RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
TPCN1-213ENST00000550543 TET3O43151 1660 aa21.84■■□□□ 1.09
TPCN1-213ENST00000550543 PLEKHG1Q9ULL1 1385 aa21.83■■□□□ 1.08
TPCN1-213ENST00000550543 MSH6P52701 1360 aa21.82■■□□□ 1.08
TPCN1-213ENST00000550543 NWD1Q149M9 1564 aa21.79■■□□□ 1.08
TPCN1-213ENST00000550543 ZFYVE9O95405 1425 aa21.79■■□□□ 1.08
TPCN1-213ENST00000550543 RIMS2Q9UQ26 1411 aa21.79■■□□□ 1.08
TPCN1-213ENST00000550543 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
TPCN1-213ENST00000550543 TBX22Q9Y458 520 aa21.78■■□□□ 1.08
TPCN1-213ENST00000550543 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
TPCN1-213ENST00000550543 UNC13BO14795 1591 aa21.78■■□□□ 1.08
TPCN1-213ENST00000550543 GCC2Q8IWJ2 1684 aa21.77■■□□□ 1.08
TPCN1-213ENST00000550543 PIK3R4Q99570 1358 aa21.74■■□□□ 1.07
TPCN1-213ENST00000550543 XIRP1Q702N8 1843 aaKnown RBP21.74■■□□□ 1.07
TPCN1-213ENST00000550543 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
TPCN1-213ENST00000550543 TMEM131LA2VDJ0 1609 aa21.72■■□□□ 1.07
TPCN1-213ENST00000550543 NUP155O75694 1391 aa21.72■■□□□ 1.07
TPCN1-213ENST00000550543 DIP2AQ14689 1571 aa21.71■■□□□ 1.07
TPCN1-213ENST00000550543 SLAIN2Q9P270 581 aa21.71■■□□□ 1.07
TPCN1-213ENST00000550543 IQGAP3Q86VI3 1631 aa21.7■■□□□ 1.06
TPCN1-213ENST00000550543 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
TPCN1-213ENST00000550543 ROBO1Q9Y6N7 1651 aa21.67■■□□□ 1.06
TPCN1-213ENST00000550543 CADPS2Q86UW7 1296 aa21.67■■□□□ 1.06
TPCN1-213ENST00000550543 JCADQ9P266 1359 aa21.65■■□□□ 1.06
TPCN1-213ENST00000550543 C19orf44Q9H6X5 657 aa21.65■■□□□ 1.06
TPCN1-213ENST00000550543 E9PCH4 1651 aa21.64■■□□□ 1.05
TPCN1-213ENST00000550543 ATF3P18847 181 aa21.64■■□□□ 1.05
TPCN1-213ENST00000550543 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.05
TPCN1-213ENST00000550543 CHD2O14647 1828 aaKnown RBP21.64■■□□□ 1.05
TPCN1-213ENST00000550543 TRPM2O94759 1503 aa21.62■■□□□ 1.05
TPCN1-213ENST00000550543 ITGAEP38570 1179 aa21.62■■□□□ 1.05
TPCN1-213ENST00000550543 ADAMTS13Q76LX8 1427 aa21.62■■□□□ 1.05
TPCN1-213ENST00000550543 MYO5BQ9ULV0 1848 aa21.59■■□□□ 1.05
TPCN1-213ENST00000550543 RGS17Q9UGC6 210 aaPredicted RBP21.59■■□□□ 1.05
TPCN1-213ENST00000550543 SPATA31A6Q5VVP1 1343 aa21.57■■□□□ 1.04
TPCN1-213ENST00000550543 DCCP43146 1447 aa21.57■■□□□ 1.04
TPCN1-213ENST00000550543 ZNF326Q5BKZ1 582 aaKnown RBP21.56■■□□□ 1.04
TPCN1-213ENST00000550543 AMOTL2Q9Y2J4 779 aa21.56■■□□□ 1.04
TPCN1-213ENST00000550543 PHLPP1O60346 1717 aa21.55■■□□□ 1.04
TPCN1-213ENST00000550543 NUTM2DQ5VT03 806 aaPredicted RBP21.55■■□□□ 1.04
TPCN1-213ENST00000550543 SETBP1Q9Y6X0 1596 aa21.52■■□□□ 1.04
TPCN1-213ENST00000550543 MEX3CQ5U5Q3 659 aaKnown RBP21.5■■□□□ 1.03
TPCN1-213ENST00000550543 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
TPCN1-213ENST00000550543 SPHKAPQ2M3C7 1700 aa21.49■■□□□ 1.03
TPCN1-213ENST00000550543 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
TPCN1-213ENST00000550543 ZNF772Q68DY9 489 aaPredicted RBP21.49■■□□□ 1.03
TPCN1-213ENST00000550543 POTEAQ6S8J7 498 aa21.49■■□□□ 1.03
TPCN1-213ENST00000550543 COL16A1Q07092 1604 aaPredicted RBP21.48■■□□□ 1.03
TPCN1-213ENST00000550543 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.47■■□□□ 1.03
TPCN1-213ENST00000550543 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
TPCN1-213ENST00000550543 VGFO15240 615 aaPredicted RBP21.45■■□□□ 1.02
TPCN1-213ENST00000550543 BRINP3Q76B58 766 aa21.44■■□□□ 1.02
TPCN1-213ENST00000550543 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
TPCN1-213ENST00000550543 RPGRIP1LQ68CZ1 1315 aa21.43■■□□□ 1.02
TPCN1-213ENST00000550543 NAIPQ13075 1403 aa21.43■■□□□ 1.02
TPCN1-213ENST00000550543 XRN1Q8IZH2 1706 aaKnown RBP21.43■■□□□ 1.02
TPCN1-213ENST00000550543 ADGRL3Q9HAR2 1447 aa21.41■■□□□ 1.02
TPCN1-213ENST00000550543 LRRC59Q96AG4 307 aaKnown RBP21.41■■□□□ 1.02
TPCN1-213ENST00000550543 METP08581 1390 aa21.4■■□□□ 1.02
TPCN1-213ENST00000550543 TRIM52Q96A61 297 aa21.4■■□□□ 1.02
TPCN1-213ENST00000550543 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
TPCN1-213ENST00000550543 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
TPCN1-213ENST00000550543 HFM1A2PYH4 1435 aa21.39■■□□□ 1.02
TPCN1-213ENST00000550543 NEXMIFQ5QGS0 1516 aa21.39■■□□□ 1.01
TPCN1-213ENST00000550543 SETD5Q9C0A6 1442 aa21.38■■□□□ 1.01
TPCN1-213ENST00000550543 ASXL1Q8IXJ9 1541 aa21.38■■□□□ 1.01
TPCN1-213ENST00000550543 MST1RQ04912 1400 aa21.38■■□□□ 1.01
TPCN1-213ENST00000550543 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
TPCN1-213ENST00000550543 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
TPCN1-213ENST00000550543 PTCH1Q13635 1447 aa21.37■■□□□ 1.01
TPCN1-213ENST00000550543 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
TPCN1-213ENST00000550543 KIF1BO60333 1816 aa21.35■■□□□ 1.01
TPCN1-213ENST00000550543 LRP6O75581 1613 aa21.35■■□□□ 1.01
TPCN1-213ENST00000550543 PRAG1Q86YV5 1406 aa21.33■■□□□ 1.01
TPCN1-213ENST00000550543 RXRBP28702 533 aa21.33■■□□□ 1.01
TPCN1-213ENST00000550543 NUTM2BA6NNL0 878 aaPredicted RBP21.31■■□□□ 1
TPCN1-213ENST00000550543 NUTM2EB1AL46 878 aaPredicted RBP21.31■■□□□ 1
TPCN1-213ENST00000550543 NUTM2AQ8IVF1 878 aaPredicted RBP21.31■■□□□ 1
TPCN1-213ENST00000550543 CDK12Q9NYV4 1490 aaPredicted RBP21.3■■□□□ 1
TPCN1-213ENST00000550543 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
TPCN1-213ENST00000550543 C1orf167Q5SNV9 1468 aa21.26■□□□□ 0.99
TPCN1-213ENST00000550543 AFF2P51816 1311 aa21.26■□□□□ 0.99
TPCN1-213ENST00000550543 CCDC144AA2RUR9 1427 aa21.25■□□□□ 0.99
TPCN1-213ENST00000550543 PNPLA6Q8IY17 1366 aa21.24■□□□□ 0.99
TPCN1-213ENST00000550543 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
TPCN1-213ENST00000550543 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
TPCN1-213ENST00000550543 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
TPCN1-213ENST00000550543 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
TPCN1-213ENST00000550543 NGLY1Q96IV0 654 aa21.21■□□□□ 0.99
TPCN1-213ENST00000550543 C8orf37Q96NL8 207 aa21.21■□□□□ 0.99
TPCN1-213ENST00000550543 SOS2Q07890 1332 aaPredicted RBP21.21■□□□□ 0.99
TPCN1-213ENST00000550543 NPHP3Q7Z494 1330 aa21.2■□□□□ 0.98
TPCN1-213ENST00000550543 LAMC1P11047 1609 aa21.19■□□□□ 0.98
TPCN1-213ENST00000550543 UPF1Q92900 1129 aaKnown RBP eCLIP21.19■□□□□ 0.98
TPCN1-213ENST00000550543 LRPPRCP42704 1394 aaKnown RBP21.19■□□□□ 0.98
TPCN1-213ENST00000550543 QTRT2Q9H974 415 aaKnown RBP21.18■□□□□ 0.98
TPCN1-213ENST00000550543 SETD1AO15047 1707 aaKnown RBP21.18■□□□□ 0.98
TPCN1-213ENST00000550543 PPLO60437 1756 aa21.16■□□□□ 0.98
TPCN1-213ENST00000550543 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
TPCN1-213ENST00000550543 DDX17Q92841 729 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms