RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 E9PCH4 1651 aa30.38■■■□□ 2.45
SLC38A1-208ENST00000550173 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
SLC38A1-208ENST00000550173 CHGAP10645 457 aaKnown RBP30.37■■■□□ 2.45
SLC38A1-208ENST00000550173 NUP155O75694 1391 aa30.37■■■□□ 2.45
SLC38A1-208ENST00000550173 HDGFP51858 240 aaKnown RBP30.36■■■□□ 2.45
SLC38A1-208ENST00000550173 PPP1R15AO75807 674 aaPredicted RBP30.35■■■□□ 2.45
SLC38A1-208ENST00000550173 ZFYVE9O95405 1425 aa30.35■■■□□ 2.45
SLC38A1-208ENST00000550173 RIMS2Q9UQ26 1411 aa30.35■■■□□ 2.45
SLC38A1-208ENST00000550173 TMEM131LA2VDJ0 1609 aa30.35■■■□□ 2.45
SLC38A1-208ENST00000550173 TMEM94Q12767 1356 aa30.34■■■□□ 2.45
SLC38A1-208ENST00000550173 PROSER2Q86WR7 435 aaPredicted RBP30.34■■■□□ 2.45
SLC38A1-208ENST00000550173 MED1Q15648 1581 aaPredicted RBP30.33■■■□□ 2.45
SLC38A1-208ENST00000550173 PLEKHG1Q9ULL1 1385 aa30.31■■■□□ 2.44
SLC38A1-208ENST00000550173 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.28■■■□□ 2.44
SLC38A1-208ENST00000550173 RBM33Q96EV2 1170 aaKnown RBP30.28■■■□□ 2.44
SLC38A1-208ENST00000550173 NWD1Q149M9 1564 aa30.27■■■□□ 2.44
SLC38A1-208ENST00000550173 NKTRP30414 1462 aaKnown RBP30.25■■■□□ 2.43
SLC38A1-208ENST00000550173 NUTM2DQ5VT03 806 aaPredicted RBP30.24■■■□□ 2.43
SLC38A1-208ENST00000550173 RRBP1Q9P2E9 1410 aaKnown RBP30.22■■■□□ 2.43
SLC38A1-208ENST00000550173 TBX22Q9Y458 520 aa30.21■■■□□ 2.43
SLC38A1-208ENST00000550173 CHD2O14647 1828 aaKnown RBP30.21■■■□□ 2.43
SLC38A1-208ENST00000550173 FAM135BQ49AJ0 1406 aa30.21■■■□□ 2.43
SLC38A1-208ENST00000550173 PHF23Q9BUL5 403 aaPredicted RBP30.19■■■□□ 2.42
SLC38A1-208ENST00000550173 MSH6P52701 1360 aa30.16■■■□□ 2.42
SLC38A1-208ENST00000550173 ADAMTS13Q76LX8 1427 aa30.14■■■□□ 2.42
SLC38A1-208ENST00000550173 SPHKAPQ2M3C7 1700 aa30.14■■■□□ 2.42
SLC38A1-208ENST00000550173 ROBO1Q9Y6N7 1651 aa30.12■■■□□ 2.41
SLC38A1-208ENST00000550173 DIP2AQ14689 1571 aa30.11■■■□□ 2.41
SLC38A1-208ENST00000550173 NAIPQ13075 1403 aa30.11■■■□□ 2.41
SLC38A1-208ENST00000550173 PIK3R4Q99570 1358 aa30.08■■■□□ 2.41
SLC38A1-208ENST00000550173 ZNF326Q5BKZ1 582 aaKnown RBP30.08■■■□□ 2.41
SLC38A1-208ENST00000550173 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
SLC38A1-208ENST00000550173 C14orf37Q86TY3 774 aa30.06■■■□□ 2.4
SLC38A1-208ENST00000550173 NCOA3Q9Y6Q9 1424 aa30.05■■■□□ 2.4
SLC38A1-208ENST00000550173 TRPM2O94759 1503 aa30.04■■■□□ 2.4
SLC38A1-208ENST00000550173 TRIM52Q96A61 297 aa30.02■■■□□ 2.4
SLC38A1-208ENST00000550173 AMOTL2Q9Y2J4 779 aa30.02■■■□□ 2.4
SLC38A1-208ENST00000550173 CLTCL1P53675 1640 aa30■■■□□ 2.39
SLC38A1-208ENST00000550173 PTPRUQ92729 1446 aa29.99■■■□□ 2.39
SLC38A1-208ENST00000550173 HFM1A2PYH4 1435 aa29.98■■■□□ 2.39
SLC38A1-208ENST00000550173 C19orf44Q9H6X5 657 aa29.97■■■□□ 2.39
SLC38A1-208ENST00000550173 NRXN3Q9Y4C0 1643 aa29.96■■■□□ 2.39
SLC38A1-208ENST00000550173 SETBP1Q9Y6X0 1596 aa29.96■■■□□ 2.39
SLC38A1-208ENST00000550173 CADPS2Q86UW7 1296 aa29.95■■■□□ 2.39
SLC38A1-208ENST00000550173 PHLPP1O60346 1717 aa29.95■■■□□ 2.38
SLC38A1-208ENST00000550173 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.95■■■□□ 2.38
SLC38A1-208ENST00000550173 KIF1BO60333 1816 aa29.94■■■□□ 2.38
SLC38A1-208ENST00000550173 ATF3P18847 181 aa29.94■■■□□ 2.38
SLC38A1-208ENST00000550173 SLC4A1APQ9BWU0 796 aaKnown RBP29.92■■■□□ 2.38
SLC38A1-208ENST00000550173 NEXMIFQ5QGS0 1516 aa29.91■■■□□ 2.38
SLC38A1-208ENST00000550173 RGS17Q9UGC6 210 aaPredicted RBP29.91■■■□□ 2.38
SLC38A1-208ENST00000550173 METP08581 1390 aa29.89■■■□□ 2.37
SLC38A1-208ENST00000550173 XRN1Q8IZH2 1706 aaKnown RBP29.88■■■□□ 2.37
SLC38A1-208ENST00000550173 JCADQ9P266 1359 aa29.87■■■□□ 2.37
SLC38A1-208ENST00000550173 COL16A1Q07092 1604 aaPredicted RBP29.83■■■□□ 2.37
SLC38A1-208ENST00000550173 VGFO15240 615 aaPredicted RBP29.82■■■□□ 2.36
SLC38A1-208ENST00000550173 DCCP43146 1447 aa29.81■■■□□ 2.36
SLC38A1-208ENST00000550173 BRINP3Q76B58 766 aa29.79■■■□□ 2.36
SLC38A1-208ENST00000550173 AHDC1Q5TGY3 1603 aaPredicted RBP29.78■■■□□ 2.36
SLC38A1-208ENST00000550173 RPGRIP1LQ68CZ1 1315 aa29.77■■■□□ 2.36
SLC38A1-208ENST00000550173 FOXD1Q16676 465 aa29.77■■■□□ 2.36
SLC38A1-208ENST00000550173 POTEAQ6S8J7 498 aa29.77■■■□□ 2.36
SLC38A1-208ENST00000550173 ADGRL3Q9HAR2 1447 aa29.73■■■□□ 2.35
SLC38A1-208ENST00000550173 MST1RQ04912 1400 aa29.72■■■□□ 2.35
SLC38A1-208ENST00000550173 SPATA31A6Q5VVP1 1343 aa29.71■■■□□ 2.35
SLC38A1-208ENST00000550173 PPLO60437 1756 aa29.7■■■□□ 2.35
SLC38A1-208ENST00000550173 ASXL1Q8IXJ9 1541 aa29.7■■■□□ 2.34
SLC38A1-208ENST00000550173 SETD1AO15047 1707 aaKnown RBP29.69■■■□□ 2.34
SLC38A1-208ENST00000550173 NALCNQ8IZF0 1738 aa29.68■■■□□ 2.34
SLC38A1-208ENST00000550173 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
SLC38A1-208ENST00000550173 SHPRHQ149N8 1683 aa29.67■■■□□ 2.34
SLC38A1-208ENST00000550173 MEX3CQ5U5Q3 659 aaKnown RBP29.67■■■□□ 2.34
SLC38A1-208ENST00000550173 CCDC144AA2RUR9 1427 aa29.67■■■□□ 2.34
SLC38A1-208ENST00000550173 LRP6O75581 1613 aa29.66■■■□□ 2.34
SLC38A1-208ENST00000550173 PTCH1Q13635 1447 aa29.65■■■□□ 2.34
SLC38A1-208ENST00000550173 ROBO2Q9HCK4 1378 aa29.64■■■□□ 2.34
SLC38A1-208ENST00000550173 RGL3Q3MIN7 710 aa29.63■■■□□ 2.33
SLC38A1-208ENST00000550173 NHSL1Q5SYE7 1610 aa29.61■■■□□ 2.33
SLC38A1-208ENST00000550173 NUTM2BA6NNL0 878 aaPredicted RBP29.6■■■□□ 2.33
SLC38A1-208ENST00000550173 NUTM2EB1AL46 878 aaPredicted RBP29.6■■■□□ 2.33
SLC38A1-208ENST00000550173 NUTM2AQ8IVF1 878 aaPredicted RBP29.6■■■□□ 2.33
SLC38A1-208ENST00000550173 SETD5Q9C0A6 1442 aa29.6■■■□□ 2.33
SLC38A1-208ENST00000550173 DDX17Q92841 729 aaKnown RBP29.59■■■□□ 2.33
SLC38A1-208ENST00000550173 ADGRF5Q8IZF2 1346 aa29.59■■■□□ 2.33
SLC38A1-208ENST00000550173 C1orf167Q5SNV9 1468 aa29.58■■■□□ 2.33
SLC38A1-208ENST00000550173 PRAG1Q86YV5 1406 aa29.58■■■□□ 2.33
SLC38A1-208ENST00000550173 LRRC59Q96AG4 307 aaKnown RBP29.58■■■□□ 2.33
SLC38A1-208ENST00000550173 SPATA31E1Q6ZUB1 1445 aa29.57■■■□□ 2.32
SLC38A1-208ENST00000550173 ACIN1Q9UKV3 1341 aaKnown RBP29.56■■■□□ 2.32
SLC38A1-208ENST00000550173 ANKRD30BQ9BXX2 1392 aa29.55■■■□□ 2.32
SLC38A1-208ENST00000550173 ZNF772Q68DY9 489 aaPredicted RBP29.55■■■□□ 2.32
SLC38A1-208ENST00000550173 IFT172Q9UG01 1749 aa29.51■■■□□ 2.32
SLC38A1-208ENST00000550173 ORAI2Q96SN7 254 aa29.51■■■□□ 2.31
SLC38A1-208ENST00000550173 STK26Q9P289 416 aa29.5■■■□□ 2.31
SLC38A1-208ENST00000550173 PNPLA6Q8IY17 1366 aa29.48■■■□□ 2.31
SLC38A1-208ENST00000550173 LRPPRCP42704 1394 aaKnown RBP29.45■■■□□ 2.31
SLC38A1-208ENST00000550173 TMEM132EQ6IEE7 984 aa29.45■■■□□ 2.31
SLC38A1-208ENST00000550173 LAMC1P11047 1609 aa29.44■■■□□ 2.3
SLC38A1-208ENST00000550173 RAB3GAP2Q9H2M9 1393 aa29.43■■■□□ 2.3
SLC38A1-208ENST00000550173 WAPLQ7Z5K2 1190 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms