RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
GNPTAB-207ENST00000550352 TMUB1Q9BVT8 246 aa10.89□□□□□ -0.67
GNPTAB-207ENST00000550352 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
GNPTAB-207ENST00000550352 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
GNPTAB-207ENST00000550352 DAXXQ9UER7 740 aaPredicted RBP10.87□□□□□ -0.67
GNPTAB-207ENST00000550352 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
GNPTAB-207ENST00000550352 WNT2BQ93097 391 aa10.85□□□□□ -0.67
GNPTAB-207ENST00000550352 KDM4CQ9H3R0 1056 aa10.85□□□□□ -0.67
GNPTAB-207ENST00000550352 ANKK1Q8NFD2 765 aa10.84□□□□□ -0.67
GNPTAB-207ENST00000550352 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
GNPTAB-207ENST00000550352 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
GNPTAB-207ENST00000550352 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
GNPTAB-207ENST00000550352 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
GNPTAB-207ENST00000550352 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 RNF40O75150 1001 aa10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 MS4A1P11836 297 aa10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 BCAMP50895 628 aa10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 KCTD12Q96CX2 325 aaKnown RBP10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
GNPTAB-207ENST00000550352 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
GNPTAB-207ENST00000550352 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
GNPTAB-207ENST00000550352 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
GNPTAB-207ENST00000550352 SLC10A3P09131 477 aa10.78□□□□□ -0.68
GNPTAB-207ENST00000550352 RDH13Q8NBN7 331 aa10.78□□□□□ -0.68
GNPTAB-207ENST00000550352 CD46P15529 392 aa10.77□□□□□ -0.69
GNPTAB-207ENST00000550352 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
GNPTAB-207ENST00000550352 THSD4Q6ZMP0 1018 aa10.77□□□□□ -0.69
GNPTAB-207ENST00000550352 HPS5Q9UPZ3 1129 aa10.77□□□□□ -0.69
GNPTAB-207ENST00000550352 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
GNPTAB-207ENST00000550352 BEGAINQ9BUH8 593 aa10.75□□□□□ -0.69
GNPTAB-207ENST00000550352 PPP4CP60510 307 aa10.74□□□□□ -0.69
GNPTAB-207ENST00000550352 RSPH4AQ5TD94 716 aa10.74□□□□□ -0.69
GNPTAB-207ENST00000550352 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
GNPTAB-207ENST00000550352 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
GNPTAB-207ENST00000550352 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
GNPTAB-207ENST00000550352 WBP1LQ9NX94 342 aa10.73□□□□□ -0.69
GNPTAB-207ENST00000550352 CFHP08603 1231 aa10.72□□□□□ -0.69
GNPTAB-207ENST00000550352 PTPN5P54829 565 aa10.72□□□□□ -0.69
GNPTAB-207ENST00000550352 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
GNPTAB-207ENST00000550352 GCGRP47871 477 aa10.71□□□□□ -0.69
GNPTAB-207ENST00000550352 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
GNPTAB-207ENST00000550352 DDRGK1Q96HY6 314 aa10.7□□□□□ -0.7
GNPTAB-207ENST00000550352 NECTIN2Q92692 538 aa10.69□□□□□ -0.7
GNPTAB-207ENST00000550352 APLP1P51693 650 aa10.68□□□□□ -0.7
GNPTAB-207ENST00000550352 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
GNPTAB-207ENST00000550352 KDM4AO75164 1064 aa10.66□□□□□ -0.7
GNPTAB-207ENST00000550352 KMT5BQ4FZB7 885 aa10.66□□□□□ -0.7
GNPTAB-207ENST00000550352 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
GNPTAB-207ENST00000550352 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
GNPTAB-207ENST00000550352 ACTN4O43707 911 aaKnown RBP10.64□□□□□ -0.71
GNPTAB-207ENST00000550352 FUT2Q10981 343 aa10.64□□□□□ -0.71
GNPTAB-207ENST00000550352 PRR14Q9BWN1 585 aa10.63□□□□□ -0.71
GNPTAB-207ENST00000550352 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
GNPTAB-207ENST00000550352 MYSM1Q5VVJ2 828 aa10.61□□□□□ -0.71
GNPTAB-207ENST00000550352 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
GNPTAB-207ENST00000550352 HLA-CQ95604 372 aa10.61□□□□□ -0.71
GNPTAB-207ENST00000550352 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 HOXA2O43364 376 aa10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 NDUFV2P19404 249 aa10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 USP46P62068 366 aa10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
GNPTAB-207ENST00000550352 ATP6V1AP38606 617 aa10.59□□□□□ -0.71
GNPTAB-207ENST00000550352 PCDHB3Q9Y5E6 796 aa10.59□□□□□ -0.71
GNPTAB-207ENST00000550352 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
GNPTAB-207ENST00000550352 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
GNPTAB-207ENST00000550352 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
GNPTAB-207ENST00000550352 POLR3EQ9NVU0 708 aa10.58□□□□□ -0.72
GNPTAB-207ENST00000550352 MORN1Q5T089 497 aa10.57□□□□□ -0.72
GNPTAB-207ENST00000550352 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
GNPTAB-207ENST00000550352 SKIV2LQ15477 1246 aaKnown RBP10.56□□□□□ -0.72
GNPTAB-207ENST00000550352 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
GNPTAB-207ENST00000550352 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
GNPTAB-207ENST00000550352 RIC3Q7Z5B4 369 aa10.56□□□□□ -0.72
GNPTAB-207ENST00000550352 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
GNPTAB-207ENST00000550352 CLK2P49760 499 aaKnown RBP10.55□□□□□ -0.72
GNPTAB-207ENST00000550352 COPS2P61201 443 aa10.55□□□□□ -0.72
GNPTAB-207ENST00000550352 SPTLC1O15269 473 aa10.54□□□□□ -0.72
GNPTAB-207ENST00000550352 FDX1P10109 184 aa10.54□□□□□ -0.72
GNPTAB-207ENST00000550352 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
GNPTAB-207ENST00000550352 MTRQ99707 1265 aa10.54□□□□□ -0.72
GNPTAB-207ENST00000550352 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
GNPTAB-207ENST00000550352 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
GNPTAB-207ENST00000550352 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
GNPTAB-207ENST00000550352 PCDHB15Q9Y5E8 787 aa10.53□□□□□ -0.72
GNPTAB-207ENST00000550352 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
GNPTAB-207ENST00000550352 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
GNPTAB-207ENST00000550352 SCUBE3Q8IX30 993 aa10.52□□□□□ -0.73
GNPTAB-207ENST00000550352 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
GNPTAB-207ENST00000550352 NR1I2O75469 434 aa10.51□□□□□ -0.73
GNPTAB-207ENST00000550352 GJA5P36382 358 aa10.51□□□□□ -0.73
GNPTAB-207ENST00000550352 PCMTD1Q96MG8 357 aaPredicted RBP10.51□□□□□ -0.73
GNPTAB-207ENST00000550352 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
GNPTAB-207ENST00000550352 IL21Q9HBE4 155 aa10.49□□□□□ -0.73
GNPTAB-207ENST00000550352 RNF19BQ6ZMZ0 732 aa10.48□□□□□ -0.73
GNPTAB-207ENST00000550352 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
GNPTAB-207ENST00000550352 SYMPKQ92797 1274 aaKnown RBP10.48□□□□□ -0.73
GNPTAB-207ENST00000550352 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms