RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 PHLPP1O60346 1717 aa24.81■■□□□ 1.56
SVOP-202ENST00000548229 PTPN23Q9H3S7 1636 aa24.81■■□□□ 1.56
SVOP-202ENST00000548229 NCOA3Q9Y6Q9 1424 aa24.8■■□□□ 1.56
SVOP-202ENST00000548229 APLP2Q06481 763 aa24.8■■□□□ 1.56
SVOP-202ENST00000548229 ZNF772Q68DY9 489 aaPredicted RBP24.8■■□□□ 1.56
SVOP-202ENST00000548229 SPATA31A6Q5VVP1 1343 aa24.8■■□□□ 1.56
SVOP-202ENST00000548229 PLEKHG1Q9ULL1 1385 aa24.78■■□□□ 1.56
SVOP-202ENST00000548229 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
SVOP-202ENST00000548229 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
SVOP-202ENST00000548229 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
SVOP-202ENST00000548229 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
SVOP-202ENST00000548229 CHIC2Q9UKJ5 165 aa24.76■■□□□ 1.55
SVOP-202ENST00000548229 TBX22Q9Y458 520 aa24.75■■□□□ 1.55
SVOP-202ENST00000548229 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
SVOP-202ENST00000548229 CADPS2Q86UW7 1296 aa24.73■■□□□ 1.55
SVOP-202ENST00000548229 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
SVOP-202ENST00000548229 CHD2O14647 1828 aaKnown RBP24.72■■□□□ 1.55
SVOP-202ENST00000548229 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
SVOP-202ENST00000548229 ZFYVE9O95405 1425 aa24.72■■□□□ 1.55
SVOP-202ENST00000548229 UPF1Q92900 1129 aaKnown RBP eCLIP24.71■■□□□ 1.55
SVOP-202ENST00000548229 COL16A1Q07092 1604 aaPredicted RBP24.71■■□□□ 1.55
SVOP-202ENST00000548229 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
SVOP-202ENST00000548229 ATF3P18847 181 aa24.7■■□□□ 1.54
SVOP-202ENST00000548229 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.54
SVOP-202ENST00000548229 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
SVOP-202ENST00000548229 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
SVOP-202ENST00000548229 TRIM52Q96A61 297 aa24.66■■□□□ 1.54
SVOP-202ENST00000548229 RXRBP28702 533 aa24.65■■□□□ 1.54
SVOP-202ENST00000548229 LRP6O75581 1613 aa24.64■■□□□ 1.54
SVOP-202ENST00000548229 ADGRL2O95490 1459 aa24.64■■□□□ 1.54
SVOP-202ENST00000548229 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.53
SVOP-202ENST00000548229 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
SVOP-202ENST00000548229 TMEM131LA2VDJ0 1609 aa24.61■■□□□ 1.53
SVOP-202ENST00000548229 CHGAP10645 457 aaKnown RBP24.61■■□□□ 1.53
SVOP-202ENST00000548229 SHPRHQ149N8 1683 aa24.61■■□□□ 1.53
SVOP-202ENST00000548229 DIP2AQ14689 1571 aa24.6■■□□□ 1.53
SVOP-202ENST00000548229 CDK12Q9NYV4 1490 aaPredicted RBP24.59■■□□□ 1.53
SVOP-202ENST00000548229 GCC2Q8IWJ2 1684 aa24.59■■□□□ 1.53
SVOP-202ENST00000548229 MYO5BQ9ULV0 1848 aa24.58■■□□□ 1.53
SVOP-202ENST00000548229 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.53
SVOP-202ENST00000548229 ADAMTS13Q76LX8 1427 aa24.58■■□□□ 1.53
SVOP-202ENST00000548229 SRCAPQ6ZRS2 3230 aa24.56■■□□□ 1.52
SVOP-202ENST00000548229 BRINP3Q76B58 766 aa24.55■■□□□ 1.52
SVOP-202ENST00000548229 AMOTL2Q9Y2J4 779 aa24.55■■□□□ 1.52
SVOP-202ENST00000548229 DCCP43146 1447 aa24.54■■□□□ 1.52
SVOP-202ENST00000548229 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
SVOP-202ENST00000548229 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
SVOP-202ENST00000548229 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
SVOP-202ENST00000548229 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
SVOP-202ENST00000548229 TRPM2O94759 1503 aa24.52■■□□□ 1.52
SVOP-202ENST00000548229 NUTM2DQ5VT03 806 aaPredicted RBP24.52■■□□□ 1.52
SVOP-202ENST00000548229 LRRC59Q96AG4 307 aaKnown RBP24.51■■□□□ 1.51
SVOP-202ENST00000548229 AFF2P51816 1311 aa24.5■■□□□ 1.51
SVOP-202ENST00000548229 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
SVOP-202ENST00000548229 RBM6P78332 1123 aaKnown RBP24.46■■□□□ 1.51
SVOP-202ENST00000548229 UNC13BO14795 1591 aa24.45■■□□□ 1.5
SVOP-202ENST00000548229 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.5
SVOP-202ENST00000548229 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
SVOP-202ENST00000548229 PTPRUQ92729 1446 aa24.43■■□□□ 1.5
SVOP-202ENST00000548229 E9PCH4 1651 aa24.41■■□□□ 1.5
SVOP-202ENST00000548229 C8orf37Q96NL8 207 aa24.41■■□□□ 1.5
SVOP-202ENST00000548229 FOXD1Q16676 465 aa24.4■■□□□ 1.5
SVOP-202ENST00000548229 NGLY1Q96IV0 654 aa24.4■■□□□ 1.5
SVOP-202ENST00000548229 MST1RQ04912 1400 aa24.4■■□□□ 1.5
SVOP-202ENST00000548229 ROCK1Q13464 1354 aa24.38■■□□□ 1.49
SVOP-202ENST00000548229 NHSL1Q5SYE7 1610 aa24.38■■□□□ 1.49
SVOP-202ENST00000548229 IQGAP3Q86VI3 1631 aa24.36■■□□□ 1.49
SVOP-202ENST00000548229 NUP155O75694 1391 aa24.36■■□□□ 1.49
SVOP-202ENST00000548229 RGS12O14924 1447 aa24.35■■□□□ 1.49
SVOP-202ENST00000548229 SETBP1Q9Y6X0 1596 aa24.35■■□□□ 1.49
SVOP-202ENST00000548229 PNPLA6Q8IY17 1366 aa24.35■■□□□ 1.49
SVOP-202ENST00000548229 XRN1Q8IZH2 1706 aaKnown RBP24.35■■□□□ 1.49
SVOP-202ENST00000548229 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.49
SVOP-202ENST00000548229 ADGRL3Q9HAR2 1447 aa24.33■■□□□ 1.49
SVOP-202ENST00000548229 ATAD2Q6PL18 1390 aa24.31■■□□□ 1.48
SVOP-202ENST00000548229 METP08581 1390 aa24.29■■□□□ 1.48
SVOP-202ENST00000548229 NRXN3Q9Y4C0 1643 aa24.28■■□□□ 1.48
SVOP-202ENST00000548229 ADAMTS2O95450 1211 aa24.28■■□□□ 1.48
SVOP-202ENST00000548229 DDX17Q92841 729 aaKnown RBP24.28■■□□□ 1.48
SVOP-202ENST00000548229 TRPC5Q9UL62 973 aaPredicted RBP24.26■■□□□ 1.47
SVOP-202ENST00000548229 USP21Q9UK80 565 aa24.25■■□□□ 1.47
SVOP-202ENST00000548229 ZRANB1Q9UGI0 708 aa24.24■■□□□ 1.47
SVOP-202ENST00000548229 SOS2Q07890 1332 aaPredicted RBP24.23■■□□□ 1.47
SVOP-202ENST00000548229 C1orf167Q5SNV9 1468 aa24.23■■□□□ 1.47
SVOP-202ENST00000548229 EP400Q96L91 3159 aa24.23■■□□□ 1.47
SVOP-202ENST00000548229 PTCH1Q13635 1447 aa24.22■■□□□ 1.47
SVOP-202ENST00000548229 CCDC125Q86Z20 511 aa24.22■■□□□ 1.47
SVOP-202ENST00000548229 FNBP4Q8N3X1 1017 aaPredicted RBP24.22■■□□□ 1.47
SVOP-202ENST00000548229 SPHKAPQ2M3C7 1700 aa24.2■■□□□ 1.46
SVOP-202ENST00000548229 LAMC1P11047 1609 aa24.2■■□□□ 1.46
SVOP-202ENST00000548229 NALCNQ8IZF0 1738 aa24.19■■□□□ 1.46
SVOP-202ENST00000548229 VGFO15240 615 aaPredicted RBP24.17■■□□□ 1.46
SVOP-202ENST00000548229 ORAI2Q96SN7 254 aa24.16■■□□□ 1.46
SVOP-202ENST00000548229 ATRNO75882 1429 aa24.14■■□□□ 1.45
SVOP-202ENST00000548229 NEXMIFQ5QGS0 1516 aa24.14■■□□□ 1.45
SVOP-202ENST00000548229 ITGAEP38570 1179 aa24.13■■□□□ 1.45
SVOP-202ENST00000548229 NPHP3Q7Z494 1330 aa24.11■■□□□ 1.45
SVOP-202ENST00000548229 ROBO2Q9HCK4 1378 aa24.1■■□□□ 1.45
SVOP-202ENST00000548229 HFM1A2PYH4 1435 aa24.1■■□□□ 1.45
SVOP-202ENST00000548229 PRAG1Q86YV5 1406 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms