RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 NWD1Q149M9 1564 aa31.34■■■□□ 2.61
SSH1-207ENST00000547862 ITGAEP38570 1179 aa31.34■■■□□ 2.61
SSH1-207ENST00000547862 SLC52A1Q9NWF4 448 aa31.34■■■□□ 2.61
SSH1-207ENST00000547862 TMEM94Q12767 1356 aa31.33■■■□□ 2.61
SSH1-207ENST00000547862 PHF23Q9BUL5 403 aaPredicted RBP31.33■■■□□ 2.61
SSH1-207ENST00000547862 RBM33Q96EV2 1170 aaKnown RBP31.31■■■□□ 2.6
SSH1-207ENST00000547862 RIMS2Q9UQ26 1411 aa31.3■■■□□ 2.6
SSH1-207ENST00000547862 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
SSH1-207ENST00000547862 CHGAP10645 457 aaKnown RBP31.29■■■□□ 2.6
SSH1-207ENST00000547862 ZFYVE9O95405 1425 aa31.29■■■□□ 2.6
SSH1-207ENST00000547862 ROCK1Q13464 1354 aa31.29■■■□□ 2.6
SSH1-207ENST00000547862 NKTRP30414 1462 aaKnown RBP31.28■■■□□ 2.6
SSH1-207ENST00000547862 KCNA6P17658 529 aa31.28■■■□□ 2.6
SSH1-207ENST00000547862 ROBO1Q9Y6N7 1651 aa31.28■■■□□ 2.6
SSH1-207ENST00000547862 PROSER2Q86WR7 435 aaPredicted RBP31.27■■■□□ 2.6
SSH1-207ENST00000547862 CHD2O14647 1828 aaKnown RBP31.26■■■□□ 2.59
SSH1-207ENST00000547862 PLEKHG1Q9ULL1 1385 aa31.23■■■□□ 2.59
SSH1-207ENST00000547862 NUTM2DQ5VT03 806 aaPredicted RBP31.2■■■□□ 2.59
SSH1-207ENST00000547862 NUP155O75694 1391 aa31.19■■■□□ 2.58
SSH1-207ENST00000547862 SPHKAPQ2M3C7 1700 aa31.18■■■□□ 2.58
SSH1-207ENST00000547862 MSH6P52701 1360 aa31.16■■■□□ 2.58
SSH1-207ENST00000547862 FAM135BQ49AJ0 1406 aa31.15■■■□□ 2.58
SSH1-207ENST00000547862 HDGFP51858 240 aaKnown RBP31.13■■■□□ 2.57
SSH1-207ENST00000547862 DIP2AQ14689 1571 aa31.13■■■□□ 2.57
SSH1-207ENST00000547862 PHLPP1O60346 1717 aa31.12■■■□□ 2.57
SSH1-207ENST00000547862 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.1■■■□□ 2.57
SSH1-207ENST00000547862 ADAMTS13Q76LX8 1427 aa31.08■■■□□ 2.57
SSH1-207ENST00000547862 TRPM2O94759 1503 aa31.05■■■□□ 2.56
SSH1-207ENST00000547862 C14orf37Q86TY3 774 aa31.05■■■□□ 2.56
SSH1-207ENST00000547862 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.03■■■□□ 2.56
SSH1-207ENST00000547862 TBX22Q9Y458 520 aa31.02■■■□□ 2.56
SSH1-207ENST00000547862 NRXN3Q9Y4C0 1643 aa31.01■■■□□ 2.55
SSH1-207ENST00000547862 CLTCL1P53675 1640 aa31■■■□□ 2.55
SSH1-207ENST00000547862 SLAIN2Q9P270 581 aa30.98■■■□□ 2.55
SSH1-207ENST00000547862 RRBP1Q9P2E9 1410 aaKnown RBP30.97■■■□□ 2.55
SSH1-207ENST00000547862 COL16A1Q07092 1604 aaPredicted RBP30.96■■■□□ 2.55
SSH1-207ENST00000547862 ZNF326Q5BKZ1 582 aaKnown RBP30.96■■■□□ 2.55
SSH1-207ENST00000547862 KIF1BO60333 1816 aa30.96■■■□□ 2.55
SSH1-207ENST00000547862 RGS17Q9UGC6 210 aaPredicted RBP30.95■■■□□ 2.55
SSH1-207ENST00000547862 XRN1Q8IZH2 1706 aaKnown RBP30.94■■■□□ 2.54
SSH1-207ENST00000547862 PTPRUQ92729 1446 aa30.94■■■□□ 2.54
SSH1-207ENST00000547862 PIK3R4Q99570 1358 aa30.93■■■□□ 2.54
SSH1-207ENST00000547862 SETBP1Q9Y6X0 1596 aa30.93■■■□□ 2.54
SSH1-207ENST00000547862 NCOA3Q9Y6Q9 1424 aa30.9■■■□□ 2.54
SSH1-207ENST00000547862 NAIPQ13075 1403 aa30.9■■■□□ 2.54
SSH1-207ENST00000547862 AMOTL2Q9Y2J4 779 aa30.89■■■□□ 2.54
SSH1-207ENST00000547862 NEXMIFQ5QGS0 1516 aa30.88■■■□□ 2.53
SSH1-207ENST00000547862 ATF3P18847 181 aa30.87■■■□□ 2.53
SSH1-207ENST00000547862 JCADQ9P266 1359 aa30.87■■■□□ 2.53
SSH1-207ENST00000547862 AHDC1Q5TGY3 1603 aaPredicted RBP30.84■■■□□ 2.53
SSH1-207ENST00000547862 CADPS2Q86UW7 1296 aa30.84■■■□□ 2.53
SSH1-207ENST00000547862 SETD1AO15047 1707 aaKnown RBP30.83■■■□□ 2.53
SSH1-207ENST00000547862 POTEAQ6S8J7 498 aa30.82■■■□□ 2.52
SSH1-207ENST00000547862 C19orf44Q9H6X5 657 aa30.82■■■□□ 2.52
SSH1-207ENST00000547862 TRIM52Q96A61 297 aa30.81■■■□□ 2.52
SSH1-207ENST00000547862 NALCNQ8IZF0 1738 aa30.81■■■□□ 2.52
SSH1-207ENST00000547862 SHPRHQ149N8 1683 aa30.81■■■□□ 2.52
SSH1-207ENST00000547862 METP08581 1390 aa30.79■■■□□ 2.52
SSH1-207ENST00000547862 LRP6O75581 1613 aa30.78■■■□□ 2.52
SSH1-207ENST00000547862 HFM1A2PYH4 1435 aa30.76■■■□□ 2.51
SSH1-207ENST00000547862 DCCP43146 1447 aa30.75■■■□□ 2.51
SSH1-207ENST00000547862 ASXL1Q8IXJ9 1541 aa30.75■■■□□ 2.51
SSH1-207ENST00000547862 NHSL1Q5SYE7 1610 aa30.73■■■□□ 2.51
SSH1-207ENST00000547862 MEX3CQ5U5Q3 659 aaKnown RBP30.72■■■□□ 2.51
SSH1-207ENST00000547862 BRINP3Q76B58 766 aa30.72■■■□□ 2.51
SSH1-207ENST00000547862 PPLO60437 1756 aa30.71■■■□□ 2.51
SSH1-207ENST00000547862 MST1RQ04912 1400 aa30.71■■■□□ 2.51
SSH1-207ENST00000547862 ADGRL3Q9HAR2 1447 aa30.69■■■□□ 2.5
SSH1-207ENST00000547862 SLC4A1APQ9BWU0 796 aaKnown RBP30.68■■■□□ 2.5
SSH1-207ENST00000547862 SPATA31A6Q5VVP1 1343 aa30.68■■■□□ 2.5
SSH1-207ENST00000547862 NUTM2BA6NNL0 878 aaPredicted RBP30.62■■■□□ 2.49
SSH1-207ENST00000547862 NUTM2EB1AL46 878 aaPredicted RBP30.62■■■□□ 2.49
SSH1-207ENST00000547862 NUTM2AQ8IVF1 878 aaPredicted RBP30.62■■■□□ 2.49
SSH1-207ENST00000547862 FOXD1Q16676 465 aa30.6■■■□□ 2.49
SSH1-207ENST00000547862 PTCH1Q13635 1447 aa30.58■■■□□ 2.49
SSH1-207ENST00000547862 DDX17Q92841 729 aaKnown RBP30.58■■■□□ 2.49
SSH1-207ENST00000547862 VGFO15240 615 aaPredicted RBP30.57■■■□□ 2.48
SSH1-207ENST00000547862 ROBO2Q9HCK4 1378 aa30.55■■■□□ 2.48
SSH1-207ENST00000547862 SETD5Q9C0A6 1442 aa30.55■■■□□ 2.48
SSH1-207ENST00000547862 IFT172Q9UG01 1749 aa30.53■■■□□ 2.48
SSH1-207ENST00000547862 C1orf167Q5SNV9 1468 aa30.51■■■□□ 2.48
SSH1-207ENST00000547862 ZNF772Q68DY9 489 aaPredicted RBP30.51■■■□□ 2.47
SSH1-207ENST00000547862 RPGRIP1LQ68CZ1 1315 aa30.5■■■□□ 2.47
SSH1-207ENST00000547862 CCDC144AA2RUR9 1427 aa30.5■■■□□ 2.47
SSH1-207ENST00000547862 PNPLA6Q8IY17 1366 aa30.47■■■□□ 2.47
SSH1-207ENST00000547862 LRRC59Q96AG4 307 aaKnown RBP30.45■■■□□ 2.47
SSH1-207ENST00000547862 LAMC1P11047 1609 aa30.44■■■□□ 2.46
SSH1-207ENST00000547862 RGL3Q3MIN7 710 aa30.44■■■□□ 2.46
SSH1-207ENST00000547862 PRAG1Q86YV5 1406 aa30.44■■■□□ 2.46
SSH1-207ENST00000547862 AFF2P51816 1311 aa30.44■■■□□ 2.46
SSH1-207ENST00000547862 ADGRF5Q8IZF2 1346 aa30.42■■■□□ 2.46
SSH1-207ENST00000547862 CDC42BPGQ6DT37 1551 aa30.41■■■□□ 2.46
SSH1-207ENST00000547862 C8orf37Q96NL8 207 aa30.41■■■□□ 2.46
SSH1-207ENST00000547862 ORAI2Q96SN7 254 aa30.41■■■□□ 2.46
SSH1-207ENST00000547862 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.46
SSH1-207ENST00000547862 KNDC1Q76NI1 1749 aa30.39■■■□□ 2.46
SSH1-207ENST00000547862 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
SSH1-207ENST00000547862 RXRBP28702 533 aa30.37■■■□□ 2.45
SSH1-207ENST00000547862 STK26Q9P289 416 aa30.37■■■□□ 2.45
SSH1-207ENST00000547862 ADAMTS2O95450 1211 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms