RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 ADGRL2O95490 1459 aa15.38■□□□□ 0.05
CALCOCO1-212ENST00000549173 SLAIN2Q9P270 581 aa15.37■□□□□ 0.05
CALCOCO1-212ENST00000549173 JCADQ9P266 1359 aa15.36■□□□□ 0.05
CALCOCO1-212ENST00000549173 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
CALCOCO1-212ENST00000549173 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
CALCOCO1-212ENST00000549173 HDGFP51858 240 aaKnown RBP15.36■□□□□ 0.05
CALCOCO1-212ENST00000549173 APLP2Q06481 763 aa15.36■□□□□ 0.05
CALCOCO1-212ENST00000549173 CHD2O14647 1828 aaKnown RBP15.35■□□□□ 0.05
CALCOCO1-212ENST00000549173 PHLPP1O60346 1717 aa15.34■□□□□ 0.05
CALCOCO1-212ENST00000549173 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
CALCOCO1-212ENST00000549173 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
CALCOCO1-212ENST00000549173 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
CALCOCO1-212ENST00000549173 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
CALCOCO1-212ENST00000549173 BCANQ96GW7 911 aa15.31■□□□□ 0.04
CALCOCO1-212ENST00000549173 SPATA31A6Q5VVP1 1343 aa15.31■□□□□ 0.04
CALCOCO1-212ENST00000549173 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
CALCOCO1-212ENST00000549173 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
CALCOCO1-212ENST00000549173 TMEM131LA2VDJ0 1609 aa15.31■□□□□ 0.04
CALCOCO1-212ENST00000549173 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
CALCOCO1-212ENST00000549173 PIK3R4Q99570 1358 aa15.3■□□□□ 0.04
CALCOCO1-212ENST00000549173 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
CALCOCO1-212ENST00000549173 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
CALCOCO1-212ENST00000549173 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
CALCOCO1-212ENST00000549173 AHDC1Q5TGY3 1603 aaPredicted RBP15.28■□□□□ 0.04
CALCOCO1-212ENST00000549173 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.04
CALCOCO1-212ENST00000549173 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
CALCOCO1-212ENST00000549173 ZNF772Q68DY9 489 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO1-212ENST00000549173 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
CALCOCO1-212ENST00000549173 UNC13BO14795 1591 aa15.26■□□□□ 0.03
CALCOCO1-212ENST00000549173 ADAMTS13Q76LX8 1427 aa15.26■□□□□ 0.03
CALCOCO1-212ENST00000549173 SHPRHQ149N8 1683 aa15.25■□□□□ 0.03
CALCOCO1-212ENST00000549173 SETD1AO15047 1707 aaKnown RBP15.25■□□□□ 0.03
CALCOCO1-212ENST00000549173 LRP6O75581 1613 aa15.25■□□□□ 0.03
CALCOCO1-212ENST00000549173 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.23■□□□□ 0.03
CALCOCO1-212ENST00000549173 ATF3P18847 181 aa15.22■□□□□ 0.03
CALCOCO1-212ENST00000549173 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
CALCOCO1-212ENST00000549173 DCCP43146 1447 aa15.22■□□□□ 0.03
CALCOCO1-212ENST00000549173 TRPM2O94759 1503 aa15.22■□□□□ 0.03
CALCOCO1-212ENST00000549173 E9PCH4 1651 aa15.21■□□□□ 0.03
CALCOCO1-212ENST00000549173 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
CALCOCO1-212ENST00000549173 FAM50AQ14320 339 aaKnown RBP15.2■□□□□ 0.02
CALCOCO1-212ENST00000549173 MEX3CQ5U5Q3 659 aaKnown RBP15.2■□□□□ 0.02
CALCOCO1-212ENST00000549173 ROCK1Q13464 1354 aa15.2■□□□□ 0.02
CALCOCO1-212ENST00000549173 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
CALCOCO1-212ENST00000549173 UPF1Q92900 1129 aaKnown RBP eCLIP15.19■□□□□ 0.02
CALCOCO1-212ENST00000549173 CHGAP10645 457 aaKnown RBP15.17■□□□□ 0.02
CALCOCO1-212ENST00000549173 BRINP3Q76B58 766 aa15.17■□□□□ 0.02
CALCOCO1-212ENST00000549173 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
CALCOCO1-212ENST00000549173 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
CALCOCO1-212ENST00000549173 RXRBP28702 533 aa15.16■□□□□ 0.02
CALCOCO1-212ENST00000549173 PTPRUQ92729 1446 aa15.16■□□□□ 0.02
CALCOCO1-212ENST00000549173 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
CALCOCO1-212ENST00000549173 XRN1Q8IZH2 1706 aaKnown RBP15.15■□□□□ 0.02
CALCOCO1-212ENST00000549173 ASXL1Q8IXJ9 1541 aa15.15■□□□□ 0.02
CALCOCO1-212ENST00000549173 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
CALCOCO1-212ENST00000549173 MST1RQ04912 1400 aa15.13■□□□□ 0.01
CALCOCO1-212ENST00000549173 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-212ENST00000549173 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
CALCOCO1-212ENST00000549173 NRXN3Q9Y4C0 1643 aa15.13■□□□□ 0.01
CALCOCO1-212ENST00000549173 NUP155O75694 1391 aa15.11■□□□□ 0.01
CALCOCO1-212ENST00000549173 LRRC59Q96AG4 307 aaKnown RBP15.11■□□□□ 0.01
CALCOCO1-212ENST00000549173 AFF2P51816 1311 aa15.1■□□□□ 0.01
CALCOCO1-212ENST00000549173 ADGRL3Q9HAR2 1447 aa15.09■□□□□ 0.01
CALCOCO1-212ENST00000549173 NUTM2BA6NNL0 878 aaPredicted RBP15.08■□□□□ 0
CALCOCO1-212ENST00000549173 NUTM2EB1AL46 878 aaPredicted RBP15.08■□□□□ 0
CALCOCO1-212ENST00000549173 NUTM2AQ8IVF1 878 aaPredicted RBP15.08■□□□□ 0
CALCOCO1-212ENST00000549173 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
CALCOCO1-212ENST00000549173 LAMC1P11047 1609 aa15.06■□□□□ 0
CALCOCO1-212ENST00000549173 RBM6P78332 1123 aaKnown RBP15.06■□□□□ 0
CALCOCO1-212ENST00000549173 METP08581 1390 aa15.06■□□□□ 0
CALCOCO1-212ENST00000549173 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
CALCOCO1-212ENST00000549173 RGS12O14924 1447 aa15.04■□□□□ -0
CALCOCO1-212ENST00000549173 QTRT2Q9H974 415 aaKnown RBP15.03■□□□□ -0
CALCOCO1-212ENST00000549173 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
CALCOCO1-212ENST00000549173 NEXMIFQ5QGS0 1516 aa15.02■□□□□ -0
CALCOCO1-212ENST00000549173 PRAG1Q86YV5 1406 aa15.02■□□□□ -0
CALCOCO1-212ENST00000549173 ZNF326Q5BKZ1 582 aaKnown RBP15.02■□□□□ -0
CALCOCO1-212ENST00000549173 NGLY1Q96IV0 654 aa15.02■□□□□ -0
CALCOCO1-212ENST00000549173 C8orf37Q96NL8 207 aa15.02■□□□□ -0
CALCOCO1-212ENST00000549173 C1orf167Q5SNV9 1468 aa15.01□□□□□ -0.01
CALCOCO1-212ENST00000549173 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
CALCOCO1-212ENST00000549173 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
CALCOCO1-212ENST00000549173 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
CALCOCO1-212ENST00000549173 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
CALCOCO1-212ENST00000549173 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
CALCOCO1-212ENST00000549173 KIF1BO60333 1816 aa14.96□□□□□ -0.01
CALCOCO1-212ENST00000549173 COL22A1Q8NFW1 1626 aaPredicted RBP14.96□□□□□ -0.01
CALCOCO1-212ENST00000549173 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.01
CALCOCO1-212ENST00000549173 FOXD1Q16676 465 aa14.96□□□□□ -0.01
CALCOCO1-212ENST00000549173 FNBP4Q8N3X1 1017 aaPredicted RBP14.96□□□□□ -0.01
CALCOCO1-212ENST00000549173 TRPC5Q9UL62 973 aaPredicted RBP14.96□□□□□ -0.01
CALCOCO1-212ENST00000549173 RPGRIP1LQ68CZ1 1315 aa14.94□□□□□ -0.02
CALCOCO1-212ENST00000549173 HFM1A2PYH4 1435 aa14.94□□□□□ -0.02
CALCOCO1-212ENST00000549173 ADAMTS2O95450 1211 aa14.94□□□□□ -0.02
CALCOCO1-212ENST00000549173 USP21Q9UK80 565 aa14.94□□□□□ -0.02
CALCOCO1-212ENST00000549173 ROBO2Q9HCK4 1378 aa14.94□□□□□ -0.02
CALCOCO1-212ENST00000549173 ITGAEP38570 1179 aa14.93□□□□□ -0.02
CALCOCO1-212ENST00000549173 ATRNO75882 1429 aa14.92□□□□□ -0.02
CALCOCO1-212ENST00000549173 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
CALCOCO1-212ENST00000549173 ORAI2Q96SN7 254 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms