RNA–Protein interactions for RNA: ENST00000550367.1

TUBA1B-206, Transcript of tubulin alpha 1b, humanhuman

TSL 3

Gene TUBA1B, Length 835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-206ENST00000550367 LMTK2Q8IWU2 1503 aa15.1■□□□□ 0.01
TUBA1B-206ENST00000550367 JCADQ9P266 1359 aa15.1■□□□□ 0.01
TUBA1B-206ENST00000550367 LRP6O75581 1613 aa15.09■□□□□ 0.01
TUBA1B-206ENST00000550367 TRIM52Q96A61 297 aa15.08■□□□□ 0
TUBA1B-206ENST00000550367 COL16A1Q07092 1604 aaPredicted RBP15.07■□□□□ 0
TUBA1B-206ENST00000550367 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
TUBA1B-206ENST00000550367 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
TUBA1B-206ENST00000550367 ANKRD30AQ9BXX3 1397 aa15.06■□□□□ 0
TUBA1B-206ENST00000550367 ZFYVE9O95405 1425 aa15.06■□□□□ 0
TUBA1B-206ENST00000550367 PPP1R15AO75807 674 aaPredicted RBP15.05■□□□□ -0
TUBA1B-206ENST00000550367 UPF1Q92900 1129 aaKnown RBP eCLIP15.05■□□□□ -0
TUBA1B-206ENST00000550367 FGD6Q6ZV73 1430 aa15.05■□□□□ -0
TUBA1B-206ENST00000550367 CHD2O14647 1828 aaKnown RBP15.05■□□□□ -0
TUBA1B-206ENST00000550367 MYO5BQ9ULV0 1848 aa15.05■□□□□ -0
TUBA1B-206ENST00000550367 RIMS2Q9UQ26 1411 aa15.04■□□□□ -0
TUBA1B-206ENST00000550367 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
TUBA1B-206ENST00000550367 MEX3CQ5U5Q3 659 aaKnown RBP15.04■□□□□ -0
TUBA1B-206ENST00000550367 C14orf37Q86TY3 774 aa15.04■□□□□ -0
TUBA1B-206ENST00000550367 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
TUBA1B-206ENST00000550367 GCC2Q8IWJ2 1684 aa15.01□□□□□ -0.01
TUBA1B-206ENST00000550367 TBX22Q9Y458 520 aa15.01□□□□□ -0.01
TUBA1B-206ENST00000550367 SPATA31A6Q5VVP1 1343 aa15□□□□□ -0.01
TUBA1B-206ENST00000550367 NUTM2BA6NNL0 878 aaPredicted RBP15□□□□□ -0.01
TUBA1B-206ENST00000550367 NUTM2EB1AL46 878 aaPredicted RBP15□□□□□ -0.01
TUBA1B-206ENST00000550367 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
TUBA1B-206ENST00000550367 NUTM2AQ8IVF1 878 aaPredicted RBP15□□□□□ -0.01
TUBA1B-206ENST00000550367 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
TUBA1B-206ENST00000550367 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
TUBA1B-206ENST00000550367 APLP2Q06481 763 aa14.99□□□□□ -0.01
TUBA1B-206ENST00000550367 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.98□□□□□ -0.01
TUBA1B-206ENST00000550367 AHDC1Q5TGY3 1603 aaPredicted RBP14.97□□□□□ -0.01
TUBA1B-206ENST00000550367 ATF3P18847 181 aa14.97□□□□□ -0.01
TUBA1B-206ENST00000550367 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
TUBA1B-206ENST00000550367 C19orf44Q9H6X5 657 aa14.97□□□□□ -0.01
TUBA1B-206ENST00000550367 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
TUBA1B-206ENST00000550367 ADGRL2O95490 1459 aa14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 RPRD2Q5VT52 1461 aaKnown RBP14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 RXRBP28702 533 aa14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 HDGFP51858 240 aaKnown RBP14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
TUBA1B-206ENST00000550367 PTPRUQ92729 1446 aa14.95□□□□□ -0.02
TUBA1B-206ENST00000550367 NCOA3Q9Y6Q9 1424 aa14.95□□□□□ -0.02
TUBA1B-206ENST00000550367 AMOTL2Q9Y2J4 779 aa14.95□□□□□ -0.02
TUBA1B-206ENST00000550367 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
TUBA1B-206ENST00000550367 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
TUBA1B-206ENST00000550367 AFF2P51816 1311 aa14.93□□□□□ -0.02
TUBA1B-206ENST00000550367 DDX17Q92841 729 aaKnown RBP14.92□□□□□ -0.02
TUBA1B-206ENST00000550367 E9PCH4 1651 aa14.9□□□□□ -0.02
TUBA1B-206ENST00000550367 SRCAPQ6ZRS2 3230 aa14.89□□□□□ -0.03
TUBA1B-206ENST00000550367 PIK3R4Q99570 1358 aa14.89□□□□□ -0.03
TUBA1B-206ENST00000550367 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
TUBA1B-206ENST00000550367 C8orf37Q96NL8 207 aa14.88□□□□□ -0.03
TUBA1B-206ENST00000550367 UNC13BO14795 1591 aa14.88□□□□□ -0.03
TUBA1B-206ENST00000550367 TRPM2O94759 1503 aa14.87□□□□□ -0.03
TUBA1B-206ENST00000550367 RGS12O14924 1447 aa14.87□□□□□ -0.03
TUBA1B-206ENST00000550367 MST1RQ04912 1400 aa14.87□□□□□ -0.03
TUBA1B-206ENST00000550367 CDK12Q9NYV4 1490 aaPredicted RBP14.87□□□□□ -0.03
TUBA1B-206ENST00000550367 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
TUBA1B-206ENST00000550367 QTRT2Q9H974 415 aaKnown RBP14.86□□□□□ -0.03
TUBA1B-206ENST00000550367 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
TUBA1B-206ENST00000550367 NRXN3Q9Y4C0 1643 aa14.84□□□□□ -0.03
TUBA1B-206ENST00000550367 ADAMTS2O95450 1211 aa14.84□□□□□ -0.03
TUBA1B-206ENST00000550367 RBM6P78332 1123 aaKnown RBP14.84□□□□□ -0.03
TUBA1B-206ENST00000550367 LRRC59Q96AG4 307 aaKnown RBP14.84□□□□□ -0.03
TUBA1B-206ENST00000550367 METP08581 1390 aa14.84□□□□□ -0.03
TUBA1B-206ENST00000550367 XRN1Q8IZH2 1706 aaKnown RBP14.83□□□□□ -0.03
TUBA1B-206ENST00000550367 NUP155O75694 1391 aa14.83□□□□□ -0.04
TUBA1B-206ENST00000550367 PNPLA6Q8IY17 1366 aa14.83□□□□□ -0.04
TUBA1B-206ENST00000550367 DCCP43146 1447 aa14.83□□□□□ -0.04
TUBA1B-206ENST00000550367 IQGAP3Q86VI3 1631 aa14.82□□□□□ -0.04
TUBA1B-206ENST00000550367 ZNF326Q5BKZ1 582 aaKnown RBP14.81□□□□□ -0.04
TUBA1B-206ENST00000550367 NGLY1Q96IV0 654 aa14.81□□□□□ -0.04
TUBA1B-206ENST00000550367 ITGAEP38570 1179 aa14.8□□□□□ -0.04
TUBA1B-206ENST00000550367 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
TUBA1B-206ENST00000550367 ADGRL3Q9HAR2 1447 aa14.78□□□□□ -0.04
TUBA1B-206ENST00000550367 NALCNQ8IZF0 1738 aa14.78□□□□□ -0.04
TUBA1B-206ENST00000550367 ORAI2Q96SN7 254 aa14.77□□□□□ -0.05
TUBA1B-206ENST00000550367 C1orf167Q5SNV9 1468 aa14.76□□□□□ -0.05
TUBA1B-206ENST00000550367 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
TUBA1B-206ENST00000550367 USP21Q9UK80 565 aa14.75□□□□□ -0.05
TUBA1B-206ENST00000550367 SPHKAPQ2M3C7 1700 aa14.73□□□□□ -0.05
TUBA1B-206ENST00000550367 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
TUBA1B-206ENST00000550367 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
TUBA1B-206ENST00000550367 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
TUBA1B-206ENST00000550367 ROBO2Q9HCK4 1378 aa14.72□□□□□ -0.05
TUBA1B-206ENST00000550367 NEXMIFQ5QGS0 1516 aa14.71□□□□□ -0.05
TUBA1B-206ENST00000550367 TRPC5Q9UL62 973 aaPredicted RBP14.71□□□□□ -0.05
TUBA1B-206ENST00000550367 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
TUBA1B-206ENST00000550367 FNBP4Q8N3X1 1017 aaPredicted RBP14.7□□□□□ -0.06
TUBA1B-206ENST00000550367 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
TUBA1B-206ENST00000550367 EP400Q96L91 3159 aa14.69□□□□□ -0.06
TUBA1B-206ENST00000550367 ATRNO75882 1429 aa14.68□□□□□ -0.06
TUBA1B-206ENST00000550367 LAMC1P11047 1609 aa14.68□□□□□ -0.06
TUBA1B-206ENST00000550367 XPCQ01831 940 aaPredicted RBP14.68□□□□□ -0.06
TUBA1B-206ENST00000550367 PTCH1Q13635 1447 aa14.66□□□□□ -0.06
TUBA1B-206ENST00000550367 BCL9LQ86UU0 1499 aa14.65□□□□□ -0.06
TUBA1B-206ENST00000550367 ESCO1Q5FWF5 840 aa14.65□□□□□ -0.06
TUBA1B-206ENST00000550367 NUTM2FA1L443 756 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms