RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, human

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACS2-210	ENST00000550790	TMEM131L	A2VDJ0	1609 aa		32.55	■■■□□ 2.8
PACS2-210	ENST00000550790	HDGF	P51858	240 aa	Known RBP	32.54	■■■□□ 2.8
PACS2-210	ENST00000550790	PLEKHG1	Q9ULL1	1385 aa		32.54	■■■□□ 2.8
PACS2-210	ENST00000550790	RIMS2	Q9UQ26	1411 aa		32.53	■■■□□ 2.8
PACS2-210	ENST00000550790	IQGAP3	Q86VI3	1631 aa		32.53	■■■□□ 2.8
PACS2-210	ENST00000550790		E9PCH4	1651 aa		32.53	■■■□□ 2.8
PACS2-210	ENST00000550790	PROSER2	Q86WR7	435 aa	Predicted RBP	32.52	■■■□□ 2.8
PACS2-210	ENST00000550790	MED1	Q15648	1581 aa	Predicted RBP	32.5	■■■□□ 2.79
PACS2-210	ENST00000550790	BCAN	Q96GW7	911 aa		32.49	■■■□□ 2.79
PACS2-210	ENST00000550790	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
PACS2-210	ENST00000550790	RBM33	Q96EV2	1170 aa	Known RBP	32.48	■■■□□ 2.79
PACS2-210	ENST00000550790	TBX22	Q9Y458	520 aa		32.48	■■■□□ 2.79
PACS2-210	ENST00000550790	MYO5B	Q9ULV0	1848 aa		32.48	■■■□□ 2.79
PACS2-210	ENST00000550790	FAM135B	Q49AJ0	1406 aa		32.47	■■■□□ 2.79
PACS2-210	ENST00000550790	CHGA	P10645	457 aa	Known RBP	32.46	■■■□□ 2.79
PACS2-210	ENST00000550790	NWD1	Q149M9	1564 aa		32.45	■■■□□ 2.79
PACS2-210	ENST00000550790	PPP1R15A	O75807	674 aa	Predicted RBP	32.45	■■■□□ 2.79
PACS2-210	ENST00000550790	SENP3	Q9H4L4	574 aa	Predicted RBP	32.45	■■■□□ 2.79
PACS2-210	ENST00000550790	NKTR	P30414	1462 aa	Known RBP	32.44	■■■□□ 2.78
PACS2-210	ENST00000550790	RRBP1	Q9P2E9	1410 aa	Known RBP	32.43	■■■□□ 2.78
PACS2-210	ENST00000550790	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.39	■■■□□ 2.78
PACS2-210	ENST00000550790	ADAMTS13	Q76LX8	1427 aa		32.39	■■■□□ 2.78
PACS2-210	ENST00000550790	CHD2	O14647	1828 aa	Known RBP	32.36	■■■□□ 2.77
PACS2-210	ENST00000550790	NAIP	Q13075	1403 aa		32.32	■■■□□ 2.76
PACS2-210	ENST00000550790	MSH6	P52701	1360 aa		32.32	■■■□□ 2.76
PACS2-210	ENST00000550790	SLAIN2	Q9P270	581 aa		32.31	■■■□□ 2.76
PACS2-210	ENST00000550790	PIK3R4	Q99570	1358 aa		32.31	■■■□□ 2.76
PACS2-210	ENST00000550790	NCOA3	Q9Y6Q9	1424 aa		32.3	■■■□□ 2.76
PACS2-210	ENST00000550790	PHF23	Q9BUL5	403 aa	Predicted RBP	32.27	■■■□□ 2.76
PACS2-210	ENST00000550790	DIP2A	Q14689	1571 aa		32.26	■■■□□ 2.75
PACS2-210	ENST00000550790	ROBO1	Q9Y6N7	1651 aa		32.24	■■■□□ 2.75
PACS2-210	ENST00000550790	RGS17	Q9UGC6	210 aa	Predicted RBP	32.22	■■■□□ 2.75
PACS2-210	ENST00000550790	AMOTL2	Q9Y2J4	779 aa		32.22	■■■□□ 2.75
PACS2-210	ENST00000550790	PTPRU	Q92729	1446 aa		32.22	■■■□□ 2.75
PACS2-210	ENST00000550790	SPHKAP	Q2M3C7	1700 aa		32.22	■■■□□ 2.75
PACS2-210	ENST00000550790	C19orf44	Q9H6X5	657 aa		32.19	■■■□□ 2.74
PACS2-210	ENST00000550790	HFM1	A2PYH4	1435 aa		32.17	■■■□□ 2.74
PACS2-210	ENST00000550790	ZNF326	Q5BKZ1	582 aa	Known RBP	32.17	■■■□□ 2.74
PACS2-210	ENST00000550790	TRPM2	O94759	1503 aa		32.16	■■■□□ 2.74
PACS2-210	ENST00000550790	SETBP1	Q9Y6X0	1596 aa		32.14	■■■□□ 2.74
PACS2-210	ENST00000550790	NRXN3	Q9Y4C0	1643 aa		32.14	■■■□□ 2.74
PACS2-210	ENST00000550790	CADPS2	Q86UW7	1296 aa		32.13	■■■□□ 2.73
PACS2-210	ENST00000550790	CLTCL1	P53675	1640 aa		32.12	■■■□□ 2.73
PACS2-210	ENST00000550790	C14orf37	Q86TY3	774 aa		32.12	■■■□□ 2.73
PACS2-210	ENST00000550790	MET	P08581	1390 aa		32.1	■■■□□ 2.73
PACS2-210	ENST00000550790	TRIM52	Q96A61	297 aa		32.1	■■■□□ 2.73
PACS2-210	ENST00000550790	ATF3	P18847	181 aa		32.09	■■■□□ 2.73
PACS2-210	ENST00000550790	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.08	■■■□□ 2.73
PACS2-210	ENST00000550790	NEXMIF	Q5QGS0	1516 aa		32.07	■■■□□ 2.72
PACS2-210	ENST00000550790	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.05	■■■□□ 2.72
PACS2-210	ENST00000550790	JCAD	Q9P266	1359 aa		32.04	■■■□□ 2.72
PACS2-210	ENST00000550790	XRN1	Q8IZH2	1706 aa	Known RBP	32.03	■■■□□ 2.72
PACS2-210	ENST00000550790	PHLPP1	O60346	1717 aa		32.03	■■■□□ 2.72
PACS2-210	ENST00000550790	DCC	P43146	1447 aa		32	■■■□□ 2.71
PACS2-210	ENST00000550790	VGF	O15240	615 aa	Predicted RBP	31.99	■■■□□ 2.71
PACS2-210	ENST00000550790	POTEA	Q6S8J7	498 aa		31.99	■■■□□ 2.71
PACS2-210	ENST00000550790	BRINP3	Q76B58	766 aa		31.99	■■■□□ 2.71
PACS2-210	ENST00000550790	COL16A1	Q07092	1604 aa	Predicted RBP	31.98	■■■□□ 2.71
PACS2-210	ENST00000550790	RPGRIP1L	Q68CZ1	1315 aa		31.98	■■■□□ 2.71
PACS2-210	ENST00000550790	KIF1B	O60333	1816 aa		31.97	■■■□□ 2.71
PACS2-210	ENST00000550790	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.94	■■■□□ 2.7
PACS2-210	ENST00000550790	FOXD1	Q16676	465 aa		31.92	■■■□□ 2.7
PACS2-210	ENST00000550790	MST1R	Q04912	1400 aa		31.91	■■■□□ 2.7
PACS2-210	ENST00000550790	SPATA31A6	Q5VVP1	1343 aa		31.9	■■■□□ 2.7
PACS2-210	ENST00000550790	ADGRL3	Q9HAR2	1447 aa		31.88	■■■□□ 2.69
PACS2-210	ENST00000550790	MPHOSPH9	Q99550	1183 aa		31.86	■■■□□ 2.69
PACS2-210	ENST00000550790	LRP6	O75581	1613 aa		31.83	■■■□□ 2.69
PACS2-210	ENST00000550790	ASXL1	Q8IXJ9	1541 aa		31.83	■■■□□ 2.69
PACS2-210	ENST00000550790	SETD1A	O15047	1707 aa	Known RBP	31.83	■■■□□ 2.69
PACS2-210	ENST00000550790	PRAG1	Q86YV5	1406 aa		31.83	■■■□□ 2.69
PACS2-210	ENST00000550790	ROBO2	Q9HCK4	1378 aa		31.82	■■■□□ 2.69
PACS2-210	ENST00000550790	PTCH1	Q13635	1447 aa		31.82	■■■□□ 2.68
PACS2-210	ENST00000550790	SETD5	Q9C0A6	1442 aa		31.8	■■■□□ 2.68
PACS2-210	ENST00000550790	SHPRH	Q149N8	1683 aa		31.78	■■■□□ 2.68
PACS2-210	ENST00000550790	PPL	O60437	1756 aa		31.78	■■■□□ 2.68
PACS2-210	ENST00000550790	SPATA31E1	Q6ZUB1	1445 aa		31.77	■■■□□ 2.68
PACS2-210	ENST00000550790	ADGRF5	Q8IZF2	1346 aa		31.76	■■■□□ 2.68
PACS2-210	ENST00000550790	CCDC144A	A2RUR9	1427 aa		31.76	■■■□□ 2.68
PACS2-210	ENST00000550790	NALCN	Q8IZF0	1738 aa		31.76	■■■□□ 2.67
PACS2-210	ENST00000550790	DDX17	Q92841	729 aa	Known RBP	31.75	■■■□□ 2.67
PACS2-210	ENST00000550790	LRRC59	Q96AG4	307 aa	Known RBP	31.75	■■■□□ 2.67
PACS2-210	ENST00000550790	C1orf167	Q5SNV9	1468 aa		31.74	■■■□□ 2.67
PACS2-210	ENST00000550790	RGL3	Q3MIN7	710 aa		31.74	■■■□□ 2.67
PACS2-210	ENST00000550790	NHSL1	Q5SYE7	1610 aa		31.73	■■■□□ 2.67
PACS2-210	ENST00000550790	MEX3C	Q5U5Q3	659 aa	Known RBP	31.71	■■■□□ 2.67
PACS2-210	ENST00000550790	ACIN1	Q9UKV3	1341 aa	Known RBP	31.71	■■■□□ 2.67
PACS2-210	ENST00000550790	ANKRD30B	Q9BXX2	1392 aa		31.69	■■■□□ 2.66
PACS2-210	ENST00000550790	ZNF772	Q68DY9	489 aa	Predicted RBP	31.69	■■■□□ 2.66
PACS2-210	ENST00000550790	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.68	■■■□□ 2.66
PACS2-210	ENST00000550790	NUTM2E	B1AL46	878 aa	Predicted RBP	31.68	■■■□□ 2.66
PACS2-210	ENST00000550790	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.68	■■■□□ 2.66
PACS2-210	ENST00000550790	ORAI2	Q96SN7	254 aa		31.68	■■■□□ 2.66
PACS2-210	ENST00000550790	PNPLA6	Q8IY17	1366 aa		31.64	■■■□□ 2.66
PACS2-210	ENST00000550790	LAMC1	P11047	1609 aa		31.62	■■■□□ 2.65
PACS2-210	ENST00000550790	SOS2	Q07890	1332 aa	Predicted RBP	31.62	■■■□□ 2.65
PACS2-210	ENST00000550790	TECPR2	O15040	1411 aa		31.6	■■■□□ 2.65
PACS2-210	ENST00000550790	LRPPRC	P42704	1394 aa	Known RBP	31.6	■■■□□ 2.65
PACS2-210	ENST00000550790	ABCC11	Q96J66	1382 aa		31.6	■■■□□ 2.65
PACS2-210	ENST00000550790	TMEM132E	Q6IEE7	984 aa		31.59	■■■□□ 2.65
PACS2-210	ENST00000550790	WAPL	Q7Z5K2	1190 aa		31.59	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms