RNA–Protein interactions for RNA: ENST00000550651.5

RACGAP1-220, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-220ENST00000550651 ROBO1Q9Y6N7 1651 aa25.17■■□□□ 1.62
RACGAP1-220ENST00000550651 ANKRD50Q9ULJ7 1429 aa25.15■■□□□ 1.62
RACGAP1-220ENST00000550651 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
RACGAP1-220ENST00000550651 BCANQ96GW7 911 aa25.13■■□□□ 1.61
RACGAP1-220ENST00000550651 FAM50AQ14320 339 aaKnown RBP25.12■■□□□ 1.61
RACGAP1-220ENST00000550651 MSH6P52701 1360 aa25.1■■□□□ 1.61
RACGAP1-220ENST00000550651 PLEKHG1Q9ULL1 1385 aa25.1■■□□□ 1.61
RACGAP1-220ENST00000550651 RIMS2Q9UQ26 1411 aa25.08■■□□□ 1.61
RACGAP1-220ENST00000550651 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
RACGAP1-220ENST00000550651 GCC2Q8IWJ2 1684 aa25.07■■□□□ 1.6
RACGAP1-220ENST00000550651 HDGFP51858 240 aaKnown RBP25.07■■□□□ 1.6
RACGAP1-220ENST00000550651 SLAIN2Q9P270 581 aa25.07■■□□□ 1.6
RACGAP1-220ENST00000550651 TMEM131LA2VDJ0 1609 aa25.07■■□□□ 1.6
RACGAP1-220ENST00000550651 CHD2O14647 1828 aaKnown RBP25.07■■□□□ 1.6
RACGAP1-220ENST00000550651 POTEAQ6S8J7 498 aa25.06■■□□□ 1.6
RACGAP1-220ENST00000550651 PPP1R15AO75807 674 aaPredicted RBP25.05■■□□□ 1.6
RACGAP1-220ENST00000550651 UNC13BO14795 1591 aa25.04■■□□□ 1.6
RACGAP1-220ENST00000550651 TBX22Q9Y458 520 aa25.03■■□□□ 1.6
RACGAP1-220ENST00000550651 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.01■■□□□ 1.59
RACGAP1-220ENST00000550651 PHLPP1O60346 1717 aa25■■□□□ 1.59
RACGAP1-220ENST00000550651 NCOA3Q9Y6Q9 1424 aa25■■□□□ 1.59
RACGAP1-220ENST00000550651 JCADQ9P266 1359 aa24.99■■□□□ 1.59
RACGAP1-220ENST00000550651 E9PCH4 1651 aa24.98■■□□□ 1.59
RACGAP1-220ENST00000550651 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
RACGAP1-220ENST00000550651 CHGAP10645 457 aaKnown RBP24.97■■□□□ 1.59
RACGAP1-220ENST00000550651 ROCK1Q13464 1354 aa24.95■■□□□ 1.59
RACGAP1-220ENST00000550651 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
RACGAP1-220ENST00000550651 NUTM2DQ5VT03 806 aaPredicted RBP24.94■■□□□ 1.58
RACGAP1-220ENST00000550651 COL16A1Q07092 1604 aaPredicted RBP24.94■■□□□ 1.58
RACGAP1-220ENST00000550651 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
RACGAP1-220ENST00000550651 DIP2AQ14689 1571 aa24.93■■□□□ 1.58
RACGAP1-220ENST00000550651 C14orf37Q86TY3 774 aa24.91■■□□□ 1.58
RACGAP1-220ENST00000550651 C19orf44Q9H6X5 657 aa24.91■■□□□ 1.58
RACGAP1-220ENST00000550651 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.89■■□□□ 1.58
RACGAP1-220ENST00000550651 CADPS2Q86UW7 1296 aa24.89■■□□□ 1.58
RACGAP1-220ENST00000550651 NUP155O75694 1391 aa24.88■■□□□ 1.57
RACGAP1-220ENST00000550651 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
RACGAP1-220ENST00000550651 ATF3P18847 181 aa24.86■■□□□ 1.57
RACGAP1-220ENST00000550651 AHDC1Q5TGY3 1603 aaPredicted RBP24.86■■□□□ 1.57
RACGAP1-220ENST00000550651 TRPM2O94759 1503 aa24.86■■□□□ 1.57
RACGAP1-220ENST00000550651 AMOTL2Q9Y2J4 779 aa24.85■■□□□ 1.57
RACGAP1-220ENST00000550651 LRP6O75581 1613 aa24.85■■□□□ 1.57
RACGAP1-220ENST00000550651 PTPRUQ92729 1446 aa24.85■■□□□ 1.57
RACGAP1-220ENST00000550651 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
RACGAP1-220ENST00000550651 SHPRHQ149N8 1683 aa24.8■■□□□ 1.56
RACGAP1-220ENST00000550651 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
RACGAP1-220ENST00000550651 ITGAEP38570 1179 aa24.78■■□□□ 1.56
RACGAP1-220ENST00000550651 MEX3CQ5U5Q3 659 aaKnown RBP24.78■■□□□ 1.56
RACGAP1-220ENST00000550651 ZNF772Q68DY9 489 aaPredicted RBP24.78■■□□□ 1.56
RACGAP1-220ENST00000550651 NRXN3Q9Y4C0 1643 aa24.78■■□□□ 1.56
RACGAP1-220ENST00000550651 DCCP43146 1447 aa24.78■■□□□ 1.56
RACGAP1-220ENST00000550651 SETBP1Q9Y6X0 1596 aa24.77■■□□□ 1.56
RACGAP1-220ENST00000550651 XRN1Q8IZH2 1706 aaKnown RBP24.76■■□□□ 1.55
RACGAP1-220ENST00000550651 SPHKAPQ2M3C7 1700 aa24.75■■□□□ 1.55
RACGAP1-220ENST00000550651 ASXL1Q8IXJ9 1541 aa24.71■■□□□ 1.55
RACGAP1-220ENST00000550651 ZNF326Q5BKZ1 582 aaKnown RBP24.71■■□□□ 1.55
RACGAP1-220ENST00000550651 MST1RQ04912 1400 aa24.7■■□□□ 1.55
RACGAP1-220ENST00000550651 METP08581 1390 aa24.7■■□□□ 1.55
RACGAP1-220ENST00000550651 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
RACGAP1-220ENST00000550651 TRIM52Q96A61 297 aa24.68■■□□□ 1.54
RACGAP1-220ENST00000550651 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
RACGAP1-220ENST00000550651 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
RACGAP1-220ENST00000550651 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
RACGAP1-220ENST00000550651 NHSL1Q5SYE7 1610 aa24.67■■□□□ 1.54
RACGAP1-220ENST00000550651 RXRBP28702 533 aa24.66■■□□□ 1.54
RACGAP1-220ENST00000550651 UPF1Q92900 1129 aaKnown RBP eCLIP24.66■■□□□ 1.54
RACGAP1-220ENST00000550651 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
RACGAP1-220ENST00000550651 NEXMIFQ5QGS0 1516 aa24.65■■□□□ 1.54
RACGAP1-220ENST00000550651 ADGRL3Q9HAR2 1447 aa24.64■■□□□ 1.54
RACGAP1-220ENST00000550651 CLTCL1P53675 1640 aa24.64■■□□□ 1.53
RACGAP1-220ENST00000550651 LRRC59Q96AG4 307 aaKnown RBP24.63■■□□□ 1.53
RACGAP1-220ENST00000550651 CDK12Q9NYV4 1490 aaPredicted RBP24.61■■□□□ 1.53
RACGAP1-220ENST00000550651 AFF2P51816 1311 aa24.61■■□□□ 1.53
RACGAP1-220ENST00000550651 NALCNQ8IZF0 1738 aa24.6■■□□□ 1.53
RACGAP1-220ENST00000550651 DDX17Q92841 729 aaKnown RBP24.58■■□□□ 1.53
RACGAP1-220ENST00000550651 PNPLA6Q8IY17 1366 aa24.57■■□□□ 1.52
RACGAP1-220ENST00000550651 KIF1BO60333 1816 aa24.56■■□□□ 1.52
RACGAP1-220ENST00000550651 NAIPQ13075 1403 aa24.55■■□□□ 1.52
RACGAP1-220ENST00000550651 PTCH1Q13635 1447 aa24.53■■□□□ 1.52
RACGAP1-220ENST00000550651 C1orf167Q5SNV9 1468 aa24.53■■□□□ 1.52
RACGAP1-220ENST00000550651 C8orf37Q96NL8 207 aa24.53■■□□□ 1.52
RACGAP1-220ENST00000550651 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
RACGAP1-220ENST00000550651 VGFO15240 615 aaPredicted RBP24.52■■□□□ 1.52
RACGAP1-220ENST00000550651 LAMC1P11047 1609 aa24.51■■□□□ 1.51
RACGAP1-220ENST00000550651 ROBO2Q9HCK4 1378 aa24.51■■□□□ 1.51
RACGAP1-220ENST00000550651 QTRT2Q9H974 415 aaKnown RBP24.5■■□□□ 1.51
RACGAP1-220ENST00000550651 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
RACGAP1-220ENST00000550651 RGS12O14924 1447 aa24.48■■□□□ 1.51
RACGAP1-220ENST00000550651 PRAG1Q86YV5 1406 aa24.48■■□□□ 1.51
RACGAP1-220ENST00000550651 SOS2Q07890 1332 aaPredicted RBP24.47■■□□□ 1.51
RACGAP1-220ENST00000550651 RPGRIP1LQ68CZ1 1315 aa24.47■■□□□ 1.51
RACGAP1-220ENST00000550651 ORAI2Q96SN7 254 aa24.47■■□□□ 1.51
RACGAP1-220ENST00000550651 ADAMTS2O95450 1211 aa24.45■■□□□ 1.5
RACGAP1-220ENST00000550651 NGLY1Q96IV0 654 aa24.45■■□□□ 1.5
RACGAP1-220ENST00000550651 HFM1A2PYH4 1435 aa24.43■■□□□ 1.5
RACGAP1-220ENST00000550651 SLC4A1APQ9BWU0 796 aaKnown RBP24.41■■□□□ 1.5
RACGAP1-220ENST00000550651 PPLO60437 1756 aa24.41■■□□□ 1.5
RACGAP1-220ENST00000550651 USP21Q9UK80 565 aa24.37■■□□□ 1.49
RACGAP1-220ENST00000550651 COL22A1Q8NFW1 1626 aaPredicted RBP24.36■■□□□ 1.49
RACGAP1-220ENST00000550651 FNBP4Q8N3X1 1017 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 351.3 ms