RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.94■■■□□ 2.38
NPAS3-206ENST00000548645 TRMT2AQ8IZ69 625 aaKnown RBP29.92■■■□□ 2.38
NPAS3-206ENST00000548645 AMER1Q5JTC6 1135 aaPredicted RBP29.92■■■□□ 2.38
NPAS3-206ENST00000548645 RNF17Q9BXT8 1623 aaKnown RBP29.91■■■□□ 2.38
NPAS3-206ENST00000548645 ATP10AO60312 1499 aa29.89■■■□□ 2.38
NPAS3-206ENST00000548645 PIK3C2GO75747 1445 aa29.89■■■□□ 2.38
NPAS3-206ENST00000548645 CDCA8Q53HL2 280 aa29.89■■■□□ 2.38
NPAS3-206ENST00000548645 IQGAP3Q86VI3 1631 aa29.89■■■□□ 2.38
NPAS3-206ENST00000548645 PREX2Q70Z35 1606 aa29.89■■■□□ 2.37
NPAS3-206ENST00000548645 NKTRP30414 1462 aaKnown RBP29.88■■■□□ 2.37
NPAS3-206ENST00000548645 MAST1Q9Y2H9 1570 aa29.87■■■□□ 2.37
NPAS3-206ENST00000548645 CDC42BPBQ9Y5S2 1711 aa29.87■■■□□ 2.37
NPAS3-206ENST00000548645 FAM43AQ8N2R8 423 aa29.86■■■□□ 2.37
NPAS3-206ENST00000548645 ASXL1Q8IXJ9 1541 aa29.84■■■□□ 2.37
NPAS3-206ENST00000548645 SYNMO15061 1565 aa29.83■■■□□ 2.37
NPAS3-206ENST00000548645 VIRMAQ69YN4 1812 aaKnown RBP29.82■■■□□ 2.36
NPAS3-206ENST00000548645 ABCC2Q92887 1545 aa29.81■■■□□ 2.36
NPAS3-206ENST00000548645 SYCP2Q9BX26 1530 aa29.81■■■□□ 2.36
NPAS3-206ENST00000548645 E9PSI1 815 aa29.81■■■□□ 2.36
NPAS3-206ENST00000548645 NPC1L1Q9UHC9 1359 aa29.81■■■□□ 2.36
NPAS3-206ENST00000548645 BECN1Q14457 450 aa29.81■■■□□ 2.36
NPAS3-206ENST00000548645 USP19O94966 1318 aa29.8■■■□□ 2.36
NPAS3-206ENST00000548645 CGNL1Q0VF96 1302 aa29.8■■■□□ 2.36
NPAS3-206ENST00000548645 BCAR3O75815 825 aa29.8■■■□□ 2.36
NPAS3-206ENST00000548645 CCDC146Q8IYE0 955 aa29.8■■■□□ 2.36
NPAS3-206ENST00000548645 MAPK8IP3Q9UPT6 1336 aa29.8■■■□□ 2.36
NPAS3-206ENST00000548645 APAF1O14727 1248 aa29.78■■■□□ 2.36
NPAS3-206ENST00000548645 SPINK5Q9NQ38 1064 aaPredicted RBP29.78■■■□□ 2.36
NPAS3-206ENST00000548645 IGHDP01880 384 aa29.78■■■□□ 2.36
NPAS3-206ENST00000548645 PDE3AQ14432 1141 aa29.77■■■□□ 2.36
NPAS3-206ENST00000548645 NGEFQ8N5V2 710 aa29.77■■■□□ 2.36
NPAS3-206ENST00000548645 PLXNC1O60486 1568 aa29.77■■■□□ 2.36
NPAS3-206ENST00000548645 RSPH6AQ9H0K4 717 aa29.77■■■□□ 2.36
NPAS3-206ENST00000548645 IQGAP1P46940 1657 aa29.77■■■□□ 2.36
NPAS3-206ENST00000548645 NINLQ9Y2I6 1382 aa29.76■■■□□ 2.35
NPAS3-206ENST00000548645 EIF5BO60841 1220 aaKnown RBP29.75■■■□□ 2.35
NPAS3-206ENST00000548645 SCAF11Q99590 1463 aaKnown RBP29.72■■■□□ 2.35
NPAS3-206ENST00000548645 ARHGAP5Q13017 1502 aa29.72■■■□□ 2.35
NPAS3-206ENST00000548645 DUOX2Q9NRD8 1548 aa29.72■■■□□ 2.35
NPAS3-206ENST00000548645 MADDQ8WXG6 1647 aa29.72■■■□□ 2.35
NPAS3-206ENST00000548645 CLUAP1Q96AJ1 413 aa29.72■■■□□ 2.35
NPAS3-206ENST00000548645 UBE2Q2Q8WVN8 375 aa29.71■■■□□ 2.35
NPAS3-206ENST00000548645 POGKQ9P215 609 aa29.69■■■□□ 2.34
NPAS3-206ENST00000548645 STAC3Q96MF2 364 aa29.68■■■□□ 2.34
NPAS3-206ENST00000548645 CENPJQ9HC77 1338 aaPredicted RBP29.67■■■□□ 2.34
NPAS3-206ENST00000548645 SEC24BO95487 1268 aa29.67■■■□□ 2.34
NPAS3-206ENST00000548645 CANXP27824 592 aaKnown RBP29.67■■■□□ 2.34
NPAS3-206ENST00000548645 SCAPERQ9BY12 1400 aa29.66■■■□□ 2.34
NPAS3-206ENST00000548645 L1TD1Q5T7N2 865 aaKnown RBP29.66■■■□□ 2.34
NPAS3-206ENST00000548645 SLKQ9H2G2 1235 aaPredicted RBP29.64■■■□□ 2.33
NPAS3-206ENST00000548645 MYOM1P52179 1685 aa29.64■■■□□ 2.33
NPAS3-206ENST00000548645 UPF2Q9HAU5 1272 aaKnown RBP29.63■■■□□ 2.33
NPAS3-206ENST00000548645 CHD1O14646 1710 aa29.63■■■□□ 2.33
NPAS3-206ENST00000548645 COG6Q9Y2V7 657 aa29.63■■■□□ 2.33
NPAS3-206ENST00000548645 NLRP1Q9C000 1473 aa29.62■■■□□ 2.33
NPAS3-206ENST00000548645 AAMPQ13685 434 aa29.61■■■□□ 2.33
NPAS3-206ENST00000548645 PANK1Q8TE04 598 aa29.61■■■□□ 2.33
NPAS3-206ENST00000548645 DMRT2Q9Y5R5 561 aa29.61■■■□□ 2.33
NPAS3-206ENST00000548645 TTC37Q6PGP7 1564 aa29.61■■■□□ 2.33
NPAS3-206ENST00000548645 PMFBP1Q8TBY8 1022 aa29.6■■■□□ 2.33
NPAS3-206ENST00000548645 ZMYM3Q14202 1370 aa29.59■■■□□ 2.33
NPAS3-206ENST00000548645 ANTXR1Q9H6X2 564 aa29.59■■■□□ 2.33
NPAS3-206ENST00000548645 SPHKAPQ2M3C7 1700 aa29.58■■■□□ 2.33
NPAS3-206ENST00000548645 SLC24A1O60721 1099 aa29.58■■■□□ 2.33
NPAS3-206ENST00000548645 KDM5AP29375 1690 aaKnown RBP29.57■■■□□ 2.32
NPAS3-206ENST00000548645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.57■■■□□ 2.32
NPAS3-206ENST00000548645 WWC1Q8IX03 1113 aa29.56■■■□□ 2.32
NPAS3-206ENST00000548645 TBC1D32Q96NH3 1257 aa29.54■■■□□ 2.32
NPAS3-206ENST00000548645 TRPM2O94759 1503 aa29.52■■■□□ 2.32
NPAS3-206ENST00000548645 POLR3AO14802 1390 aaPredicted RBP29.5■■■□□ 2.31
NPAS3-206ENST00000548645 CEP152O94986 1710 aa29.49■■■□□ 2.31
NPAS3-206ENST00000548645 TBC1D2Q9BYX2 928 aa29.49■■■□□ 2.31
NPAS3-206ENST00000548645 RARSP54136 660 aaKnown RBP29.48■■■□□ 2.31
NPAS3-206ENST00000548645 RRAGDQ9NQL2 400 aaPredicted RBP29.47■■■□□ 2.31
NPAS3-206ENST00000548645 PDZRN3Q9UPQ7 1066 aa29.46■■■□□ 2.31
NPAS3-206ENST00000548645 PTPRTO14522 1441 aa29.45■■■□□ 2.31
NPAS3-206ENST00000548645 CARD14Q9BXL6 1004 aa29.45■■■□□ 2.31
NPAS3-206ENST00000548645 PCDHB15Q9Y5E8 787 aa29.45■■■□□ 2.31
NPAS3-206ENST00000548645 KIAA1210Q9ULL0 1709 aa29.45■■■□□ 2.31
NPAS3-206ENST00000548645 RWDD1Q9H446 243 aaPredicted RBP29.44■■■□□ 2.3
NPAS3-206ENST00000548645 ERVK-7P63135 1459 aa29.43■■■□□ 2.3
NPAS3-206ENST00000548645 GOLGA6L3A6NEY3 463 aa29.43■■■□□ 2.3
NPAS3-206ENST00000548645 ERCC6L2Q5T890 1561 aa29.42■■■□□ 2.3
NPAS3-206ENST00000548645 CLTCL1P53675 1640 aa29.42■■■□□ 2.3
NPAS3-206ENST00000548645 RUNDC1Q96C34 613 aa29.4■■■□□ 2.3
NPAS3-206ENST00000548645 MCM4P33991 863 aa29.39■■■□□ 2.3
NPAS3-206ENST00000548645 RLBP1P12271 317 aa29.38■■■□□ 2.29
NPAS3-206ENST00000548645 WDR63Q8IWG1 891 aa29.38■■■□□ 2.29
NPAS3-206ENST00000548645 FSD2A1L4K1 749 aa29.38■■■□□ 2.29
NPAS3-206ENST00000548645 XRCC6P12956 609 aaKnown RBP eCLIP29.38■■■□□ 2.29
NPAS3-206ENST00000548645 EFCAB2Q5VUJ9 269 aa29.38■■■□□ 2.29
NPAS3-206ENST00000548645 NEUROD2Q15784 382 aa29.38■■■□□ 2.29
NPAS3-206ENST00000548645 PLCH2O75038 1416 aa29.36■■■□□ 2.29
NPAS3-206ENST00000548645 PHF23Q9BUL5 403 aaPredicted RBP29.35■■■□□ 2.29
NPAS3-206ENST00000548645 TCP11L2Q8N4U5 519 aa29.34■■■□□ 2.29
NPAS3-206ENST00000548645 RRP7AQ9Y3A4 280 aaKnown RBP29.34■■■□□ 2.29
NPAS3-206ENST00000548645 CHMP5Q9NZZ3 219 aa29.34■■■□□ 2.29
NPAS3-206ENST00000548645 CFAP70Q5T0N1 1121 aa29.33■■■□□ 2.29
NPAS3-206ENST00000548645 TNNQ9UQP3 1299 aa29.33■■■□□ 2.29
NPAS3-206ENST00000548645 MORC1Q86VD1 984 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms