RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.34
CACNB3-215ENST00000550190 NEURL4Q96JN8 1562 aa12.95□□□□□ -0.34
CACNB3-215ENST00000550190 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
CACNB3-215ENST00000550190 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-215ENST00000550190 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
CACNB3-215ENST00000550190 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
CACNB3-215ENST00000550190 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
CACNB3-215ENST00000550190 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
CACNB3-215ENST00000550190 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
CACNB3-215ENST00000550190 BCANQ96GW7 911 aa12.94□□□□□ -0.34
CACNB3-215ENST00000550190 EID1Q9Y6B2 187 aa12.94□□□□□ -0.34
CACNB3-215ENST00000550190 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
CACNB3-215ENST00000550190 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNB3-215ENST00000550190 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-215ENST00000550190 POLR1AO95602 1720 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-215ENST00000550190 SLIT1O75093 1534 aa12.92□□□□□ -0.34
CACNB3-215ENST00000550190 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
CACNB3-215ENST00000550190 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
CACNB3-215ENST00000550190 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
CACNB3-215ENST00000550190 LTKP29376 864 aa12.91□□□□□ -0.34
CACNB3-215ENST00000550190 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
CACNB3-215ENST00000550190 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
CACNB3-215ENST00000550190 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-215ENST00000550190 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
CACNB3-215ENST00000550190 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
CACNB3-215ENST00000550190 MYOM2P54296 1465 aa12.88□□□□□ -0.35
CACNB3-215ENST00000550190 STRCQ7RTU9 1775 aa12.86□□□□□ -0.35
CACNB3-215ENST00000550190 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
CACNB3-215ENST00000550190 NBPF8Q3BBV2 869 aa12.86□□□□□ -0.35
CACNB3-215ENST00000550190 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
CACNB3-215ENST00000550190 CFAP70Q5T0N1 1121 aa12.85□□□□□ -0.35
CACNB3-215ENST00000550190 NPHP4O75161 1426 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-215ENST00000550190 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
CACNB3-215ENST00000550190 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
CACNB3-215ENST00000550190 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
CACNB3-215ENST00000550190 TRPM1Q7Z4N2 1603 aa12.83□□□□□ -0.36
CACNB3-215ENST00000550190 ALKQ9UM73 1620 aa12.83□□□□□ -0.36
CACNB3-215ENST00000550190 NRXN3Q9Y4C0 1643 aa12.83□□□□□ -0.36
CACNB3-215ENST00000550190 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
CACNB3-215ENST00000550190 C14orf93Q9H972 538 aaKnown RBP12.82□□□□□ -0.36
CACNB3-215ENST00000550190 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
CACNB3-215ENST00000550190 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
CACNB3-215ENST00000550190 LAMC1P11047 1609 aa12.81□□□□□ -0.36
CACNB3-215ENST00000550190 MED14O60244 1454 aa12.81□□□□□ -0.36
CACNB3-215ENST00000550190 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
CACNB3-215ENST00000550190 TMEM132EQ6IEE7 984 aa12.81□□□□□ -0.36
CACNB3-215ENST00000550190 SETD1AO15047 1707 aaKnown RBP12.8□□□□□ -0.36
CACNB3-215ENST00000550190 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CACNB3-215ENST00000550190 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
CACNB3-215ENST00000550190 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
CACNB3-215ENST00000550190 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
CACNB3-215ENST00000550190 DIP2AQ14689 1571 aa12.78□□□□□ -0.36
CACNB3-215ENST00000550190 STK26Q9P289 416 aa12.78□□□□□ -0.36
CACNB3-215ENST00000550190 RALGAPBQ86X10 1494 aa12.78□□□□□ -0.36
CACNB3-215ENST00000550190 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
CACNB3-215ENST00000550190 METP08581 1390 aa12.77□□□□□ -0.37
CACNB3-215ENST00000550190 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
CACNB3-215ENST00000550190 ASXL1Q8IXJ9 1541 aa12.75□□□□□ -0.37
CACNB3-215ENST00000550190 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
CACNB3-215ENST00000550190 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
CACNB3-215ENST00000550190 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
CACNB3-215ENST00000550190 YTHDC2Q9H6S0 1430 aaKnown RBP12.73□□□□□ -0.37
CACNB3-215ENST00000550190 PTPRUQ92729 1446 aa12.72□□□□□ -0.37
CACNB3-215ENST00000550190 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
CACNB3-215ENST00000550190 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
CACNB3-215ENST00000550190 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.37
CACNB3-215ENST00000550190 KCNA6P17658 529 aa12.71□□□□□ -0.37
CACNB3-215ENST00000550190 KNDC1Q76NI1 1749 aa12.71□□□□□ -0.38
CACNB3-215ENST00000550190 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
CACNB3-215ENST00000550190 ZNF335Q9H4Z2 1342 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-215ENST00000550190 SAFB2Q14151 953 aaKnown RBP eCLIP12.7□□□□□ -0.38
CACNB3-215ENST00000550190 POGKQ9P215 609 aa12.7□□□□□ -0.38
CACNB3-215ENST00000550190 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
CACNB3-215ENST00000550190 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
CACNB3-215ENST00000550190 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
CACNB3-215ENST00000550190 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
CACNB3-215ENST00000550190 USP47Q96K76 1375 aa12.69□□□□□ -0.38
CACNB3-215ENST00000550190 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
CACNB3-215ENST00000550190 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-215ENST00000550190 RBM33Q96EV2 1170 aaKnown RBP12.68□□□□□ -0.38
CACNB3-215ENST00000550190 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
CACNB3-215ENST00000550190 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-215ENST00000550190 NWD1Q149M9 1564 aa12.68□□□□□ -0.38
CACNB3-215ENST00000550190 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
CACNB3-215ENST00000550190 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
CACNB3-215ENST00000550190 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
CACNB3-215ENST00000550190 CPS1P31327 1500 aa12.67□□□□□ -0.38
CACNB3-215ENST00000550190 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
CACNB3-215ENST00000550190 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
CACNB3-215ENST00000550190 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
CACNB3-215ENST00000550190 DLC1Q96QB1 1528 aa12.66□□□□□ -0.38
CACNB3-215ENST00000550190 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
CACNB3-215ENST00000550190 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-215ENST00000550190 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-215ENST00000550190 TECPR2O15040 1411 aa12.64□□□□□ -0.39
CACNB3-215ENST00000550190 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
CACNB3-215ENST00000550190 NKTRP30414 1462 aaKnown RBP12.64□□□□□ -0.39
CACNB3-215ENST00000550190 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
CACNB3-215ENST00000550190 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
CACNB3-215ENST00000550190 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms