RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
CACNB3-217ENST00000550483 SYNMO15061 1565 aa17.63■□□□□ 0.41
CACNB3-217ENST00000550483 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
CACNB3-217ENST00000550483 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
CACNB3-217ENST00000550483 SETD1BQ9UPS6 1966 aaKnown RBP17.62■□□□□ 0.41
CACNB3-217ENST00000550483 UGGT1Q9NYU2 1555 aa17.61■□□□□ 0.41
CACNB3-217ENST00000550483 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
CACNB3-217ENST00000550483 NRXN1Q9ULB1 1477 aa17.6■□□□□ 0.41
CACNB3-217ENST00000550483 LTBP4Q8N2S1 1624 aa17.6■□□□□ 0.41
CACNB3-217ENST00000550483 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
CACNB3-217ENST00000550483 IFT172Q9UG01 1749 aa17.59■□□□□ 0.41
CACNB3-217ENST00000550483 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
CACNB3-217ENST00000550483 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
CACNB3-217ENST00000550483 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
CACNB3-217ENST00000550483 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-217ENST00000550483 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
CACNB3-217ENST00000550483 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
CACNB3-217ENST00000550483 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
CACNB3-217ENST00000550483 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-217ENST00000550483 PPLO60437 1756 aa17.53■□□□□ 0.4
CACNB3-217ENST00000550483 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
CACNB3-217ENST00000550483 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
CACNB3-217ENST00000550483 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
CACNB3-217ENST00000550483 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-217ENST00000550483 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
CACNB3-217ENST00000550483 IDI1Q13907 227 aa17.52■□□□□ 0.4
CACNB3-217ENST00000550483 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
CACNB3-217ENST00000550483 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
CACNB3-217ENST00000550483 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
CACNB3-217ENST00000550483 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
CACNB3-217ENST00000550483 WASHC2AQ641Q2 1341 aa17.5■□□□□ 0.39
CACNB3-217ENST00000550483 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-217ENST00000550483 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
CACNB3-217ENST00000550483 C3P01024 1663 aa17.48■□□□□ 0.39
CACNB3-217ENST00000550483 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
CACNB3-217ENST00000550483 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
CACNB3-217ENST00000550483 TNRQ92752 1358 aa17.47■□□□□ 0.39
CACNB3-217ENST00000550483 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
CACNB3-217ENST00000550483 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
CACNB3-217ENST00000550483 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
CACNB3-217ENST00000550483 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.38
CACNB3-217ENST00000550483 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.38
CACNB3-217ENST00000550483 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
CACNB3-217ENST00000550483 IQSEC2Q5JU85 1478 aa17.45■□□□□ 0.38
CACNB3-217ENST00000550483 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
CACNB3-217ENST00000550483 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-217ENST00000550483 C14orf93Q9H972 538 aaKnown RBP17.45■□□□□ 0.38
CACNB3-217ENST00000550483 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
CACNB3-217ENST00000550483 MIER1Q8N108 512 aa17.44■□□□□ 0.38
CACNB3-217ENST00000550483 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNB3-217ENST00000550483 ANP32CO43423 234 aa17.43■□□□□ 0.38
CACNB3-217ENST00000550483 HSPA1LP34931 641 aa17.43■□□□□ 0.38
CACNB3-217ENST00000550483 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
CACNB3-217ENST00000550483 PIP4K2BP78356 416 aa17.42■□□□□ 0.38
CACNB3-217ENST00000550483 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CACNB3-217ENST00000550483 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CACNB3-217ENST00000550483 TMF1P82094 1093 aa17.41■□□□□ 0.38
CACNB3-217ENST00000550483 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
CACNB3-217ENST00000550483 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.38
CACNB3-217ENST00000550483 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
CACNB3-217ENST00000550483 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-217ENST00000550483 TESK2Q96S53 571 aa17.38■□□□□ 0.37
CACNB3-217ENST00000550483 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
CACNB3-217ENST00000550483 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
CACNB3-217ENST00000550483 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
CACNB3-217ENST00000550483 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
CACNB3-217ENST00000550483 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
CACNB3-217ENST00000550483 TMEM2Q9UHN6 1383 aa17.32■□□□□ 0.36
CACNB3-217ENST00000550483 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-217ENST00000550483 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-217ENST00000550483 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
CACNB3-217ENST00000550483 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
CACNB3-217ENST00000550483 MED1Q15648 1581 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-217ENST00000550483 SLIT1O75093 1534 aa17.29■□□□□ 0.36
CACNB3-217ENST00000550483 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
CACNB3-217ENST00000550483 TOM1O60784 492 aa17.28■□□□□ 0.36
CACNB3-217ENST00000550483 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
CACNB3-217ENST00000550483 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-217ENST00000550483 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-217ENST00000550483 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
CACNB3-217ENST00000550483 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
CACNB3-217ENST00000550483 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
CACNB3-217ENST00000550483 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
CACNB3-217ENST00000550483 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
CACNB3-217ENST00000550483 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
CACNB3-217ENST00000550483 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
CACNB3-217ENST00000550483 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
CACNB3-217ENST00000550483 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-217ENST00000550483 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-217ENST00000550483 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
CACNB3-217ENST00000550483 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-217ENST00000550483 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
CACNB3-217ENST00000550483 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-217ENST00000550483 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-217ENST00000550483 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
CACNB3-217ENST00000550483 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
CACNB3-217ENST00000550483 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
CACNB3-217ENST00000550483 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
CACNB3-217ENST00000550483 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
CACNB3-217ENST00000550483 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms