RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 STAC3Q96MF2 364 aa16.19■□□□□ 0.18
SCRN3-212ENST00000548868 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
SCRN3-212ENST00000548868 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
SCRN3-212ENST00000548868 RGL3Q3MIN7 710 aa16.18■□□□□ 0.18
SCRN3-212ENST00000548868 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
SCRN3-212ENST00000548868 UHRF1BP1Q6BDS2 1440 aa16.17■□□□□ 0.18
SCRN3-212ENST00000548868 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
SCRN3-212ENST00000548868 MYOM2P54296 1465 aa16.16■□□□□ 0.18
SCRN3-212ENST00000548868 PPP1R15AO75807 674 aaPredicted RBP16.15■□□□□ 0.18
SCRN3-212ENST00000548868 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
SCRN3-212ENST00000548868 SLIT1O75093 1534 aa16.13■□□□□ 0.17
SCRN3-212ENST00000548868 THEMISQ8N1K5 641 aaPredicted RBP16.13■□□□□ 0.17
SCRN3-212ENST00000548868 ZFYVE9O95405 1425 aa16.12■□□□□ 0.17
SCRN3-212ENST00000548868 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
SCRN3-212ENST00000548868 RIMS2Q9UQ26 1411 aa16.12■□□□□ 0.17
SCRN3-212ENST00000548868 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
SCRN3-212ENST00000548868 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
SCRN3-212ENST00000548868 NRXN1Q9ULB1 1477 aa16.11■□□□□ 0.17
SCRN3-212ENST00000548868 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
SCRN3-212ENST00000548868 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
SCRN3-212ENST00000548868 PRAG1Q86YV5 1406 aa16.1■□□□□ 0.17
SCRN3-212ENST00000548868 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCRN3-212ENST00000548868 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
SCRN3-212ENST00000548868 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
SCRN3-212ENST00000548868 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.17
SCRN3-212ENST00000548868 LAMC1P11047 1609 aa16.08■□□□□ 0.16
SCRN3-212ENST00000548868 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
SCRN3-212ENST00000548868 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
SCRN3-212ENST00000548868 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
SCRN3-212ENST00000548868 ADGRF5Q8IZF2 1346 aa16.05■□□□□ 0.16
SCRN3-212ENST00000548868 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
SCRN3-212ENST00000548868 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
SCRN3-212ENST00000548868 RALGAPBQ86X10 1494 aa16.05■□□□□ 0.16
SCRN3-212ENST00000548868 LMTK3Q96Q04 1460 aa16.04■□□□□ 0.16
SCRN3-212ENST00000548868 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
SCRN3-212ENST00000548868 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
SCRN3-212ENST00000548868 IQGAP1P46940 1657 aa16.02■□□□□ 0.16
SCRN3-212ENST00000548868 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
SCRN3-212ENST00000548868 TXNDC2Q86VQ3 553 aa16.02■□□□□ 0.16
SCRN3-212ENST00000548868 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.15
SCRN3-212ENST00000548868 NRXN3Q9Y4C0 1643 aa16.02■□□□□ 0.15
SCRN3-212ENST00000548868 SETD1AO15047 1707 aaKnown RBP16.01■□□□□ 0.15
SCRN3-212ENST00000548868 LTKP29376 864 aa16■□□□□ 0.15
SCRN3-212ENST00000548868 ANKLE2Q86XL3 938 aa16■□□□□ 0.15
SCRN3-212ENST00000548868 ALKQ9UM73 1620 aa16■□□□□ 0.15
SCRN3-212ENST00000548868 DIP2AQ14689 1571 aa15.99■□□□□ 0.15
SCRN3-212ENST00000548868 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
SCRN3-212ENST00000548868 MED14O60244 1454 aa15.98■□□□□ 0.15
SCRN3-212ENST00000548868 ROCK2O75116 1388 aaKnown RBP15.98■□□□□ 0.15
SCRN3-212ENST00000548868 GPRASP1Q5JY77 1395 aa15.98■□□□□ 0.15
SCRN3-212ENST00000548868 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.15
SCRN3-212ENST00000548868 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
SCRN3-212ENST00000548868 ADAMTS13Q76LX8 1427 aa15.95■□□□□ 0.14
SCRN3-212ENST00000548868 STRCQ7RTU9 1775 aa15.94■□□□□ 0.14
SCRN3-212ENST00000548868 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
SCRN3-212ENST00000548868 NBPF1Q3BBV0 1214 aa15.94■□□□□ 0.14
SCRN3-212ENST00000548868 ASXL1Q8IXJ9 1541 aa15.93■□□□□ 0.14
SCRN3-212ENST00000548868 BCANQ96GW7 911 aa15.93■□□□□ 0.14
SCRN3-212ENST00000548868 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
SCRN3-212ENST00000548868 HSPA2P54652 639 aa15.92■□□□□ 0.14
SCRN3-212ENST00000548868 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
SCRN3-212ENST00000548868 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
SCRN3-212ENST00000548868 KNDC1Q76NI1 1749 aa15.91■□□□□ 0.14
SCRN3-212ENST00000548868 NCKAP5LQ9HCH0 1330 aa15.91■□□□□ 0.14
SCRN3-212ENST00000548868 PIK3R4Q99570 1358 aa15.89■□□□□ 0.13
SCRN3-212ENST00000548868 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
SCRN3-212ENST00000548868 ARHGEF28Q8N1W1 1705 aaKnown RBP15.89■□□□□ 0.13
SCRN3-212ENST00000548868 YTHDC2Q9H6S0 1430 aaKnown RBP15.88■□□□□ 0.13
SCRN3-212ENST00000548868 USP47Q96K76 1375 aa15.88■□□□□ 0.13
SCRN3-212ENST00000548868 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCRN3-212ENST00000548868 EIF3AQ14152 1382 aaKnown RBP15.88■□□□□ 0.13
SCRN3-212ENST00000548868 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
SCRN3-212ENST00000548868 METP08581 1390 aa15.87■□□□□ 0.13
SCRN3-212ENST00000548868 LRPPRCP42704 1394 aaKnown RBP15.87■□□□□ 0.13
SCRN3-212ENST00000548868 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
SCRN3-212ENST00000548868 DLC1Q96QB1 1528 aa15.86■□□□□ 0.13
SCRN3-212ENST00000548868 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
SCRN3-212ENST00000548868 CPS1P31327 1500 aa15.85■□□□□ 0.13
SCRN3-212ENST00000548868 TECPR2O15040 1411 aa15.85■□□□□ 0.13
SCRN3-212ENST00000548868 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
SCRN3-212ENST00000548868 HSPA5P11021 654 aaKnown RBP15.83■□□□□ 0.13
SCRN3-212ENST00000548868 NWD1Q149M9 1564 aa15.83■□□□□ 0.12
SCRN3-212ENST00000548868 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
SCRN3-212ENST00000548868 PTPRUQ92729 1446 aa15.82■□□□□ 0.12
SCRN3-212ENST00000548868 SIRT1Q96EB6 747 aa15.82■□□□□ 0.12
SCRN3-212ENST00000548868 TRAK1Q9UPV9 953 aa15.82■□□□□ 0.12
SCRN3-212ENST00000548868 STK26Q9P289 416 aa15.81■□□□□ 0.12
SCRN3-212ENST00000548868 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
SCRN3-212ENST00000548868 FAM135BQ49AJ0 1406 aa15.8■□□□□ 0.12
SCRN3-212ENST00000548868 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
SCRN3-212ENST00000548868 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
SCRN3-212ENST00000548868 CENPJQ9HC77 1338 aaPredicted RBP15.79■□□□□ 0.12
SCRN3-212ENST00000548868 SBNO2Q9Y2G9 1366 aa15.79■□□□□ 0.12
SCRN3-212ENST00000548868 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
SCRN3-212ENST00000548868 KCNA6P17658 529 aa15.78■□□□□ 0.12
SCRN3-212ENST00000548868 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
SCRN3-212ENST00000548868 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
SCRN3-212ENST00000548868 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
SCRN3-212ENST00000548868 ROBO2Q9HCK4 1378 aa15.76■□□□□ 0.11
SCRN3-212ENST00000548868 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms