-204ENST00000551068 CHD2O14647 1828 aaKnown RBP28.77■■■□□ 2.2
TMEM235-204ENST00000551068 MED1Q15648 1581 aaPredicted RBP28.76■■■□□ 2.19
TMEM235-204ENST00000551068 SETD5Q9C0A6 1442 aa28.73■■■□□ 2.19
TMEM235-204ENST00000551068 DIP2AQ14689 1571 aa28.71■■■□□ 2.19
TMEM235-204ENST00000551068 ZNF326Q5BKZ1 582 aaKnown RBP28.71■■■□□ 2.19
TMEM235-204ENST00000551068 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
TMEM235-204ENST00000551068 TBX22Q9Y458 520 aa28.69■■■□□ 2.18
TMEM235-204ENST00000551068 MSH6P52701 1360 aa28.69■■■□□ 2.18
TMEM235-204ENST00000551068 CLTCL1P53675 1640 aa28.69■■■□□ 2.18
TMEM235-204ENST00000551068 ADAMTS13Q76LX8 1427 aa28.69■■■□□ 2.18
TMEM235-204ENST00000551068 TRPM2O94759 1503 aa28.67■■■□□ 2.18
TMEM235-204ENST00000551068 ROBO1Q9Y6N7 1651 aa28.66■■■□□ 2.18
TMEM235-204ENST00000551068 KIF1BO60333 1816 aa28.65■■■□□ 2.18
TMEM235-204ENST00000551068 HRCP23327 699 aa28.65■■■□□ 2.18
TMEM235-204ENST00000551068 FAM135BQ49AJ0 1406 aa28.63■■■□□ 2.17
TMEM235-204ENST00000551068 C14orf37Q86TY3 774 aa28.63■■■□□ 2.17
TMEM235-204ENST00000551068 PHF23Q9BUL5 403 aaPredicted RBP28.62■■■□□ 2.17
TMEM235-204ENST00000551068 SOCS7O14512 581 aa28.61■■■□□ 2.17
TMEM235-204ENST00000551068 PIK3R4Q99570 1358 aa28.61■■■□□ 2.17
TMEM235-204ENST00000551068 NRXN3Q9Y4C0 1643 aa28.58■■■□□ 2.17
TMEM235-204ENST00000551068 RAB3GAP2Q9H2M9 1393 aa28.58■■■□□ 2.17
TMEM235-204ENST00000551068 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
TMEM235-204ENST00000551068 MPHOSPH9Q99550 1183 aa28.57■■■□□ 2.16
TMEM235-204ENST00000551068 NEXMIFQ5QGS0 1516 aa28.56■■■□□ 2.16
TMEM235-204ENST00000551068 AMOTL2Q9Y2J4 779 aa28.55■■■□□ 2.16
TMEM235-204ENST00000551068 SLAIN2Q9P270 581 aa28.54■■■□□ 2.16
TMEM235-204ENST00000551068 PTPRUQ92729 1446 aa28.53■■■□□ 2.16
TMEM235-204ENST00000551068 NCOA3Q9Y6Q9 1424 aa28.53■■■□□ 2.16
TMEM235-204ENST00000551068 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.52■■■□□ 2.16
TMEM235-204ENST00000551068 PHLPP1O60346 1717 aa28.51■■■□□ 2.15
TMEM235-204ENST00000551068 XRN1Q8IZH2 1706 aaKnown RBP28.5■■■□□ 2.15
TMEM235-204ENST00000551068 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
TMEM235-204ENST00000551068 ATF3P18847 181 aa28.48■■■□□ 2.15
TMEM235-204ENST00000551068 C19orf44Q9H6X5 657 aa28.46■■■□□ 2.15
TMEM235-204ENST00000551068 METP08581 1390 aa28.46■■■□□ 2.15
TMEM235-204ENST00000551068 FOXD1Q16676 465 aa28.45■■■□□ 2.14
TMEM235-204ENST00000551068 CADPS2Q86UW7 1296 aa28.45■■■□□ 2.14
TMEM235-204ENST00000551068 PPLO60437 1756 aa28.41■■■□□ 2.14
TMEM235-204ENST00000551068 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
TMEM235-204ENST00000551068 CCDC144AA2RUR9 1427 aa28.38■■■□□ 2.13
TMEM235-204ENST00000551068 RPGRIP1LQ68CZ1 1315 aa28.37■■■□□ 2.13
TMEM235-204ENST00000551068 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
TMEM235-204ENST00000551068 DCCP43146 1447 aa28.35■■■□□ 2.13
TMEM235-204ENST00000551068 SETD1AO15047 1707 aaKnown RBP28.35■■■□□ 2.13
TMEM235-204ENST00000551068 JCADQ9P266 1359 aa28.34■■■□□ 2.13
TMEM235-204ENST00000551068 NALCNQ8IZF0 1738 aa28.33■■■□□ 2.13
TMEM235-204ENST00000551068 AHDC1Q5TGY3 1603 aaPredicted RBP28.32■■■□□ 2.12
TMEM235-204ENST00000551068 ADGRL3Q9HAR2 1447 aa28.31■■■□□ 2.12
TMEM235-204ENST00000551068 RGL3Q3MIN7 710 aa28.29■■■□□ 2.12
TMEM235-204ENST00000551068 BRINP3Q76B58 766 aa28.28■■■□□ 2.12
TMEM235-204ENST00000551068 MST1RQ04912 1400 aa28.27■■■□□ 2.12
TMEM235-204ENST00000551068 RGS17Q9UGC6 210 aaPredicted RBP28.27■■■□□ 2.12
TMEM235-204ENST00000551068 ASXL1Q8IXJ9 1541 aa28.27■■■□□ 2.12
TMEM235-204ENST00000551068 PTCH1Q13635 1447 aa28.26■■■□□ 2.12
TMEM235-204ENST00000551068 IFT172Q9UG01 1749 aa28.25■■■□□ 2.11
TMEM235-204ENST00000551068 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
TMEM235-204ENST00000551068 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
TMEM235-204ENST00000551068 SPATA31E1Q6ZUB1 1445 aa28.23■■■□□ 2.11
TMEM235-204ENST00000551068 ADGRF5Q8IZF2 1346 aa28.21■■■□□ 2.11
TMEM235-204ENST00000551068 NHSL1Q5SYE7 1610 aa28.21■■■□□ 2.11
TMEM235-204ENST00000551068 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
TMEM235-204ENST00000551068 ANKRD30BQ9BXX2 1392 aa28.19■■■□□ 2.1
TMEM235-204ENST00000551068 SPATA31A6Q5VVP1 1343 aa28.18■■■□□ 2.1
TMEM235-204ENST00000551068 LRP6O75581 1613 aa28.17■■■□□ 2.1
TMEM235-204ENST00000551068 POTEAQ6S8J7 498 aa28.16■■■□□ 2.1
TMEM235-204ENST00000551068 PRAG1Q86YV5 1406 aa28.16■■■□□ 2.1
TMEM235-204ENST00000551068 C1orf167Q5SNV9 1468 aa28.14■■■□□ 2.09
TMEM235-204ENST00000551068 DDX17Q92841 729 aaKnown RBP28.13■■■□□ 2.09
TMEM235-204ENST00000551068 STAC3Q96MF2 364 aa28.13■■■□□ 2.09
TMEM235-204ENST00000551068 STK26Q9P289 416 aa28.13■■■□□ 2.09
TMEM235-204ENST00000551068 NUTM2BA6NNL0 878 aaPredicted RBP28.12■■■□□ 2.09
TMEM235-204ENST00000551068 NUTM2EB1AL46 878 aaPredicted RBP28.12■■■□□ 2.09
TMEM235-204ENST00000551068 NUTM2AQ8IVF1 878 aaPredicted RBP28.12■■■□□ 2.09
TMEM235-204ENST00000551068 PIK3C2GO75747 1445 aa28.1■■■□□ 2.09
TMEM235-204ENST00000551068 TMEM132EQ6IEE7 984 aa28.08■■■□□ 2.09
TMEM235-204ENST00000551068 LRRC59Q96AG4 307 aaKnown RBP28.08■■■□□ 2.09
TMEM235-204ENST00000551068 KNDC1Q76NI1 1749 aa28.07■■■□□ 2.08
TMEM235-204ENST00000551068 LRPPRCP42704 1394 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms