RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
HCFC2-204ENST00000550335 ZNF330Q9Y3S2 320 aaPredicted RBP10.38□□□□□ -0.75
HCFC2-204ENST00000550335 SMAPO00193 183 aa10.37□□□□□ -0.75
HCFC2-204ENST00000550335 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
HCFC2-204ENST00000550335 SP7Q8TDD2 431 aaPredicted RBP10.37□□□□□ -0.75
HCFC2-204ENST00000550335 TATDN2Q93075 761 aa10.37□□□□□ -0.75
HCFC2-204ENST00000550335 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
HCFC2-204ENST00000550335 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
HCFC2-204ENST00000550335 NBPF26B4DH59 902 aa10.36□□□□□ -0.75
HCFC2-204ENST00000550335 CD46P15529 392 aa10.36□□□□□ -0.75
HCFC2-204ENST00000550335 NDUFV2P19404 249 aa10.36□□□□□ -0.75
HCFC2-204ENST00000550335 DNAJB2P25686 324 aa10.36□□□□□ -0.75
HCFC2-204ENST00000550335 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
HCFC2-204ENST00000550335 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
HCFC2-204ENST00000550335 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
HCFC2-204ENST00000550335 MOXD2PA6NHM9 499 aa10.35□□□□□ -0.75
HCFC2-204ENST00000550335 C3orf80F5H4A9 247 aa10.35□□□□□ -0.75
HCFC2-204ENST00000550335 HRCP23327 699 aa10.35□□□□□ -0.75
HCFC2-204ENST00000550335 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
HCFC2-204ENST00000550335 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
HCFC2-204ENST00000550335 PSDA5PKW4 1024 aaPredicted RBP10.34□□□□□ -0.75
HCFC2-204ENST00000550335 PPP1R3GB7ZBB8 358 aa10.34□□□□□ -0.75
HCFC2-204ENST00000550335 AP1G2O75843 785 aa10.34□□□□□ -0.75
HCFC2-204ENST00000550335 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
HCFC2-204ENST00000550335 GDPD2Q9HCC8 539 aa10.34□□□□□ -0.75
HCFC2-204ENST00000550335 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
HCFC2-204ENST00000550335 SPTLC1O15269 473 aa10.33□□□□□ -0.76
HCFC2-204ENST00000550335 ABL2P42684 1182 aa10.33□□□□□ -0.76
HCFC2-204ENST00000550335 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
HCFC2-204ENST00000550335 SCUBE2Q9NQ36 999 aa10.33□□□□□ -0.76
HCFC2-204ENST00000550335 TRIM6-TRIM34B2RNG4 842 aa10.32□□□□□ -0.76
HCFC2-204ENST00000550335 QPCTQ16769 361 aa10.32□□□□□ -0.76
HCFC2-204ENST00000550335 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
HCFC2-204ENST00000550335 WWC1Q8IX03 1113 aa10.32□□□□□ -0.76
HCFC2-204ENST00000550335 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
HCFC2-204ENST00000550335 PROX2Q3B8N5 592 aa10.31□□□□□ -0.76
HCFC2-204ENST00000550335 PRM3Q9NNZ6 103 aa10.31□□□□□ -0.76
HCFC2-204ENST00000550335 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
HCFC2-204ENST00000550335 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
HCFC2-204ENST00000550335 POTEB2H3BUK9 544 aa10.29□□□□□ -0.76
HCFC2-204ENST00000550335 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
HCFC2-204ENST00000550335 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
HCFC2-204ENST00000550335 CABLES1Q8TDN4 633 aa10.29□□□□□ -0.76
HCFC2-204ENST00000550335 ZBTB7CA1YPR0 619 aa10.28□□□□□ -0.76
HCFC2-204ENST00000550335 KDM4AO75164 1064 aa10.27□□□□□ -0.77
HCFC2-204ENST00000550335 RSPH4AQ5TD94 716 aa10.27□□□□□ -0.77
HCFC2-204ENST00000550335 KCNH8Q96L42 1107 aa10.27□□□□□ -0.77
HCFC2-204ENST00000550335 LILRB3O75022 631 aa10.26□□□□□ -0.77
HCFC2-204ENST00000550335 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
HCFC2-204ENST00000550335 TSC1Q92574 1164 aa10.26□□□□□ -0.77
HCFC2-204ENST00000550335 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
HCFC2-204ENST00000550335 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
HCFC2-204ENST00000550335 CALR3Q96L12 384 aaKnown RBP10.25□□□□□ -0.77
HCFC2-204ENST00000550335 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
HCFC2-204ENST00000550335 TBC1D2BQ9UPU7 963 aa10.25□□□□□ -0.77
HCFC2-204ENST00000550335 USP17L8P0C7I0 530 aa10.23□□□□□ -0.77
HCFC2-204ENST00000550335 SNPHO15079 494 aa10.22□□□□□ -0.77
HCFC2-204ENST00000550335 FDX1P10109 184 aa10.22□□□□□ -0.77
HCFC2-204ENST00000550335 HDGFP51858 240 aaKnown RBP10.22□□□□□ -0.77
HCFC2-204ENST00000550335 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
HCFC2-204ENST00000550335 ZBTB3Q9H5J0 574 aa10.22□□□□□ -0.77
HCFC2-204ENST00000550335 POM121CA8CG34 1229 aa10.21□□□□□ -0.77
HCFC2-204ENST00000550335 GCGRP47871 477 aa10.21□□□□□ -0.77
HCFC2-204ENST00000550335 SWT1Q5T5J6 900 aaKnown RBP10.21□□□□□ -0.77
HCFC2-204ENST00000550335 HOXA2O43364 376 aa10.2□□□□□ -0.78
HCFC2-204ENST00000550335 HOXB1P14653 301 aaPredicted RBP10.2□□□□□ -0.78
HCFC2-204ENST00000550335 GJA5P36382 358 aa10.2□□□□□ -0.78
HCFC2-204ENST00000550335 HLA-CQ95604 372 aa10.2□□□□□ -0.78
HCFC2-204ENST00000550335 PSEN2P49810 448 aa10.19□□□□□ -0.78
HCFC2-204ENST00000550335 USP46P62068 366 aa10.19□□□□□ -0.78
HCFC2-204ENST00000550335 PRPF38BQ5VTL8 546 aaKnown RBP10.19□□□□□ -0.78
HCFC2-204ENST00000550335 AEBP1Q8IUX7 1158 aa10.19□□□□□ -0.78
HCFC2-204ENST00000550335 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
HCFC2-204ENST00000550335 GLMNQ92990 594 aa10.18□□□□□ -0.78
HCFC2-204ENST00000550335 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
HCFC2-204ENST00000550335 RNF40O75150 1001 aa10.17□□□□□ -0.78
HCFC2-204ENST00000550335 SLC10A3P09131 477 aa10.17□□□□□ -0.78
HCFC2-204ENST00000550335 CTDSPL2Q05D32 466 aa10.17□□□□□ -0.78
HCFC2-204ENST00000550335 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
HCFC2-204ENST00000550335 NDUFB9Q9Y6M9 179 aa10.17□□□□□ -0.78
HCFC2-204ENST00000550335 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
HCFC2-204ENST00000550335 RANGAP1P46060 587 aaPredicted RBP10.16□□□□□ -0.78
HCFC2-204ENST00000550335 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
HCFC2-204ENST00000550335 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
HCFC2-204ENST00000550335 PCDHGC3Q9UN70 934 aa10.16□□□□□ -0.78
HCFC2-204ENST00000550335 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
HCFC2-204ENST00000550335 RFX1P22670 979 aa10.14□□□□□ -0.79
HCFC2-204ENST00000550335 MTMR2Q13614 643 aa10.14□□□□□ -0.79
HCFC2-204ENST00000550335 RETREG2Q8NC44 543 aa10.14□□□□□ -0.79
HCFC2-204ENST00000550335 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
HCFC2-204ENST00000550335 GRIPAP1Q4V328 841 aa10.13□□□□□ -0.79
HCFC2-204ENST00000550335 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
HCFC2-204ENST00000550335 ERBB3P21860 1342 aa10.12□□□□□ -0.79
HCFC2-204ENST00000550335 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
HCFC2-204ENST00000550335 AXIN2Q9Y2T1 843 aa10.12□□□□□ -0.79
HCFC2-204ENST00000550335 GJD4Q96KN9 370 aaPredicted RBP10.11□□□□□ -0.79
HCFC2-204ENST00000550335 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
HCFC2-204ENST00000550335 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
HCFC2-204ENST00000550335 ARHGAP33O14559 1287 aa10.1□□□□□ -0.79
HCFC2-204ENST00000550335 VAC14Q08AM6 782 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms