RNA–Protein interactions for RNA: ENST00000546985.1

MSI1-203, Transcript of musashi RNA binding protein 1, humanhuman

TSL 2

Gene MSI1, Length 698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-203ENST00000546985 SLC52A1Q9NWF4 448 aa24.76■■□□□ 1.55
MSI1-203ENST00000546985 TMEM94Q12767 1356 aa24.76■■□□□ 1.55
MSI1-203ENST00000546985 IQGAP3Q86VI3 1631 aa24.74■■□□□ 1.55
MSI1-203ENST00000546985 STAG3Q9UJ98 1225 aa24.71■■□□□ 1.55
MSI1-203ENST00000546985 PLEKHG1Q9ULL1 1385 aa24.69■■□□□ 1.54
MSI1-203ENST00000546985 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
MSI1-203ENST00000546985 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
MSI1-203ENST00000546985 RGS17Q9UGC6 210 aaPredicted RBP24.67■■□□□ 1.54
MSI1-203ENST00000546985 SLC26A8Q96RN1 970 aa24.66■■□□□ 1.54
MSI1-203ENST00000546985 ROCK1Q13464 1354 aa24.66■■□□□ 1.54
MSI1-203ENST00000546985 RIMS2Q9UQ26 1411 aa24.64■■□□□ 1.54
MSI1-203ENST00000546985 PHLPP1O60346 1717 aa24.64■■□□□ 1.53
MSI1-203ENST00000546985 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
MSI1-203ENST00000546985 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
MSI1-203ENST00000546985 ADAMTS13Q76LX8 1427 aa24.61■■□□□ 1.53
MSI1-203ENST00000546985 PROSER2Q86WR7 435 aaPredicted RBP24.6■■□□□ 1.53
MSI1-203ENST00000546985 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
MSI1-203ENST00000546985 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.53
MSI1-203ENST00000546985 MSH6P52701 1360 aa24.58■■□□□ 1.53
MSI1-203ENST00000546985 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
MSI1-203ENST00000546985 SPHKAPQ2M3C7 1700 aa24.57■■□□□ 1.52
MSI1-203ENST00000546985 NRXN3Q9Y4C0 1643 aa24.57■■□□□ 1.52
MSI1-203ENST00000546985 PIK3R4Q99570 1358 aa24.56■■□□□ 1.52
MSI1-203ENST00000546985 TBX22Q9Y458 520 aa24.56■■□□□ 1.52
MSI1-203ENST00000546985 RBM33Q96EV2 1170 aaKnown RBP24.54■■□□□ 1.52
MSI1-203ENST00000546985 XRN1Q8IZH2 1706 aaKnown RBP24.54■■□□□ 1.52
MSI1-203ENST00000546985 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
MSI1-203ENST00000546985 TRPM2O94759 1503 aa24.52■■□□□ 1.52
MSI1-203ENST00000546985 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
MSI1-203ENST00000546985 SHPRHQ149N8 1683 aa24.52■■□□□ 1.52
MSI1-203ENST00000546985 SETBP1Q9Y6X0 1596 aa24.5■■□□□ 1.51
MSI1-203ENST00000546985 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.5■■□□□ 1.51
MSI1-203ENST00000546985 SLAIN2Q9P270 581 aa24.5■■□□□ 1.51
MSI1-203ENST00000546985 JCADQ9P266 1359 aa24.47■■□□□ 1.51
MSI1-203ENST00000546985 POTEAQ6S8J7 498 aa24.46■■□□□ 1.51
MSI1-203ENST00000546985 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.5
MSI1-203ENST00000546985 PTPRUQ92729 1446 aa24.44■■□□□ 1.5
MSI1-203ENST00000546985 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
MSI1-203ENST00000546985 BCANQ96GW7 911 aa24.43■■□□□ 1.5
MSI1-203ENST00000546985 DCCP43146 1447 aa24.43■■□□□ 1.5
MSI1-203ENST00000546985 NUP155O75694 1391 aa24.42■■□□□ 1.5
MSI1-203ENST00000546985 LRP6O75581 1613 aa24.42■■□□□ 1.5
MSI1-203ENST00000546985 NHSL1Q5SYE7 1610 aa24.42■■□□□ 1.5
MSI1-203ENST00000546985 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
MSI1-203ENST00000546985 NEXMIFQ5QGS0 1516 aa24.39■■□□□ 1.49
MSI1-203ENST00000546985 KIF1BO60333 1816 aa24.38■■□□□ 1.49
MSI1-203ENST00000546985 C19orf44Q9H6X5 657 aa24.38■■□□□ 1.49
MSI1-203ENST00000546985 CADPS2Q86UW7 1296 aa24.37■■□□□ 1.49
MSI1-203ENST00000546985 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
MSI1-203ENST00000546985 CHGAP10645 457 aaKnown RBP24.35■■□□□ 1.49
MSI1-203ENST00000546985 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
MSI1-203ENST00000546985 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
MSI1-203ENST00000546985 ASXL1Q8IXJ9 1541 aa24.33■■□□□ 1.49
MSI1-203ENST00000546985 LAMC1P11047 1609 aa24.32■■□□□ 1.48
MSI1-203ENST00000546985 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
MSI1-203ENST00000546985 MST1RQ04912 1400 aa24.31■■□□□ 1.48
MSI1-203ENST00000546985 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
MSI1-203ENST00000546985 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
MSI1-203ENST00000546985 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
MSI1-203ENST00000546985 ATF3P18847 181 aa24.27■■□□□ 1.48
MSI1-203ENST00000546985 BRINP3Q76B58 766 aa24.27■■□□□ 1.48
MSI1-203ENST00000546985 METP08581 1390 aa24.27■■□□□ 1.48
MSI1-203ENST00000546985 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
MSI1-203ENST00000546985 NAIPQ13075 1403 aa24.26■■□□□ 1.47
MSI1-203ENST00000546985 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
MSI1-203ENST00000546985 PPLO60437 1756 aa24.24■■□□□ 1.47
MSI1-203ENST00000546985 CDK12Q9NYV4 1490 aaPredicted RBP24.21■■□□□ 1.47
MSI1-203ENST00000546985 PTCH1Q13635 1447 aa24.21■■□□□ 1.47
MSI1-203ENST00000546985 ITGAEP38570 1179 aa24.2■■□□□ 1.46
MSI1-203ENST00000546985 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
MSI1-203ENST00000546985 HFM1A2PYH4 1435 aa24.16■■□□□ 1.46
MSI1-203ENST00000546985 IFT172Q9UG01 1749 aa24.13■■□□□ 1.45
MSI1-203ENST00000546985 ZNF326Q5BKZ1 582 aaKnown RBP24.13■■□□□ 1.45
MSI1-203ENST00000546985 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
MSI1-203ENST00000546985 C1orf167Q5SNV9 1468 aa24.12■■□□□ 1.45
MSI1-203ENST00000546985 COL22A1Q8NFW1 1626 aaPredicted RBP24.11■■□□□ 1.45
MSI1-203ENST00000546985 MEX3CQ5U5Q3 659 aaKnown RBP24.1■■□□□ 1.45
MSI1-203ENST00000546985 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
MSI1-203ENST00000546985 LRRC59Q96AG4 307 aaKnown RBP24.08■■□□□ 1.45
MSI1-203ENST00000546985 CDC42BPGQ6DT37 1551 aa24.08■■□□□ 1.44
MSI1-203ENST00000546985 ROBO2Q9HCK4 1378 aa24.07■■□□□ 1.44
MSI1-203ENST00000546985 UPF1Q92900 1129 aaKnown RBP eCLIP24.06■■□□□ 1.44
MSI1-203ENST00000546985 KNDC1Q76NI1 1749 aa24.06■■□□□ 1.44
MSI1-203ENST00000546985 RPGRIP1LQ68CZ1 1315 aa24.06■■□□□ 1.44
MSI1-203ENST00000546985 MARF1Q9Y4F3 1742 aaKnown RBP24.05■■□□□ 1.44
MSI1-203ENST00000546985 VGFO15240 615 aaPredicted RBP24.04■■□□□ 1.44
MSI1-203ENST00000546985 AFF2P51816 1311 aa24.04■■□□□ 1.44
MSI1-203ENST00000546985 SOS2Q07890 1332 aaPredicted RBP24.03■■□□□ 1.44
MSI1-203ENST00000546985 RXRBP28702 533 aa24.02■■□□□ 1.44
MSI1-203ENST00000546985 RGS12O14924 1447 aa24.01■■□□□ 1.43
MSI1-203ENST00000546985 DDX17Q92841 729 aaKnown RBP24■■□□□ 1.43
MSI1-203ENST00000546985 TECPR2O15040 1411 aa24■■□□□ 1.43
MSI1-203ENST00000546985 NUTM2BA6NNL0 878 aaPredicted RBP23.99■■□□□ 1.43
MSI1-203ENST00000546985 NUTM2EB1AL46 878 aaPredicted RBP23.99■■□□□ 1.43
MSI1-203ENST00000546985 NUTM2AQ8IVF1 878 aaPredicted RBP23.99■■□□□ 1.43
MSI1-203ENST00000546985 TRIM52Q96A61 297 aa23.99■■□□□ 1.43
MSI1-203ENST00000546985 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
MSI1-203ENST00000546985 PXDNQ92626 1479 aa23.95■■□□□ 1.42
MSI1-203ENST00000546985 MYOM2P54296 1465 aa23.94■■□□□ 1.42
MSI1-203ENST00000546985 FMN2Q9NZ56 1722 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms