RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
LETMD1-205ENST00000546992 L3MBTL2Q969R5 705 aa23.67■■□□□ 1.38
LETMD1-205ENST00000546992 MYOM2P54296 1465 aa23.67■■□□□ 1.38
LETMD1-205ENST00000546992 HSPA2P54652 639 aa23.66■■□□□ 1.38
LETMD1-205ENST00000546992 THEMISQ8N1K5 641 aaPredicted RBP23.65■■□□□ 1.38
LETMD1-205ENST00000546992 NRXN3Q9Y4C0 1643 aa23.65■■□□□ 1.38
LETMD1-205ENST00000546992 TONSLQ96HA7 1378 aa23.65■■□□□ 1.38
LETMD1-205ENST00000546992 IQGAP1P46940 1657 aa23.64■■□□□ 1.38
LETMD1-205ENST00000546992 NRXN1Q9ULB1 1477 aa23.63■■□□□ 1.37
LETMD1-205ENST00000546992 LTKP29376 864 aa23.63■■□□□ 1.37
LETMD1-205ENST00000546992 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
LETMD1-205ENST00000546992 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
LETMD1-205ENST00000546992 RPGRIP1LQ68CZ1 1315 aa23.62■■□□□ 1.37
LETMD1-205ENST00000546992 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
LETMD1-205ENST00000546992 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
LETMD1-205ENST00000546992 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
LETMD1-205ENST00000546992 SETBP1Q9Y6X0 1596 aa23.58■■□□□ 1.37
LETMD1-205ENST00000546992 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
LETMD1-205ENST00000546992 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
LETMD1-205ENST00000546992 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
LETMD1-205ENST00000546992 TRPM1Q7Z4N2 1603 aa23.56■■□□□ 1.36
LETMD1-205ENST00000546992 MED14O60244 1454 aa23.56■■□□□ 1.36
LETMD1-205ENST00000546992 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
LETMD1-205ENST00000546992 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
LETMD1-205ENST00000546992 NCKAP5LQ9HCH0 1330 aa23.55■■□□□ 1.36
LETMD1-205ENST00000546992 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
LETMD1-205ENST00000546992 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
LETMD1-205ENST00000546992 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
LETMD1-205ENST00000546992 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.53■■□□□ 1.36
LETMD1-205ENST00000546992 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
LETMD1-205ENST00000546992 LAMC1P11047 1609 aa23.52■■□□□ 1.36
LETMD1-205ENST00000546992 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
LETMD1-205ENST00000546992 ADAMTS13Q76LX8 1427 aa23.52■■□□□ 1.36
LETMD1-205ENST00000546992 NBPF8Q3BBV2 869 aa23.52■■□□□ 1.36
LETMD1-205ENST00000546992 ANKLE2Q86XL3 938 aa23.52■■□□□ 1.36
LETMD1-205ENST00000546992 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
LETMD1-205ENST00000546992 EID1Q9Y6B2 187 aa23.51■■□□□ 1.35
LETMD1-205ENST00000546992 NPHP4O75161 1426 aaPredicted RBP23.5■■□□□ 1.35
LETMD1-205ENST00000546992 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
LETMD1-205ENST00000546992 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
LETMD1-205ENST00000546992 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
LETMD1-205ENST00000546992 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
LETMD1-205ENST00000546992 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
LETMD1-205ENST00000546992 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
LETMD1-205ENST00000546992 RALGAPBQ86X10 1494 aa23.45■■□□□ 1.34
LETMD1-205ENST00000546992 CFAP70Q5T0N1 1121 aa23.43■■□□□ 1.34
LETMD1-205ENST00000546992 CHD2O14647 1828 aaKnown RBP23.41■■□□□ 1.34
LETMD1-205ENST00000546992 C14orf93Q9H972 538 aaKnown RBP23.41■■□□□ 1.34
LETMD1-205ENST00000546992 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
LETMD1-205ENST00000546992 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
LETMD1-205ENST00000546992 METP08581 1390 aa23.4■■□□□ 1.34
LETMD1-205ENST00000546992 XRN1Q8IZH2 1706 aaKnown RBP23.39■■□□□ 1.33
LETMD1-205ENST00000546992 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
LETMD1-205ENST00000546992 KNDC1Q76NI1 1749 aa23.38■■□□□ 1.33
LETMD1-205ENST00000546992 PTPRUQ92729 1446 aa23.37■■□□□ 1.33
LETMD1-205ENST00000546992 BCANQ96GW7 911 aa23.36■■□□□ 1.33
LETMD1-205ENST00000546992 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
LETMD1-205ENST00000546992 TBX22Q9Y458 520 aa23.35■■□□□ 1.33
LETMD1-205ENST00000546992 ARHGEF28Q8N1W1 1705 aaKnown RBP23.35■■□□□ 1.33
LETMD1-205ENST00000546992 GPRASP1Q5JY77 1395 aa23.35■■□□□ 1.33
LETMD1-205ENST00000546992 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
LETMD1-205ENST00000546992 ROCK2O75116 1388 aaKnown RBP23.32■■□□□ 1.32
LETMD1-205ENST00000546992 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
LETMD1-205ENST00000546992 YTHDC2Q9H6S0 1430 aaKnown RBP23.31■■□□□ 1.32
LETMD1-205ENST00000546992 PIK3R4Q99570 1358 aa23.29■■□□□ 1.32
LETMD1-205ENST00000546992 CPS1P31327 1500 aa23.29■■□□□ 1.32
LETMD1-205ENST00000546992 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.32
LETMD1-205ENST00000546992 TECPR2O15040 1411 aa23.26■■□□□ 1.31
LETMD1-205ENST00000546992 DLC1Q96QB1 1528 aa23.25■■□□□ 1.31
LETMD1-205ENST00000546992 XIRP1Q702N8 1843 aaKnown RBP23.24■■□□□ 1.31
LETMD1-205ENST00000546992 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
LETMD1-205ENST00000546992 ABCC11Q96J66 1382 aa23.23■■□□□ 1.31
LETMD1-205ENST00000546992 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
LETMD1-205ENST00000546992 STK26Q9P289 416 aa23.22■■□□□ 1.31
LETMD1-205ENST00000546992 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
LETMD1-205ENST00000546992 ROBO2Q9HCK4 1378 aa23.22■■□□□ 1.31
LETMD1-205ENST00000546992 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
LETMD1-205ENST00000546992 AMOTL2Q9Y2J4 779 aa23.21■■□□□ 1.31
LETMD1-205ENST00000546992 PTCH1Q13635 1447 aa23.21■■□□□ 1.31
LETMD1-205ENST00000546992 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
LETMD1-205ENST00000546992 LTBP4Q8N2S1 1624 aa23.2■■□□□ 1.3
LETMD1-205ENST00000546992 KCNA6P17658 529 aa23.2■■□□□ 1.3
LETMD1-205ENST00000546992 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
LETMD1-205ENST00000546992 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
LETMD1-205ENST00000546992 USP47Q96K76 1375 aa23.18■■□□□ 1.3
LETMD1-205ENST00000546992 PLEKHH1Q9ULM0 1364 aa23.18■■□□□ 1.3
LETMD1-205ENST00000546992 NALCNQ8IZF0 1738 aa23.18■■□□□ 1.3
LETMD1-205ENST00000546992 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
LETMD1-205ENST00000546992 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
LETMD1-205ENST00000546992 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
LETMD1-205ENST00000546992 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
LETMD1-205ENST00000546992 SIRT1Q96EB6 747 aa23.1■■□□□ 1.29
LETMD1-205ENST00000546992 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
LETMD1-205ENST00000546992 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
LETMD1-205ENST00000546992 HSPA5P11021 654 aaKnown RBP23.09■■□□□ 1.29
LETMD1-205ENST00000546992 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
LETMD1-205ENST00000546992 CENPJQ9HC77 1338 aaPredicted RBP23.08■■□□□ 1.28
LETMD1-205ENST00000546992 ST20-MTHFSA0A0A6YYL1 179 aa23.07■■□□□ 1.28
LETMD1-205ENST00000546992 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
LETMD1-205ENST00000546992 TULP4Q9NRJ4 1543 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms