RNA–Protein interactions for RNA: ENST00000550762.1

PMEL-217, Transcript of premelanosome protein, humanhuman

TSL 1 (best)

Gene PMEL, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-217ENST00000550762 SLC26A8Q96RN1 970 aa19.58■□□□□ 0.72
PMEL-217ENST00000550762 KCNA6P17658 529 aa19.57■□□□□ 0.72
PMEL-217ENST00000550762 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
PMEL-217ENST00000550762 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
PMEL-217ENST00000550762 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
PMEL-217ENST00000550762 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
PMEL-217ENST00000550762 DISP3Q9P2K9 1392 aa19.52■□□□□ 0.72
PMEL-217ENST00000550762 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
PMEL-217ENST00000550762 HSPA1LP34931 641 aa19.5■□□□□ 0.71
PMEL-217ENST00000550762 PROSER2Q86WR7 435 aaPredicted RBP19.5■□□□□ 0.71
PMEL-217ENST00000550762 TBX22Q9Y458 520 aa19.5■□□□□ 0.71
PMEL-217ENST00000550762 NKTRP30414 1462 aaKnown RBP19.49■□□□□ 0.71
PMEL-217ENST00000550762 TMEM94Q12767 1356 aa19.49■□□□□ 0.71
PMEL-217ENST00000550762 MYO5BQ9ULV0 1848 aa19.48■□□□□ 0.71
PMEL-217ENST00000550762 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
PMEL-217ENST00000550762 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
PMEL-217ENST00000550762 NWD1Q149M9 1564 aa19.47■□□□□ 0.71
PMEL-217ENST00000550762 SPHKAPQ2M3C7 1700 aa19.47■□□□□ 0.71
PMEL-217ENST00000550762 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
PMEL-217ENST00000550762 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
PMEL-217ENST00000550762 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
PMEL-217ENST00000550762 TRPM2O94759 1503 aa19.45■□□□□ 0.7
PMEL-217ENST00000550762 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
PMEL-217ENST00000550762 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
PMEL-217ENST00000550762 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
PMEL-217ENST00000550762 MSH6P52701 1360 aa19.41■□□□□ 0.7
PMEL-217ENST00000550762 XIRP1Q702N8 1843 aaKnown RBP19.4■□□□□ 0.7
PMEL-217ENST00000550762 RBM33Q96EV2 1170 aaKnown RBP19.4■□□□□ 0.7
PMEL-217ENST00000550762 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
PMEL-217ENST00000550762 FAM135BQ49AJ0 1406 aa19.39■□□□□ 0.69
PMEL-217ENST00000550762 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
PMEL-217ENST00000550762 CLTCL1P53675 1640 aa19.39■□□□□ 0.69
PMEL-217ENST00000550762 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
PMEL-217ENST00000550762 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
PMEL-217ENST00000550762 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
PMEL-217ENST00000550762 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
PMEL-217ENST00000550762 RPGRIP1LQ68CZ1 1315 aa19.33■□□□□ 0.69
PMEL-217ENST00000550762 VGFO15240 615 aaPredicted RBP19.33■□□□□ 0.68
PMEL-217ENST00000550762 NEXMIFQ5QGS0 1516 aa19.33■□□□□ 0.68
PMEL-217ENST00000550762 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
PMEL-217ENST00000550762 SLAIN2Q9P270 581 aa19.32■□□□□ 0.68
PMEL-217ENST00000550762 KIF1BO60333 1816 aa19.32■□□□□ 0.68
PMEL-217ENST00000550762 ILDR2Q71H61 639 aa19.31■□□□□ 0.68
PMEL-217ENST00000550762 C19orf44Q9H6X5 657 aa19.31■□□□□ 0.68
PMEL-217ENST00000550762 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
PMEL-217ENST00000550762 NRXN3Q9Y4C0 1643 aa19.3■□□□□ 0.68
PMEL-217ENST00000550762 CADPS2Q86UW7 1296 aa19.3■□□□□ 0.68
PMEL-217ENST00000550762 SETD5Q9C0A6 1442 aa19.3■□□□□ 0.68
PMEL-217ENST00000550762 MED1Q15648 1581 aaPredicted RBP19.3■□□□□ 0.68
PMEL-217ENST00000550762 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
PMEL-217ENST00000550762 FOXD1Q16676 465 aa19.29■□□□□ 0.68
PMEL-217ENST00000550762 ATF3P18847 181 aa19.28■□□□□ 0.68
PMEL-217ENST00000550762 METP08581 1390 aa19.28■□□□□ 0.68
PMEL-217ENST00000550762 ROBO1Q9Y6N7 1651 aa19.26■□□□□ 0.67
PMEL-217ENST00000550762 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
PMEL-217ENST00000550762 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
PMEL-217ENST00000550762 DCCP43146 1447 aa19.24■□□□□ 0.67
PMEL-217ENST00000550762 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
PMEL-217ENST00000550762 SOCS7O14512 581 aa19.21■□□□□ 0.67
PMEL-217ENST00000550762 ANKRD30BQ9BXX2 1392 aa19.2■□□□□ 0.66
PMEL-217ENST00000550762 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
PMEL-217ENST00000550762 SPATA31E1Q6ZUB1 1445 aa19.2■□□□□ 0.66
PMEL-217ENST00000550762 RGL3Q3MIN7 710 aa19.2■□□□□ 0.66
PMEL-217ENST00000550762 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
PMEL-217ENST00000550762 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
PMEL-217ENST00000550762 PPLO60437 1756 aa19.17■□□□□ 0.66
PMEL-217ENST00000550762 JCADQ9P266 1359 aa19.16■□□□□ 0.66
PMEL-217ENST00000550762 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
PMEL-217ENST00000550762 ADGRF5Q8IZF2 1346 aa19.15■□□□□ 0.66
PMEL-217ENST00000550762 PHLPP1O60346 1717 aa19.14■□□□□ 0.66
PMEL-217ENST00000550762 HRCP23327 699 aa19.14■□□□□ 0.65
PMEL-217ENST00000550762 BRINP3Q76B58 766 aa19.14■□□□□ 0.65
PMEL-217ENST00000550762 ROBO2Q9HCK4 1378 aa19.13■□□□□ 0.65
PMEL-217ENST00000550762 MST1RQ04912 1400 aa19.13■□□□□ 0.65
PMEL-217ENST00000550762 SETD1AO15047 1707 aaKnown RBP19.13■□□□□ 0.65
PMEL-217ENST00000550762 AHDC1Q5TGY3 1603 aaPredicted RBP19.12■□□□□ 0.65
PMEL-217ENST00000550762 COL16A1Q07092 1604 aaPredicted RBP19.1■□□□□ 0.65
PMEL-217ENST00000550762 ASXL1Q8IXJ9 1541 aa19.09■□□□□ 0.65
PMEL-217ENST00000550762 PIK3C2GO75747 1445 aa19.08■□□□□ 0.65
PMEL-217ENST00000550762 SPATA31A6Q5VVP1 1343 aa19.08■□□□□ 0.65
PMEL-217ENST00000550762 NALCNQ8IZF0 1738 aa19.07■□□□□ 0.64
PMEL-217ENST00000550762 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
PMEL-217ENST00000550762 IFT172Q9UG01 1749 aa19.06■□□□□ 0.64
PMEL-217ENST00000550762 TECPR2O15040 1411 aa19.06■□□□□ 0.64
PMEL-217ENST00000550762 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
PMEL-217ENST00000550762 MYOM2P54296 1465 aa19.05■□□□□ 0.64
PMEL-217ENST00000550762 STK26Q9P289 416 aa19.05■□□□□ 0.64
PMEL-217ENST00000550762 RGS17Q9UGC6 210 aaPredicted RBP19.05■□□□□ 0.64
PMEL-217ENST00000550762 C1orf167Q5SNV9 1468 aa19.04■□□□□ 0.64
PMEL-217ENST00000550762 C14orf93Q9H972 538 aaKnown RBP19.04■□□□□ 0.64
PMEL-217ENST00000550762 TMEM132EQ6IEE7 984 aa19.03■□□□□ 0.64
PMEL-217ENST00000550762 LRRC59Q96AG4 307 aaKnown RBP19.03■□□□□ 0.64
PMEL-217ENST00000550762 NRXN1Q9ULB1 1477 aa19.03■□□□□ 0.64
PMEL-217ENST00000550762 YTHDC2Q9H6S0 1430 aaKnown RBP19.01■□□□□ 0.63
PMEL-217ENST00000550762 MEX3CQ5U5Q3 659 aaKnown RBP19■□□□□ 0.63
PMEL-217ENST00000550762 SIRT1Q96EB6 747 aa19■□□□□ 0.63
PMEL-217ENST00000550762 STAC3Q96MF2 364 aa19■□□□□ 0.63
PMEL-217ENST00000550762 DHX57Q6P158 1386 aaKnown RBP19■□□□□ 0.63
PMEL-217ENST00000550762 NHSL1Q5SYE7 1610 aa19■□□□□ 0.63
PMEL-217ENST00000550762 SHPRHQ149N8 1683 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms