RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
CALCOCO1-215ENST00000549688 MYO5BQ9ULV0 1848 aa10.21□□□□□ -0.77
CALCOCO1-215ENST00000549688 DCAF11Q8TEB1 546 aa10.21□□□□□ -0.77
CALCOCO1-215ENST00000549688 LAMC1P11047 1609 aa10.21□□□□□ -0.78
CALCOCO1-215ENST00000549688 KIAA1210Q9ULL0 1709 aa10.21□□□□□ -0.78
CALCOCO1-215ENST00000549688 SLIT1O75093 1534 aa10.2□□□□□ -0.78
CALCOCO1-215ENST00000549688 PPP1R15AO75807 674 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO1-215ENST00000549688 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
CALCOCO1-215ENST00000549688 NEXMIFQ5QGS0 1516 aa10.2□□□□□ -0.78
CALCOCO1-215ENST00000549688 KDM4FA0A1W2PPD8 638 aa10.19□□□□□ -0.78
CALCOCO1-215ENST00000549688 NRXN1Q9ULB1 1477 aa10.18□□□□□ -0.78
CALCOCO1-215ENST00000549688 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
CALCOCO1-215ENST00000549688 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
CALCOCO1-215ENST00000549688 PLPPR3Q6T4P5 718 aa10.18□□□□□ -0.78
CALCOCO1-215ENST00000549688 EID1Q9Y6B2 187 aa10.18□□□□□ -0.78
CALCOCO1-215ENST00000549688 ARHGAP23Q9P227 1491 aa10.17□□□□□ -0.78
CALCOCO1-215ENST00000549688 RIMS2Q9UQ26 1411 aa10.17□□□□□ -0.78
CALCOCO1-215ENST00000549688 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
CALCOCO1-215ENST00000549688 PIK3C2GO75747 1445 aa10.16□□□□□ -0.78
CALCOCO1-215ENST00000549688 TRPM1Q7Z4N2 1603 aa10.15□□□□□ -0.78
CALCOCO1-215ENST00000549688 POLR1AO95602 1720 aaPredicted RBP10.15□□□□□ -0.78
CALCOCO1-215ENST00000549688 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
CALCOCO1-215ENST00000549688 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
CALCOCO1-215ENST00000549688 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
CALCOCO1-215ENST00000549688 KDM2AQ9Y2K7 1162 aa10.14□□□□□ -0.79
CALCOCO1-215ENST00000549688 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
CALCOCO1-215ENST00000549688 ANKLE2Q86XL3 938 aa10.13□□□□□ -0.79
CALCOCO1-215ENST00000549688 ROCK2O75116 1388 aaKnown RBP10.13□□□□□ -0.79
CALCOCO1-215ENST00000549688 TXNDC2Q86VQ3 553 aa10.12□□□□□ -0.79
CALCOCO1-215ENST00000549688 EIF3AQ14152 1382 aaKnown RBP10.12□□□□□ -0.79
CALCOCO1-215ENST00000549688 GPRASP1Q5JY77 1395 aa10.12□□□□□ -0.79
CALCOCO1-215ENST00000549688 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 ADGRF5Q8IZF2 1346 aa10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 C14orf93Q9H972 538 aaKnown RBP10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 ALKQ9UM73 1620 aa10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 MED14O60244 1454 aa10.1□□□□□ -0.79
CALCOCO1-215ENST00000549688 IQGAP1P46940 1657 aa10.09□□□□□ -0.79
CALCOCO1-215ENST00000549688 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
CALCOCO1-215ENST00000549688 CARD11Q9BXL7 1154 aa10.09□□□□□ -0.79
CALCOCO1-215ENST00000549688 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
CALCOCO1-215ENST00000549688 NRXN3Q9Y4C0 1643 aa10.08□□□□□ -0.8
CALCOCO1-215ENST00000549688 BCANQ96GW7 911 aa10.08□□□□□ -0.8
CALCOCO1-215ENST00000549688 SETD1AO15047 1707 aaKnown RBP10.07□□□□□ -0.8
CALCOCO1-215ENST00000549688 ADGRB1O14514 1584 aa10.07□□□□□ -0.8
CALCOCO1-215ENST00000549688 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
CALCOCO1-215ENST00000549688 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
CALCOCO1-215ENST00000549688 LTKP29376 864 aa10.06□□□□□ -0.8
CALCOCO1-215ENST00000549688 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO1-215ENST00000549688 TBX22Q9Y458 520 aa10.06□□□□□ -0.8
CALCOCO1-215ENST00000549688 DMRT2Q9Y5R5 561 aa10.06□□□□□ -0.8
CALCOCO1-215ENST00000549688 KNDC1Q76NI1 1749 aa10.06□□□□□ -0.8
CALCOCO1-215ENST00000549688 USP47Q96K76 1375 aa10.05□□□□□ -0.8
CALCOCO1-215ENST00000549688 CFAP70Q5T0N1 1121 aa10.05□□□□□ -0.8
CALCOCO1-215ENST00000549688 DLC1Q96QB1 1528 aa10.05□□□□□ -0.8
CALCOCO1-215ENST00000549688 ADAMTS13Q76LX8 1427 aa10.05□□□□□ -0.8
CALCOCO1-215ENST00000549688 YTHDC2Q9H6S0 1430 aaKnown RBP10.04□□□□□ -0.8
CALCOCO1-215ENST00000549688 LRPPRCP42704 1394 aaKnown RBP10.03□□□□□ -0.8
CALCOCO1-215ENST00000549688 ABCC11Q96J66 1382 aa10.03□□□□□ -0.8
CALCOCO1-215ENST00000549688 TECPR2O15040 1411 aa10.03□□□□□ -0.8
CALCOCO1-215ENST00000549688 SIRT1Q96EB6 747 aa10.03□□□□□ -0.8
CALCOCO1-215ENST00000549688 CPS1P31327 1500 aa10.02□□□□□ -0.8
CALCOCO1-215ENST00000549688 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.8
CALCOCO1-215ENST00000549688 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.8
CALCOCO1-215ENST00000549688 FAM135BQ49AJ0 1406 aa10.02□□□□□ -0.81
CALCOCO1-215ENST00000549688 NBPF1Q3BBV0 1214 aa10.02□□□□□ -0.81
CALCOCO1-215ENST00000549688 ASXL1Q8IXJ9 1541 aa10.02□□□□□ -0.81
CALCOCO1-215ENST00000549688 STRCQ7RTU9 1775 aa10.01□□□□□ -0.81
CALCOCO1-215ENST00000549688 PTCH1Q13635 1447 aa10.01□□□□□ -0.81
CALCOCO1-215ENST00000549688 CHD2O14647 1828 aaKnown RBP10.01□□□□□ -0.81
CALCOCO1-215ENST00000549688 XRN1Q8IZH2 1706 aaKnown RBP10.01□□□□□ -0.81
CALCOCO1-215ENST00000549688 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
CALCOCO1-215ENST00000549688 CDCA8Q53HL2 280 aa10□□□□□ -0.81
CALCOCO1-215ENST00000549688 CENPJQ9HC77 1338 aaPredicted RBP10□□□□□ -0.81
CALCOCO1-215ENST00000549688 NWD1Q149M9 1564 aa10□□□□□ -0.81
CALCOCO1-215ENST00000549688 METP08581 1390 aa10□□□□□ -0.81
CALCOCO1-215ENST00000549688 QRICH2Q9H0J4 1663 aa9.99□□□□□ -0.81
CALCOCO1-215ENST00000549688 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
CALCOCO1-215ENST00000549688 HSPA2P54652 639 aa9.99□□□□□ -0.81
CALCOCO1-215ENST00000549688 SLC26A8Q96RN1 970 aa9.99□□□□□ -0.81
CALCOCO1-215ENST00000549688 NCKAP5LQ9HCH0 1330 aa9.99□□□□□ -0.81
CALCOCO1-215ENST00000549688 ZNF316A6NFI3 1004 aaPredicted RBP9.98□□□□□ -0.81
CALCOCO1-215ENST00000549688 TMF1P82094 1093 aa9.98□□□□□ -0.81
CALCOCO1-215ENST00000549688 TMEM132EQ6IEE7 984 aa9.98□□□□□ -0.81
CALCOCO1-215ENST00000549688 POGKQ9P215 609 aa9.98□□□□□ -0.81
CALCOCO1-215ENST00000549688 TRAK1Q9UPV9 953 aa9.98□□□□□ -0.81
CALCOCO1-215ENST00000549688 ST20-MTHFSA0A0A6YYL1 179 aa9.97□□□□□ -0.81
CALCOCO1-215ENST00000549688 KCNA6P17658 529 aa9.97□□□□□ -0.81
CALCOCO1-215ENST00000549688 AMOTL2Q9Y2J4 779 aa9.97□□□□□ -0.81
CALCOCO1-215ENST00000549688 STK26Q9P289 416 aa9.96□□□□□ -0.82
CALCOCO1-215ENST00000549688 NCOA3Q9Y6Q9 1424 aa9.96□□□□□ -0.82
CALCOCO1-215ENST00000549688 ADGRB2O60241 1585 aa9.96□□□□□ -0.82
CALCOCO1-215ENST00000549688 PUS7Q96PZ0 661 aaKnown RBP9.95□□□□□ -0.82
CALCOCO1-215ENST00000549688 PRAM1Q96QH2 718 aa9.95□□□□□ -0.82
CALCOCO1-215ENST00000549688 EVC2Q86UK5 1308 aa9.95□□□□□ -0.82
CALCOCO1-215ENST00000549688 PTPRUQ92729 1446 aa9.94□□□□□ -0.82
CALCOCO1-215ENST00000549688 SENP3Q9H4L4 574 aaPredicted RBP9.94□□□□□ -0.82
CALCOCO1-215ENST00000549688 ROBO2Q9HCK4 1378 aa9.93□□□□□ -0.82
CALCOCO1-215ENST00000549688 TESK2Q96S53 571 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms