RNA–Protein interactions for RNA: ENST00000548265.1

PACS2-207, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-207ENST00000548265 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
PACS2-207ENST00000548265 RPGRIP1LQ68CZ1 1315 aa22.07■■□□□ 1.12
PACS2-207ENST00000548265 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
PACS2-207ENST00000548265 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
PACS2-207ENST00000548265 TMEM131LA2VDJ0 1609 aa22.06■■□□□ 1.12
PACS2-207ENST00000548265 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
PACS2-207ENST00000548265 MYO5BQ9ULV0 1848 aa22.04■■□□□ 1.12
PACS2-207ENST00000548265 MYO3AQ8NEV4 1616 aa22.04■■□□□ 1.12
PACS2-207ENST00000548265 HDGFP51858 240 aaKnown RBP22.03■■□□□ 1.12
PACS2-207ENST00000548265 A2ML1A8K2U0 1454 aa22■■□□□ 1.11
PACS2-207ENST00000548265 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
PACS2-207ENST00000548265 IFT172Q9UG01 1749 aa22■■□□□ 1.11
PACS2-207ENST00000548265 PPLO60437 1756 aa21.99■■□□□ 1.11
PACS2-207ENST00000548265 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
PACS2-207ENST00000548265 THEMISQ8N1K5 641 aaPredicted RBP21.98■■□□□ 1.11
PACS2-207ENST00000548265 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.98■■□□□ 1.11
PACS2-207ENST00000548265 MYOM2P54296 1465 aa21.97■■□□□ 1.11
PACS2-207ENST00000548265 CEP170BQ9Y4F5 1589 aaPredicted RBP21.97■■□□□ 1.11
PACS2-207ENST00000548265 ZNF142P52746 1687 aaPredicted RBP21.96■■□□□ 1.11
PACS2-207ENST00000548265 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
PACS2-207ENST00000548265 RIMS2Q9UQ26 1411 aa21.94■■□□□ 1.1
PACS2-207ENST00000548265 MED1Q15648 1581 aaPredicted RBP21.94■■□□□ 1.1
PACS2-207ENST00000548265 UBAP1LF5GYI3 381 aa21.93■■□□□ 1.1
PACS2-207ENST00000548265 PRAG1Q86YV5 1406 aa21.93■■□□□ 1.1
PACS2-207ENST00000548265 EID1Q9Y6B2 187 aa21.93■■□□□ 1.1
PACS2-207ENST00000548265 ZFYVE9O95405 1425 aa21.91■■□□□ 1.1
PACS2-207ENST00000548265 TMEM2Q9UHN6 1383 aa21.9■■□□□ 1.1
PACS2-207ENST00000548265 ZNF335Q9H4Z2 1342 aaPredicted RBP21.9■■□□□ 1.1
PACS2-207ENST00000548265 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
PACS2-207ENST00000548265 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
PACS2-207ENST00000548265 ADGRF5Q8IZF2 1346 aa21.87■■□□□ 1.09
PACS2-207ENST00000548265 KIAA1210Q9ULL0 1709 aa21.87■■□□□ 1.09
PACS2-207ENST00000548265 RALGAPBQ86X10 1494 aa21.87■■□□□ 1.09
PACS2-207ENST00000548265 SLIT1O75093 1534 aa21.86■■□□□ 1.09
PACS2-207ENST00000548265 NRXN1Q9ULB1 1477 aa21.86■■□□□ 1.09
PACS2-207ENST00000548265 TRPM1Q7Z4N2 1603 aa21.86■■□□□ 1.09
PACS2-207ENST00000548265 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
PACS2-207ENST00000548265 TXNDC2Q86VQ3 553 aa21.85■■□□□ 1.09
PACS2-207ENST00000548265 BCANQ96GW7 911 aa21.85■■□□□ 1.09
PACS2-207ENST00000548265 LAMC1P11047 1609 aa21.84■■□□□ 1.09
PACS2-207ENST00000548265 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.09
PACS2-207ENST00000548265 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
PACS2-207ENST00000548265 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
PACS2-207ENST00000548265 CARD11Q9BXL7 1154 aa21.82■■□□□ 1.08
PACS2-207ENST00000548265 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
PACS2-207ENST00000548265 SCAF11Q99590 1463 aaKnown RBP21.8■■□□□ 1.08
PACS2-207ENST00000548265 C14orf93Q9H972 538 aaKnown RBP21.79■■□□□ 1.08
PACS2-207ENST00000548265 PLEKHG1Q9ULL1 1385 aa21.78■■□□□ 1.08
PACS2-207ENST00000548265 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
PACS2-207ENST00000548265 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
PACS2-207ENST00000548265 LTKP29376 864 aa21.76■■□□□ 1.07
PACS2-207ENST00000548265 SETBP1Q9Y6X0 1596 aa21.76■■□□□ 1.07
PACS2-207ENST00000548265 GPRASP1Q5JY77 1395 aa21.75■■□□□ 1.07
PACS2-207ENST00000548265 HSPA1LP34931 641 aa21.75■■□□□ 1.07
PACS2-207ENST00000548265 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
PACS2-207ENST00000548265 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
PACS2-207ENST00000548265 CPS1P31327 1500 aa21.74■■□□□ 1.07
PACS2-207ENST00000548265 ALKQ9UM73 1620 aa21.73■■□□□ 1.07
PACS2-207ENST00000548265 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
PACS2-207ENST00000548265 IQGAP1P46940 1657 aa21.72■■□□□ 1.07
PACS2-207ENST00000548265 EIF3AQ14152 1382 aaKnown RBP21.72■■□□□ 1.07
PACS2-207ENST00000548265 USP47Q96K76 1375 aa21.71■■□□□ 1.07
PACS2-207ENST00000548265 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
PACS2-207ENST00000548265 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
PACS2-207ENST00000548265 NRXN3Q9Y4C0 1643 aa21.69■■□□□ 1.06
PACS2-207ENST00000548265 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
PACS2-207ENST00000548265 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
PACS2-207ENST00000548265 TOM1O60784 492 aa21.67■■□□□ 1.06
PACS2-207ENST00000548265 HSPA5P11021 654 aaKnown RBP21.67■■□□□ 1.06
PACS2-207ENST00000548265 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
PACS2-207ENST00000548265 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
PACS2-207ENST00000548265 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
PACS2-207ENST00000548265 ADGRB1O14514 1584 aa21.65■■□□□ 1.06
PACS2-207ENST00000548265 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
PACS2-207ENST00000548265 SETD1AO15047 1707 aaKnown RBP21.65■■□□□ 1.06
PACS2-207ENST00000548265 MED14O60244 1454 aa21.64■■□□□ 1.06
PACS2-207ENST00000548265 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
PACS2-207ENST00000548265 SLC26A8Q96RN1 970 aa21.63■■□□□ 1.05
PACS2-207ENST00000548265 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
PACS2-207ENST00000548265 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
PACS2-207ENST00000548265 TRAK1Q9UPV9 953 aa21.62■■□□□ 1.05
PACS2-207ENST00000548265 STK26Q9P289 416 aa21.61■■□□□ 1.05
PACS2-207ENST00000548265 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
PACS2-207ENST00000548265 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
PACS2-207ENST00000548265 PIK3R4Q99570 1358 aa21.6■■□□□ 1.05
PACS2-207ENST00000548265 ST20-MTHFSA0A0A6YYL1 179 aa21.59■■□□□ 1.05
PACS2-207ENST00000548265 METP08581 1390 aa21.59■■□□□ 1.05
PACS2-207ENST00000548265 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.05
PACS2-207ENST00000548265 KNDC1Q76NI1 1749 aa21.58■■□□□ 1.04
PACS2-207ENST00000548265 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
PACS2-207ENST00000548265 POGKQ9P215 609 aa21.57■■□□□ 1.04
PACS2-207ENST00000548265 ABCC11Q96J66 1382 aa21.57■■□□□ 1.04
PACS2-207ENST00000548265 ARHGEF28Q8N1W1 1705 aaKnown RBP21.57■■□□□ 1.04
PACS2-207ENST00000548265 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
PACS2-207ENST00000548265 AMOTL2Q9Y2J4 779 aa21.53■■□□□ 1.04
PACS2-207ENST00000548265 TMF1P82094 1093 aa21.52■■□□□ 1.04
PACS2-207ENST00000548265 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
PACS2-207ENST00000548265 QRICH2Q9H0J4 1663 aa21.52■■□□□ 1.04
PACS2-207ENST00000548265 CHD2O14647 1828 aaKnown RBP21.51■■□□□ 1.03
PACS2-207ENST00000548265 TECPR2O15040 1411 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms